Actinomycetales

Last updated

Actinomycetales
Actinomyces israelii.jpg
Scanning electron micrograph of Actinomyces israelii.
Scientific classification OOjs UI icon edit-ltr.svg
Domain: Bacteria
Phylum: Actinomycetota
Class: Actinomycetia
Order: Actinomycetales
Buchanan 1917 (Approved Lists 1980) [1]
Type genus
Actinomyces
Harz 1877 (Approved Lists 1980)
Families [2]
Synonyms
  • "Actinobacteriales" Prévot 1946
  • Actinomycetineae Stackebrandt, Rainey & Ward-Rainey 1997

The Actinomycetales is an order of Actinomycetota. A member of the order is often called an actinomycete. Actinomycetales are generally gram-positive and anaerobic and have mycelia in a filamentous and branching growth pattern. Some actinomycetes can form rod- or coccoid-shaped forms, while others can form spores on aerial hyphae. Actinomycetales bacteria can be infected by bacteriophages, which are called actinophages. Actinomycetales can range from harmless bacteria to pathogens with resistance to antibiotics.

Contents

Reproduction

Actinomycetales have 2 main forms of reproduction: spore formation and hyphae fragmentation. During reproduction, Actinomycetales can form conidiophores, sporangiospores, and oidiospores. In reproducing through hyphae fragmentation, the hyphae formed by Actinomycetales can be a fifth to half the size of fungal hyphae, and bear long spore chains.

Presence and associations

Actinomycetales can be found mostly in soil and decaying organic matter, as well as in living organisms such as humans and animals. They form symbiotic nitrogen fixing associations with over 200 species of plants, and can also serve as growth promoting or biocontrol agents, or cause disease in some species of plants. Actinomycetales can be found in the human urogenital tract as well as in the digestive system including the mouth, throat, and gastrointestinal tract in the form of Helicobacter without causing disease in the host. They also have wide medicinal and botanical applications, and are used as a source of many antibiotics and pesticides.

Antimicrobial properties

Many species of Actinomycetes produce antimicrobial compounds under certain conditions and growth media. Streptomycin, actinomycin, and streptothricin are all medically important antibiotics isolated from Actinomycetes bacteria. [3] Almost two-thirds of the natural antimicrobial drug compounds used currently are produced by different species of Actinomycetes. [4]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) [2] and National Center for Biotechnology Information (NCBI) [5]

Whole-genome based phylogeny [6] 16S rRNA based LTP_08_2023 [7] [8] [9] 120 marker proteins based GTDB 08-RS214 [10] [11] [12]

See also

Related Research Articles

<span class="mw-page-title-main">Actinomycetota</span> Phylum of bacteria

The Actinomycetota are a diverse phylum of Gram-positive bacteria with high GC content. They can be terrestrial or aquatic. They are of great importance to land flora because of their contributions to soil systems. In soil they help to decompose the organic matter of dead organisms so the molecules can be taken up anew by plants. While this role is also played by fungi, Actinomycetota are much smaller and likely do not occupy the same ecological niche. In this role the colonies often grow extensive mycelia, as fungi do, and the name of an important order of the phylum, Actinomycetales, reflects that they were long believed to be fungi. Some soil actinomycetota live symbiotically with the plants whose roots pervade the soil, fixing nitrogen for the plants in exchange for access to some of the plant's saccharides. Other species, such as many members of the genus Mycobacterium, are important pathogens.

<span class="mw-page-title-main">Fusobacteriota</span> Phylum of Gram-negative bacteria

Fusobacteriota are obligately anaerobic non-sporeforming Gram-negative bacilli. Since the first reports in the late nineteenth century, various names have been applied to these organisms, sometimes with the same name being applied to different species. More recently, not only have there been changes to the nomenclature, but also attempts to differentiate between species which are believed to be either pathogenic or commensal or both. Because of their asaccharolytic nature, and a general paucity of positive results in routine biochemical tests, laboratory identification of the Fusobacteriota has been difficult. However, the application of novel molecular biological techniques to taxonomy has established a number of new species, together with the subspeciation of Fusobacterium necrophorum and F. nucleatum, and provided new methods for identification. The involvement of Fusobacteriota in a wide spectrum of human infections causing tissue necrosis and septicaemia has long been recognised, and, more recently, their importance in intra-amniotic infections, premature labour and tropical ulcers has been reported.

<span class="mw-page-title-main">Micromonosporaceae</span> Family of bacteria

Micromonosporaceae is a family of bacteria of the class Actinomycetia. They are gram-positive, spore-forming soil organisms that form a true mycelium.

<i>Frankia</i> Genus of bacteria

Frankia is a genus of nitrogen-fixing bacteria that live in symbiosis with actinorhizal plants, similar to the Rhizobium bacteria found in the root nodules of legumes in the family Fabaceae. Frankia also initiate the forming of root nodules.

<span class="mw-page-title-main">Thermoplasmatales</span> Order of archaea

In taxonomy, the Thermoplasmatales are an order of the Thermoplasmata. All are acidophiles, growing optimally at pH below 2. Picrophilus is currently the most acidophilic of all known organisms, being capable of growing at a pH of -0.06. Many of these organisms do not contain a cell wall, although this is not true in the case of Picrophilus. Most members of the Thermotoplasmata are thermophilic.

<span class="mw-page-title-main">Actinomycetia</span> Class of bacteria

The Actinomycetia are a class of bacteria.

<span class="mw-page-title-main">Streptomycetaceae</span> Family of bacteria

Streptomycetaceae is a family of the class Actinomycetota, making up the monotypic order Streptomycetales. It includes the important genus Streptomyces. This was the original source of many antibiotics, namely streptomycin, the first antibiotic against tuberculosis.

The Negativicutes are a class of bacteria in the phylum Bacillota, whose members have a peculiar cell wall with a lipopolysaccharide outer membrane which stains gram-negative, unlike most other members of the Bacillota. Although several neighbouring Clostridia species also stain gram-negative, the proteins responsible for the unusual diderm structure of the Negativicutes may have actually been laterally acquired from Pseudomonadota. Additional research is required to confirm the origin of the diderm cell envelope in the Negativicutes.

Acrocarpospora is a genus of bacteria in the phylum Actinomycetota. The major respiratory quinone is menaquinone MK-9(H ) and use madurose, an actinomycete whole-cell sugar.

Actinocatenispora is a genus in the phylum Actinomycetota (Bacteria).

Actinocorallia is a genus in the phylum Actinomycetota (Bacteria).

Actinospica is a genus in the phylum Actinomycetota (Bacteria).

Cryptosporangium is a genus of bacteria in the phylum Actinomycetota.

Desulfosporosinus is a genus of strictly anaerobic, sulfate-reducing bacteria, often found in soil.

Bulleidia is a Gram-positive, non-spore-forming, anaerobic and non-motile genus from the family of Erysipelotrichidae, with one known species.

Sphaerisporangium is a Gram-positive genus of bacteria from the family of Streptosporangiaceae.

Marinactinospora is a genus in the phylum Actinomycetota (Bacteria). It contains a single species, Marinactinospora thermotolerans. The species has a high tolerance for environmental temperatures, up to 55°C.

Tumebacillus is a genus of Gram-positive, rod-shaped, spore-forming bacteria. Members of the genus can be motile or non-motile, and form white or yellow colonies on R2A agar.

Catenulispora is a Gram-positive, rod-shaped and aerobic genus of bacteria.

Euzebya is a genus of Gram-positive bacteria.

References

  1. Buchanan RE (1917). "Studies in the Nomenclature and Classification of the Bacteria: II. The Primary Subdivisions of the Schizomycetes". J Bacteriol. 2: 155–164. doi:10.1128/jb.2.2.155-164.1917. PMC   378699 . PMID   16558735.
  2. 1 2 A.C. Parte; et al. "Actinomycetales". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2023-09-09.
  3. Waksman, Selman A.; Schatz, Albert; Reynolds, Donald M. (December 2010). "Production of antibiotic substances by Actinomycetes". Annals of the New York Academy of Sciences. 1213 (1): 112–124. doi: 10.1111/j.1749-6632.2010.05861.x . PMID   21175680.
  4. Bentley, S. D.; Chater, K. F.; Cerdeño-Tárraga, A.-M.; Challis, G. L.; Thomson, N. R.; James, K. D.; Harris, D. E.; Quail, M. A.; Kieser, H.; Harper, D.; Bateman, A.; Brown, S.; Chandra, G.; Chen, C. W.; Collins, M.; Cronin, A.; Fraser, A.; Goble, A.; Hidalgo, J.; Hornsby, T.; Howarth, S.; Huang, C.-H.; Kieser, T.; Larke, L.; Murphy, L.; Oliver, K.; O'Neil, S.; Rabbinowitsch, E.; Rajandream, M.-A.; Rutherford, K.; Rutter, S.; Seeger, K.; Saunders, D.; Sharp, S.; Squares, R.; Squares, S.; Taylor, K.; Warren, T.; Wietzorrek, A.; Woodward, J.; Barrell, B. G.; Parkhill, J.; Hopwood, D. A. (9 May 2002). "Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2)". Nature. 417 (6885): 141–147. doi: 10.1038/417141a . PMID   12000953.
  5. Sayers; et al. "Actinomycetales". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2023-09-09.
  6. Nouioui I, Carro L, García-López M, Meier-Kolthoff JP, Woyke T, Kyrpides NC, Pukall R, Klenk HP, Goodfellow M, Markus Göker M (2018). "Genome-Based Taxonomic Classification of the Phylum Actinobacteria". Front. Microbiol. 9: 2007. doi: 10.3389/fmicb.2018.02007 . PMC   6113628 . PMID   30186281.
  7. "The LTP" . Retrieved 20 November 2023.
  8. "LTP_all tree in newick format" . Retrieved 20 November 2023.
  9. "LTP_08_2023 Release Notes" (PDF). Retrieved 20 November 2023.
  10. "GTDB release 08-RS214". Genome Taxonomy Database . Retrieved 10 May 2023.
  11. "bac120_r214.sp_label". Genome Taxonomy Database . Retrieved 10 May 2023.
  12. "Taxon History". Genome Taxonomy Database . Retrieved 10 May 2023.