Microbacteriaceae

Microbacteriaceae
	Microbacterium gubbeenense on agar plate
Scientific classification
Domain:	Bacteria
Phylum:	Actinomycetota
Class:	Actinomycetia
Order:	Micrococcales
Family:	Microbacteriaceae ; Park et al. 1995
Type genus
	Microbacterium ; Orla-Jensen 1919 (Approved Lists 1980)
Genera
	See text.

Last updated October 16, 2023

Microbacteriaceae is a family of bacteria of the order Actinomycetales.^[1] They are Gram-positive soil organisms.

Genera

The family Microbacteriaceae comprises the following genera:^[2]

Agreia Evtushenko et al. 2001
Agrococcus Groth et al. 1996
Agromyces Gledhill and Casida 1969 (Approved Lists 1980)
Allohumibacter Kim et al. 2016
Alpinimonas Schumann et al. 2012
Amnibacterium Kim and Lee 2011
Arenivirga Hamada et al. 2017
Aurantimicrobium Nakai et al. 2015
Canibacter Aravena-Román et al. 2014
Clavibacter Davis et al. 1984
Cnuibacter Zhou et al. 2016
Compostimonas Kim et al. 2012
Conyzicola Kim et al. 2014
" Crocebacterium " Rogers & Doran-Peterson 2006
Cryobacterium Suzuki et al. 1997
" Cryocola " Gavrish et al. 2003
Curtobacterium Yamada and Komagata 1972 (Approved Lists 1980)
Diaminobutyricibacter Kim et al. 2014
Diaminobutyricimonas Jang et al. 2013
Frigoribacterium Kämpfer et al. 2000
Frondihabitans Greene et al. 2009
Galbitalea Kim et al. 2014
Glaciibacter Katayama et al. 2009
Glaciihabitans Li et al. 2014
Gryllotalpicola Kim et al. 2012
Gulosibacter Manaia et al. 2004
Herbiconiux Behrendt et al. 2011
Homoserinibacter Kim et al. 2014
Homoserinimonas Kim et al. 2012
Huakuichenia Zhang et al. 2016
Humibacter Vaz-Moreira et al. 2008
Klugiella Cook et al. 2008
Labedella Lee 2007
Lacisediminihabitans Zhuo et al. 2020
Leifsonia Evtushenko et al. 2000
Leucobacter Takeuchi et al. 1996
" Luethyella " O'Neal et al. 2017
"Candidatus Lumbricidiphila" corrig. Lund et al. 2018
Lysinibacter Tuo et al. 2015
Lysinimonas Jang et al. 2013
" Marinisubtilis " Qin et al. 2021
Marisediminicola Li et al. 2010
Microbacterium Orla-Jensen 1919 (Approved Lists 1980)
Microcella Tiago et al. 2005
Microterricola Matsumoto et al. 2008
Mycetocola Tsukamoto et al. 2001
Naasia Weon et al. 2013
Okibacterium Evtushenko et al. 2002
Parafrigoribacterium Kong et al. 2016
Planctomonas Liu et al. 2019
"Candidatus Planktoluna" Hahn 2009
Plantibacter Behrendt et al. 2002
Pontimonas Jang et al. 2013
Protaetiibacter Heo et al. 2019
Pseudoclavibacter Manaia et al. 2004
Pseudolysinimonas Heo et al. 2019
Puzihella Sheu et al. 2017
Rathayibacter Zgurskaya et al. 1993
Rhodoglobus Sheridan et al. 2003
Rhodoluna Hahn et al. 2014
Rudaibacter Kim et al. 2013
Salinibacterium Han et al. 2003
Schumannella An et al. 2009
Subtercola Männistö et al. 2000
Terrimesophilobacter Hahn et al. 2021

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature ^[2] and the phylogeny is based on whole-genome sequences.^[3]^{[lower-alpha 1]}

Microbacteriaceae

outgroup

" Tropherymataceae "

Notes

↑ Allohumibacter, Alpinimonas, Amnibacterium, Arenivirga, Canibacter, Chryseoglobus, Compostimonas, Conyzicola, Diaminobutyricibacter, Diaminobutyricimonas, Frigoribacterium, Frondihabitans, Galbitalea, Glaciihabitans, Homoserinibacter, Homoserinimonas, Huakuichenia, Klugiella, Labedella, Lacisediminihabitans, Lysinibacter, Lysinimonas, Marisediminicola, Microcella, Naasia, Parafrigoribacterium, Planctomonas, Pontimonas, Protaetiibacter, Pseudolysinimonas, Puzihella, Rhodoglobus, Rudaibacter, Schumannella, and Subtercola are not included in this phylogenetic tree.

Related Research Articles

Micromonosporaceae is a family of bacteria of the class Actinomycetia. They are gram-positive, spore-forming soil organisms that form a true mycelium.

The family Micrococcaceae includes bacterial genera of Gram positive cocci that inhabit the air and skin, such as Micrococcus luteus.

The Actinomycetia are a class of bacteria.

<span class="mw-page-title-main">Alphaproteobacteria</span> Class of bacteria

Alphaproteobacteria is a class of bacteria in the phylum Pseudomonadota. The Magnetococcales and Mariprofundales are considered basal or sister to the Alphaproteobacteria. The Alphaproteobacteria are highly diverse and possess few commonalities, but nevertheless share a common ancestor. Like all Proteobacteria, its members are gram-negative and some of its intracellular parasitic members lack peptidoglycan and are consequently gram variable.

The family Flavobacteriaceae is composed of environmental bacteria. Most species are aerobic, while some are microaerobic to anaerobic; for example Capnocytophaga and Coenonia.

The Actinomycetaceae are a family of bacteria in the order Actinomycetales that contains the medically important genus Actinomyces. These organisms are closely related to the mycobacteria, but were originally classified as fungi because they were thought to be transitional forms between bacteria and fungi.

The Pseudonocardiaceae are a family of bacteria in the order Actinomycetales and the only member of the suborder Pseudonocardineae.

Leifsonia is a Gram-positive genus of bacteria from the family Microbacteriaceae.

The Glycomycetaceae are a family of bacteria.

Chloroflexales is an order of bacteria in the class Chloroflexia. The clade is also known as filamentous anoxygenic phototrophic bacteria (FAP), as the order contains phototrophs that do not produce oxygen. These bacteria are facultative aerobic. They generally use chemotrophy when oxygen is present and switch to light-derived energy when otherwise. Most species are heterotrophs, but a few are capable of photoautotrophy.

Leucobacter is a bacterial genus from the family Microbacteriaceae.

Rubrobacteria is a class of Actinomycetota.

The Acidimicrobiia are a class of Actinomycetota, in which three families, eight genera, and nine species have been described, Acidimicrobium ferrooxidans is the type species of the order.

Frigoribacterium is a Gram-positive, non-spore-forming and motile genus of bacteria from the family of Microbacteriaceae.

Frondihabitans is a Gram-positive, non-spore-forming and non-motil genus of bacteria from the family of Microbacteriaceae.

Gulosibacter is a Gram-positive, strictly aerobic, non-spore-forming and non-motile genus of bacteria from the family Microbacteriaceae.

Herbiconiux is a Gram-positive, non-spore-forming, endophytic, obligatory aerobic and non-motile genus of bacteria from the family Microbacteriaceae.

Plantibacter is a Gram-positive, non-spore-forming and non-motile genus of bacteria from the family of Microbacteriaceae.

Plantibacter flavus is a bacterium from the genus Plantibacter which has been isolated from the phyllosphere of grass from Paulinenaue in Germany.

The Streptosporangiales are an order of bacteria.

References

1 2 Park YH, Suzuki K, Yim DG, Lee KC, Kim E, Yoon J, Kim S, Kho YH, Goodfellow M, Komagata K (1993). "Suprageneric classification of peptidoglycan group B actinomycetes by nucleotide sequencing of 5S ribosomal RNA". Antonie van Leeuwenhoek. 64 (3–4): 307–313. doi:10.1007/BF00873089. PMID 8085792. S2CID 32811031.
1 2 Euzéby JP, Parte AC. "Microbacteriaceae". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved May 28, 2022.
↑ Nouioui I, Carro L, García-López M, Meier-Kolthoff JP, Woyke T, Kyrpides NC, Pukall R, Klenk HP, Goodfellow M, Markus Göker M (2018). "Genome-Based Taxonomic Classification of the Phylum Actinobacteria". Front. Microbiol. 9: 2007. doi: 10.3389/fmicb.2018.02007 . PMC 6113628 . PMID 30186281.

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[4] Allohumibacter, Alpinimonas, Amnibacterium, Arenivirga, Canibacter, Chryseoglobus, Compostimonas, Conyzicola, Diaminobutyricibacter, Diaminobutyricimonas, Frigoribacterium, Frondihabitans, Galbitalea, Glaciihabitans, Homoserinibacter, Homoserinimonas, Huakuichenia, Klugiella, Labedella, Lacisediminihabitans, Lysinibacter, Lysinimonas, Marisediminicola, Microcella, Naasia, Parafrigoribacterium, Planctomonas, Pontimonas, Protaetiibacter, Pseudolysinimonas, Puzihella, Rhodoglobus, Rudaibacter, Schumannella, and Subtercola are not included in this phylogenetic tree.

[Park-1] 1 2 Park YH, Suzuki K, Yim DG, Lee KC, Kim E, Yoon J, Kim S, Kho YH, Goodfellow M, Komagata K (1993). "Suprageneric classification of peptidoglycan group B actinomycetes by nucleotide sequencing of 5S ribosomal RNA". Antonie van Leeuwenhoek. 64 (3–4): 307–313. doi:10.1007/BF00873089. PMID 8085792. S2CID 32811031.

[LPSN-2] 1 2 Euzéby JP, Parte AC. "Microbacteriaceae". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved May 28, 2022.

[Nouioui-3] Nouioui I, Carro L, García-López M, Meier-Kolthoff JP, Woyke T, Kyrpides NC, Pukall R, Klenk HP, Goodfellow M, Markus Göker M (2018). "Genome-Based Taxonomic Classification of the Phylum Actinobacteria". Front. Microbiol. 9: 2007. doi: 10.3389/fmicb.2018.02007 . PMC 6113628 . PMID 30186281.

[1]

[2]

[3]

[lower-alpha 1]

Microbacteriaceae

Microbacterium gubbeenense on agar plate
Scientific classification
Domain:	Bacteria
Phylum:	Actinomycetota
Class:	Actinomycetia
Order:	Micrococcales
Family:	Microbacteriaceae Park et al. 1995^[1]
Type genus
Microbacterium Orla-Jensen 1919 (Approved Lists 1980)
Genera
See text.