Peter Karl Sorger | |
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Born | 1961 (age 61–62) Halifax Nova Scotia, Canada |
Title | Otto Krayer Professor of Systems Pharmacology, Harvard Medical School |
Spouse | Caroline Shamu |
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Thesis | The transcriptional regulation of heat shock genes (1988) |
Doctoral advisor | Hugh Pelham |
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Peter Karl Sorger (born February 13,1961,in Halifax Nova Scotia,Canada) is a systems and cancer biologist and Otto Krayer Professor of Systems Pharmacology in the Department of Systems Biology at Harvard Medical School. [1] Sorger is the founding head of the Harvard Program in Therapeutic Science (HiTS),director of its Laboratory of Systems Pharmacology (LSP),and co-director of the Harvard MIT Center for Regulatory Science. He was previously a Professor of Biology and Biological Engineering at the Massachusetts Institute of Technology where he co-founded its program on Computational and Systems Biology (CSBi). Sorger is known for his work in the field of systems biology and for having helped launch the field of computational and systems pharmacology. His research focuses on the molecular origins of cancer and approaches to accelerate the development of new medicines. Sorger teaches Principles and Practice of Drug Development at Massachusetts Institute of Technology and Harvard University.
Sorger was born on February 13,1961,in Halifax Nova Scotia,Canada to Scottish and Austrian parents. His family immigrated to the US in 1963. He graduated summa cum laude from Harvard College in 1983 (in Biochemistry) where he studied the assembly of icosahedral viruses under the supervision of Stephen C. Harrison. He received his PhD for Biochemistry as a Marshall Scholar from Trinity College,Cambridge for research on the transcriptional regulation of heat shock genes [2] [3] under the supervision of Hugh Pelham at the Medical Research Council Laboratory of Molecular Biology in Cambridge,England. He then trained as a Richard Childs Fellow and Lucille P. Markey Scholar with Harold Varmus and Andrew Murray at the University of California,San Francisco.
Sorger joined the MIT Department of Biology in 1984 following a year as a visiting scientist with Anthony A. Hyman at the European Molecular Biology Laboratory,Heidelberg,Germany. Sorger became a full Professor in the MIT Biology and Biological Engineering Departments in 2004.
Sorger's postdoctoral and early faculty research led to the first reconstitution of a chromosome-microtubule attachment (a yeast kinetochore) and the subsequent identification of multiple kinetochore proteins. [4] [5] His group identified mammalian homologs of the checkpoint proteins that regulate entry into mitosis,and showed that mutations in these genes can be oncogenic because they cause chromosome instability. [6] [7] [8] This work contributed to the understanding of the faithful transmission of chromosomes from mother to daughter cells. Defects in these mechanisms cause aneuploidy that plays a major role in oncogenic transformation.
Working closely with Doug Lauffenburger and funded by the Defense Advanced Research Projects Agency and the National Institutes of Health's National Centers for Systems Biology program, [9] Sorger's work in the 1990s increasingly focused on oncogenesis itself and on mammalian signal transduction. [10] Sorger and Lauffenburger's approach combined molecular genetics,live-cell microscopy and mechanistic computational modeling. [11] [12] Their focus on biochemistry REF was unusual in an era dominated by genomics and ultimately led Sorger to co-found the software company Glencoe Software and the biotech company Merrimack Pharmaceuticals. [13] Subsequent work by Sorger' group led to a new understanding of stochastic fluctuation in cellular responses to natural ligands and drugs [14] [15] and to the development of a range of innovative computational methods,including the biochemistry-specific Python PySB [16] and the natural language processing and knowledge assembly system INDRA. [17] [18]
In 2011,Sorger was active in the development of the discipline of Quantitative Systems Pharmacology,including overseeing the preparation of a widely cited white paper for the NIH entitled "Quantitative and Systems Pharmacology in the Post-genomic Era:New Approaches to Discovering Drugs and Understanding Therapeutic Mechanisms". [19] This white paper envisioned the emergence of an empirically based but computationally sophisticated approach to the science underlying development of innovative new medicines. Sorger moved to Harvard Medical School [20] to pursue these approaches by establishing the Laboratory of Systems Pharmacology,which merges laboratory experiments,computer science,and medicine to fundamentally improve drug discovery. [21] Funding from the Massachusetts Life Sciences Center in 2014 [22] and 2017 [23] [24] made the lab a reality and it now has 150 faculty trainees and staff from Boston-area institutions including Harvard University,MIT,Tufts University,Northeastern University and Harvard-affiliated Hospitals.
Sorger's research involves multiple systems pharmacology approaches to cancer. The first focuses on preclinical pharmacology,the stage at which the molecular mechanisms of disease are studied and new drugs sought. An investigation into the causes of irreproducibility drug-response measurements [25] led to a series of conceptual, [26] computational, [27] and experimental improvements [28] in scoring drug action that are now widely used in academe and industry and have enabled the discovery of new mechanisms of action for existing drugs. [29] Recent work has focused on deep learning as means to further understand complex protein networks and drug mechanisms. [30] [31] The second project involves developing methods to study drug mechanism at scale in patients through highly multiplexed tissue imaging [32] [33] of the biopsies routinely acquired from patients (particularly cancer patients). [34] This has led to a very rapidly growing tissue imaging and digital histology program [35] that is part of the US National Cancer Institute Moonshot and promises to substantially advance precision cancer care. [36] The third project involves studying the clinical trial record to understand how successful and failed trials differ. An early success was the discovery that the great majority of approved combination cancer therapies exhibit independent action –not synergy. [37] [38] As Merck &Co. investigators subsequently realized,this fundamentally changes how immunotherapy combinations should be developed. [39] The group is now engaged in a large-scale effort [40] to digitize and make freely available all survival data from Phase 3 clinical trials. [41]
To address the need for face masks,respirators and other personal protective equipment for healthcare workers in the early COVID-19 pandemic,Sorger,physician Nicole LeBoeuf and MD-PhD student Deborah Plana established the Boston Area Pandemic Fabrication team (PanFab). [42] [43] This team of students and alumni from MIT and Harvard teamed up with local industry and led a series of 3D printing and rapid-turn manufacturing projects to make face shields, [44] mask frames, [45] powered air purifying respirators [46] and new ways to sterilize and reuse 95 respirators. [47] PanFab led to over a dozen open access publications and designs,including a thorough review of lessons learned [48] and a hope that we can be better prepared for future pandemics.
Susan Lee Lindquist,ForMemRS was an American professor of biology at MIT specializing in molecular biology,particularly the protein folding problem within a family of molecules known as heat-shock proteins,and prions. Lindquist was a member and former director of the Whitehead Institute and was awarded the National Medal of Science in 2010.
Bcl-2,encoded in humans by the BCL2 gene,is the founding member of the Bcl-2 family of regulator proteins that regulate cell death (apoptosis),by either inhibiting (anti-apoptotic) or inducing (pro-apoptotic) apoptosis. It was the first apoptosis regulator identified in any organism.
Autophagy is the natural,conserved degradation of the cell that removes unnecessary or dysfunctional components through a lysosome-dependent regulated mechanism. It allows the orderly degradation and recycling of cellular components. Although initially characterized as a primordial degradation pathway induced to protect against starvation,it has become increasingly clear that autophagy also plays a major role in the homeostasis of non-starved cells. Defects in autophagy have been linked to various human diseases,including neurodegeneration and cancer,and interest in modulating autophagy as a potential treatment for these diseases has grown rapidly.
Fulvestrant,sold under the brand name Faslodex among others,is a medication used to treat hormone receptor (HR)-positive metastatic breast cancer in postmenopausal women with disease progression as well as HR-positive,HER2-negative advanced breast cancer in combination with abemaciclib or palbociclib in women with disease progression after endocrine therapy. It is given by injection into a muscle.
Combination therapy or polytherapy is therapy that uses more than one medication or modality. Typically,the term refers to using multiple therapies to treat a single disease,and often all the therapies are pharmaceutical. 'Pharmaceutical' combination therapy may be achieved by prescribing/administering separate drugs,or,where available,dosage forms that contain more than one active ingredient.
Pamela Ann Silver is an American cell and systems biologist and a bioengineer. She holds the Elliot T. and Onie H. Adams Professorship of Biochemistry and Systems Biology at Harvard Medical School in the Department of Systems Biology. Silver is one of the founding Core Faculty Members of the Wyss Institute for Biologically Inspired Engineering at Harvard University.
In pharmacology,the term mechanism of action (MOA) refers to the specific biochemical interaction through which a drug substance produces its pharmacological effect. A mechanism of action usually includes mention of the specific molecular targets to which the drug binds,such as an enzyme or receptor. Receptor sites have specific affinities for drugs based on the chemical structure of the drug,as well as the specific action that occurs there.
Myc is a family of regulator genes and proto-oncogenes that code for transcription factors. The Myc family consists of three related human genes:c-myc (MYC),l-myc (MYCL),and n-myc (MYCN). c-myc was the first gene to be discovered in this family,due to homology with the viral gene v-myc.
Jason Swedlow is an American-born cell biologist and light microscopist who is Professor of Quantitative Cell Biology at the School of Life Sciences,University of Dundee,Scotland. He is a co-founder of the Open Microscopy Environment and Glencoe Software. In 2021,he joined Wellcome Leap as a Program Director.
Cell division protein kinase 6 (CDK6) is an enzyme encoded by the CDK6 gene. It is regulated by cyclins,more specifically by Cyclin D proteins and Cyclin-dependent kinase inhibitor proteins. The protein encoded by this gene is a member of the cyclin-dependent kinase,(CDK) family,which includes CDK4. CDK family members are highly similar to the gene products of Saccharomyces cerevisiae cdc28,and Schizosaccharomyces pombe cdc2,and are known to be important regulators of cell cycle progression in the point of regulation named R or restriction point.
Transient receptor potential cation channel subfamily M member 5 (TRPM5),also known as long transient receptor potential channel 5 is a protein that in humans is encoded by the TRPM5 gene.
CTP synthase 1 is an enzyme that is encoded by the CTPS1 gene in humans. CTP synthase 1 is an enzyme in the de novo pyrimidine synthesis pathway that catalyses the conversion of uridine triphosphate (UTP) to cytidine triphosphate (CTP). CTP is a key building block for the production of DNA,RNA and some phospholipids.
Ming-Ming Zhou is an American scientist who focuses on structural and chemical biology,NMR spectroscopy,and drug design. He is the Dr. Harold,Golden Lamport Professor,and Chairman of the Department of Pharmacological Sciences. He is also the Co-Director of the Drug Discovery Institute at the Icahn School of Medicine at Mount Sinai and Mount Sinai Health System in New York City,as well as Professor of Sciences.
Cancer systems biology encompasses the application of systems biology approaches to cancer research,in order to study the disease as a complex adaptive system with emerging properties at multiple biological scales. Cancer systems biology represents the application of systems biology approaches to the analysis of how the intracellular networks of normal cells are perturbed during carcinogenesis to develop effective predictive models that can assist scientists and clinicians in the validations of new therapies and drugs. Tumours are characterized by genomic and epigenetic instability that alters the functions of many different molecules and networks in a single cell as well as altering the interactions with the local environment. Cancer systems biology approaches,therefore,are based on the use of computational and mathematical methods to decipher the complexity in tumorigenesis as well as cancer heterogeneity.
Dana Pe'er,Chair and Professor in Computational and Systems Biology Program at Sloan Kettering Institute is a researcher in computational systems biology. A Howard Hughes Medical Institute (HHMI) Investigator since 2021,she was previously a professor at Columbia Department of Biological Sciences. Pe'er's research focuses on understanding the organization,function and evolution of molecular networks,particularly how genetic variations alter the regulatory network and how these genetic variations can cause cancer.
Tumour heterogeneity describes the observation that different tumour cells can show distinct morphological and phenotypic profiles,including cellular morphology,gene expression,metabolism,motility,proliferation,and metastatic potential. This phenomenon occurs both between tumours and within tumours. A minimal level of intra-tumour heterogeneity is a simple consequence of the imperfection of DNA replication:whenever a cell divides,a few mutations are acquired—leading to a diverse population of cancer cells. The heterogeneity of cancer cells introduces significant challenges in designing effective treatment strategies. However,research into understanding and characterizing heterogeneity can allow for a better understanding of the causes and progression of disease. In turn,this has the potential to guide the creation of more refined treatment strategies that incorporate knowledge of heterogeneity to yield higher efficacy.
A senolytic is among a class of small molecules under basic research to determine if they can selectively induce death of senescent cells and improve health in humans. A goal of this research is to discover or develop agents to delay,prevent,alleviate,or reverse age-related diseases. A related concept is "senostatic",which means to suppress senescence.
Mikaël Pittet is a Swiss research scientist.
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Sandro Santagata is an associate professor at Harvard Medical School and a physician-scientist at Brigham and Women’s Hospital where he practices neuropathology. His research focuses on precision medicine in cancer biology.
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