LaTeX is a software system for typesetting documents. LaTeX markup describes the content and layout of the document, as opposed to the formatted text found in WYSIWYG word processors like Microsoft Word, LibreOffice Writer and Apple Pages. The writer uses markup tagging conventions to define the general structure of a document, to stylise text throughout a document, and to add citations and cross-references. A TeX distribution such as TeX Live or MiKTeX is used to produce an output file suitable for printing or digital distribution.
StarOffice is a discontinued proprietary office suite. Its source code continues today in derived open-source office suites Collabora Online and LibreOffice. StarOffice supported the OpenOffice.org XML file format, as well as the OpenDocument standard, and could generate PDF and Flash formats. It included templates, a macro recorder, and a software development kit (SDK).
BibTeX is both a bibliographic flat-file database file format and a software program for processing these files to produce lists of references (citations). The BibTeX file format is a widely used standard with broad support by reference management software.
CiteULike was a web service which allowed users to save and share citations to academic papers. Based on the principle of social bookmarking, the site worked to promote and to develop the sharing of scientific references amongst researchers. In the same way that it is possible to catalog web pages or photographs, scientists could share citation information using CiteULike. Richard Cameron developed CiteULike in November 2004 and in 2006 Oversity Ltd. was established to develop and support CiteULike. In February 2019, CiteULike announced that it would be ceasing operations as of March 30, 2019.
The Common Lisp Interface Manager (CLIM) is a Common Lisp-based programming interface for creating user interfaces, i.e., graphical user interfaces (GUIs). It provides an application programming interface (API) to user interface facilities for the programming language Lisp. It is a fully object-oriented programming user interface management system, using the Common Lisp Object System (CLOS) and is based on the mechanism of stream input and output. There are also facilities for output device independence. It is descended from the GUI system Dynamic Windows of Symbolics' Lisp machines between 1988 and 1993.
... you can check out Common Lisp Interface Manager (CLIM). A descendant of the Symbolics Lisp machines GUI framework, CLIM is powerful but complex. Although many commercial Common Lisp implementations actually support it, it doesn't seem to have seen a lot of use. But in the past couple years, an open-source implementation of CLIM, McCLIM – now hosted at Common-Lisp.net – has been picking up steam lately, so we may be on the verge of a CLIM renaissance. – From Practical Common Lisp
JabRef is an open-source, cross-platform citation and reference management software. It is used to collect, organize and search bibliographic information.
EndNote is a commercial reference management software package, used to manage bibliographies and references when writing essays, reports and articles. EndNote was written by Richard Niles, and ownership changed hands several times since it was launched in 1989 by Niles & Associates: in 2000 it was acquired by Institute for Scientific Information’s ResearchSoft Division, part of Thomson Corporation, and in 2016 by Clarivate. EndNote's main competitors are Mendeley and Zotero. Unlike Mendeley and Zotero, EndNote is neither free-to-use nor offers a freemium model.
RIS is a standardized tag format developed by Research Information Systems, Incorporated to enable citation programs to exchange data. It is supported by a number of reference managers. Many digital libraries, like Web of Science, IEEE Xplore, Scopus, the ACM Portal, Scopemed, ScienceDirect, SpringerLink, Rayyan, The Lens, Accordance Bible Software, and online library catalogs can export citations in this format. Citation management applications can export and import citations in this format.
Zotero is free and open-source reference management software to manage bibliographic data and related research materials, such as PDF and ePUB files. Features include web browser integration, online syncing, generation of in-text citations, footnotes, and bibliographies, integrated PDF, ePUB and HTML readers with annotation capabilities, and a note editor, as well as integration with the word processors Microsoft Word, LibreOffice Writer, and Google Docs. It was originally created at the Center for History and New Media at George Mason University and, as of 2021, is developed by the non-profit Corporation for Digital Scholarship.
ContextObjects in Spans (COinS) is a method to embed bibliographic metadata in the HTML code of web pages. This allows bibliographic software to publish machine-readable bibliographic items and client reference management software to retrieve bibliographic metadata. The metadata can also be sent to an OpenURL resolver. This allows, for instance, searching for a copy of a book at a specific library.
OttoBib.com was a website with a free tool to generate an alphabetized bibliography of books from a list of International Standard Book Numbers (ISBN) with output in MLA, APA, Chicago/Turabian, BibTeX and Wikipedia {{cite book}} format. Each query also generated a "temporary" permalink which could be used to recall the bibliography without reentering the ISBN data. The site was a metasearch engine, integrating data from several sources, including the U.S. Library of Congress API, the Amazon.com database of books, and ISBNdb.com. OttoBib accepted ISBNs with either 10 or 13 digits.
The following tables compare notable reference management software. The comparison includes older applications that may no longer be supported, as well as actively-maintained software.
BibDesk is an open-source reference management software package for macOS, used to manage bibliographies and references when writing essays and articles. It can also be used to organize and maintain a library of documents in PDF format and other formats. It is primarily a BibTeX front-end for use with LaTeX, but also offers external bibliographic database connectivity for importing, a variety of means for exporting, and capability for linking to local documents and automatically filing local documents. It takes advantage of many macOS features such as AppleScript and Spotlight.
Referencer is a GNOME application to organize documents or references, and ultimately generate a BibTeX bibliography file. It is designed with the scientist/researcher in mind, and "document" may be taken to mean "paper" in general, although Referencer can deal with any kind of document that BibTeX can. Chief among Referencer's capabilities is the automatic acquisition of bibliographic information (metadata) for some kinds of documents. Upon adding a PDF file to a Referencer library file, it will automatically be searched for key identifiers such as a DOI code or arXiv identifier. If either of these is found, Referencer will attempt to retrieve the metadata for the document via the internet. However, metadata fetching for newer additions to arXiv is broken because of the change of format.
WIKINDX is a free bibliographic and quotations/notes management and article authoring system designed either for single use and multi-user collaborative use across the internet. WIKINDX falls within the category of reference management software, but also provides functionality to write notes and entire papers.
KBibTeX is a reference management software primarily for BibTeX which is typically used in conjunction with TeX/LaTeX. Beyond normal editing capabilities, it offers features such as searching and importing new references from Google Scholar or BibSonomy.
Pandoc is a free-software document converter, widely used as a writing tool and as a basis for publishing workflows. It was created by John MacFarlane, a philosophy professor at the University of California, Berkeley.
Gollum is wiki software that uses Git as the backend storage mechanism, and written mostly in Ruby. It started life as the wiki system used by the GitHub web hosting system. Although the open source Gollum project and the software currently used to run GitHub wikis have diverged from one another, Gollum strives to maintain compatibility with the latter. Currently it is used by GitLab server to store and interconnect wiki-pages with wiki-links, but the plan is to move complete away from Gollum in the future.
The KDE Gear is a set of applications and supporting libraries that are developed by the KDE community, primarily used on Linux-based operating systems but mostly multiplatform, and released on a common release schedule.
