BOP1

Last updated
BOP1
Identifiers
Aliases BOP1 , block of proliferation 1, BOP1 ribosomal biogenesis factor
External IDs OMIM: 610596 MGI: 1334460 HomoloGene: 6612 GeneCards: BOP1
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_015201

NM_013481

RefSeq (protein)

NP_056016

NP_038509

Location (UCSC) Chr 8: 144.26 – 144.29 Mb Chr 15: 76.34 – 76.36 Mb
PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Ribosome biogenesis protein BOP1 is a protein that in humans is encoded by the BOP1 gene. [5] [6] It is a WD40 repeat-containing nucleolar protein involved in rRNA processing, thereby controlling the cell cycle. [7] It is required for the maturation of the 25S and 5.8S ribosomal RNAs. It may serve as an essential factor in ribosome formation that coordinates processing of the spacer regions in pre-rRNA.

Contents

Function

The Pes1-Bop1 complex has several components: BOP1, GRWD1, PES1, ORC6L, and RPL3 and is involved in ribosome biogenesis and altered chromosome segregation. The overexpression of BOP1 increases the percentage of multipolar spindles in human cells. Deregulation of the BOP1 pathway may contribute to colorectal tumourigenesis in humans. [8] Elevated levels of Bop1 induces Bop1/WDR12 and Bop1/Pes1 subcomplexes and the assembly and integrity of the PeBoW complex is highly sensitive to changes in Bop1 protein levels. [9]

Nop7p-Erb1p-Ytm1p, found in yeast, is potentially the homologous complex of Pes1-Bop1-WDR12 as it is involved in the control of ribosome biogenesis and S phase entry. The integrity of the PeBoW complex is required for ribosome biogenesis and cell proliferation in mammalian cells. [10] In Giardia, the species specific cytoskeleton protein, beta-giardin, interacts with Bop1. [7]

Structure

BOP1NT
Identifiers
SymbolBOP1NT
Pfam PF08145
InterPro IPR012953
Available protein structures:
Pfam   structures / ECOD  
PDB RCSB PDB; PDBe; PDBj
PDBsum structure summary

BOP1 contains a conserved N-terminal domain, BOP1NT.

Related Research Articles

Erb1 also known as the eukaryotic ribosome biogenesis protein 1 is a yeast protein required for maturation of the 25S and 5.8S ribosomal RNAs. It is a component of 66S pre-ribosomal particles and is homologous to the human protein BOP1.

<span class="mw-page-title-main">PES1</span> Protein-coding gene in the species Homo sapiens

Pescadillo homolog is a protein that in humans is encoded by the PES1 gene.

<span class="mw-page-title-main">NOL5A</span> Protein-coding gene in the species Homo sapiens

Nucleolar protein 56 is a protein that in humans is encoded by the NOP56 gene.

<span class="mw-page-title-main">60S ribosomal protein L18a</span> Protein found in humans

60S ribosomal protein L18a is a protein that in humans is encoded by the RPL18A gene.

<span class="mw-page-title-main">40S ribosomal protein S2</span> Protein-coding gene in the species Homo sapiens

The RPS2 gene is the gene which, in humans, encodes the 40S ribosomal protein S2.

<span class="mw-page-title-main">DDX21</span> Protein-coding gene in the species Homo sapiens

Nucleolar RNA helicase 2 is an enzyme that in humans is encoded by the DDX21 gene.

<span class="mw-page-title-main">KRR1</span> Protein-coding gene in humans

KRR1 small subunit processome component homolog is a protein that in humans is encoded by the KRR1 gene.

<span class="mw-page-title-main">60S ribosomal protein L12</span> Protein found in humans

60S ribosomal protein L12 is a protein that in humans is encoded by the RPL12 gene.

<span class="mw-page-title-main">40S ribosomal protein S5</span> Protein-coding gene in the species Homo sapiens

40S ribosomal protein S5 is a ribosomal subunit of the Eukaryotic ribosome (80S) complex. In humans it is encoded by the RPS5 gene.

<span class="mw-page-title-main">40S ribosomal protein S10</span> Protein-coding gene in the species Homo sapiens

40S ribosomal protein S10 is a protein that in humans is encoded by the RPS10 gene.

<span class="mw-page-title-main">60S ribosomal protein L35a</span> Protein found in humans

60S ribosomal protein L35a is a protein that in humans is encoded by the RPL35A gene.

<span class="mw-page-title-main">40S ribosomal protein S20</span> Protein-coding gene in the species Homo sapiens

40S ribosomal protein S20 is a protein that in humans is encoded by the RPS20 gene.

<span class="mw-page-title-main">DDX39</span> Protein-coding gene in the species Homo sapiens

ATP-dependent RNA helicase DDX39 is an enzyme that in humans is encoded by the DDX39 gene.

<span class="mw-page-title-main">40S ribosomal protein S8</span> Protein-coding gene in the species Homo sapiens

40S ribosomal protein S8 is a protein that in humans is encoded by the RPS8 gene.

<span class="mw-page-title-main">Mitochondrial ribosomal protein L12</span> Protein-coding gene in the species Homo sapiens

39S ribosomal protein L12, mitochondrial is a protein that in humans is encoded by the MRPL12 gene.

<span class="mw-page-title-main">WDR12</span> Protein-coding gene in the species Homo sapiens

Ribosome biogenesis protein WDR12 is a protein that in humans is encoded by the WDR12 gene on chromosome 2. It is ubiquitously expressed in many tissues and cell types. WDR12 participates in ribosome biogenesis and cell proliferation as a component of the PeBoW complex. This protein is associated with cardiovascular diseases such as coronary artery disease and myocardial infarction. The PCSK9 gene also contains one of 27 loci associated with increased risk of coronary artery disease.

<span class="mw-page-title-main">Mitochondrial ribosomal protein L41</span> Protein-coding gene in the species Homo sapiens

39S ribosomal protein L41, mitochondrial is a protein that in humans is encoded by the MRPL41 gene.

<span class="mw-page-title-main">NOL6</span> Protein-coding gene in the species Homo sapiens

Nucleolar protein 6 is a protein that in humans is encoded by the NOL6 gene.

<span class="mw-page-title-main">Probable ribosome biogenesis protein RLP24</span> Protein-coding gene in the species Homo sapiens

Probable ribosome biogenesis protein RLP24 is a protein that in humans is encoded by the RSL24D1 gene.

<span class="mw-page-title-main">MRPS25</span> Protein-coding gene in the species Homo sapiens

28S ribosomal protein S25, mitochondrial is a protein that in humans is encoded by the MRPS25 gene.

References

  1. 1 2 3 ENSG00000285301 GRCh38: Ensembl release 89: ENSG00000261236, ENSG00000285301 - Ensembl, May 2017
  2. 1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000022557 - Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. Nagase T, Seki N, Tanaka A, Ishikawa K, Nomura N (Mar 1996). "Prediction of the coding sequences of unidentified human genes. IV. The coding sequences of 40 new genes (KIAA0121-KIAA0160) deduced by analysis of cDNA clones from human cell line KG-1". DNA Res. 2 (4): 167–74, 199–210. CiteSeerX   10.1.1.333.6945 . doi: 10.1093/dnares/2.4.167 . PMID   8590280.
  6. "Entrez Gene: BOP1 block of proliferation 1".
  7. 1 2 Kim J, Goo SY, Chung HJ, Yang HW, Yong TS, Lee KH, Park SJ (January 2006). "Interaction of beta-giardin with the Bop1 protein in Giardia lamblia". Parasitol. Res. 98 (2): 138–44. doi:10.1007/s00436-005-0040-8. PMID   16362343. S2CID   24519868.
  8. Killian A, Sarafan-Vasseur N, Sesboüé R, Le Pessot F, Blanchard F, Lamy A, Laurent M, Flaman JM, Frébourg T (September 2006). "Contribution of the BOP1 gene, located on 8q24, to colorectal tumorigenesis". Genes Chromosomes Cancer. 45 (9): 874–81. doi:10.1002/gcc.20351. PMID   16804918. S2CID   38299400.
  9. Rohrmoser M, Hölzel M, Grimm T, Malamoussi A, Harasim T, Orban M, Pfisterer I, Gruber-Eber A, Kremmer E, Eick D (May 2007). "Interdependence of Pes1, Bop1, and WDR12 controls nucleolar localization and assembly of the PeBoW complex required for maturation of the 60S ribosomal subunit". Mol. Cell. Biol. 27 (10): 3682–94. doi:10.1128/MCB.00172-07. PMC   1899993 . PMID   17353269.
  10. Hölzel M, Rohrmoser M, Schlee M, Grimm T, Harasim T, Malamoussi A, Gruber-Eber A, Kremmer E, Hiddemann W, Bornkamm GW, Eick D (August 2005). "Mammalian WDR12 is a novel member of the Pes1-Bop1 complex and is required for ribosome biogenesis and cell proliferation". J. Cell Biol. 170 (3): 367–78. doi:10.1083/jcb.200501141. PMC   2171466 . PMID   16043514.

Further reading

This article incorporates text from the public domain Pfam and InterPro: IPR012953