The dinoflagellates are a monophyletic group of single-celled eukaryotes constituting the phylum Dinoflagellata and are usually considered protist. Dinoflagellates are mostly marine plankton, but they also are common in freshwater habitats. Their populations vary with sea surface temperature, salinity, and depth. Many dinoflagellates are photosynthetic, but a large fraction of these are in fact mixotrophic, combining photosynthesis with ingestion of prey.
Dinokaryota is a main grouping of dinoflagellates. They include all species where the nucleus remains a dinokaryon throughout the entire cell cycle, which is typically dominated by the haploid stage. All the "typical" dinoflagellates, such as Peridinium and Gymnodinium, belong here. Others are more unusual, including some that are colonial, amoeboid, or parasitic. Symbiodinium contains the symbiotic zooxanthellae.
Coral bleaching is the process when corals become white due to various stressors, such as changes in temperature, light, or nutrients. Bleaching occurs when coral polyps expel the zooxanthellae that live inside their tissue, causing the coral to turn white. The zooxanthellae are photosynthetic, and as the water temperature rises, they begin to produce reactive oxygen species. This is toxic to the coral, so the coral expels the zooxanthellae. Since the zooxanthellae produce the majority of coral colouration, the coral tissue becomes transparent, revealing the coral skeleton made of calcium carbonate. Most bleached corals appear bright white, but some are blue, yellow, or pink due to pigment proteins in the coral.
Zooxanthellae is a colloquial term for single-celled dinoflagellates that are able to live in symbiosis with diverse marine invertebrates including demosponges, corals, jellyfish, and nudibranchs. Most known zooxanthellae are in the genus Symbiodinium, but some are known from the genus Amphidinium, and other taxa, as yet unidentified, may have similar endosymbiont affinities. The true Zooxanthella K.brandt is a mutualist of the radiolarian Collozoum inerme and systematically placed in Peridiniales. Another group of unicellular eukaryotes that partake in similar endosymbiotic relationships in both marine and freshwater habitats are green algae zoochlorellae.
The aggregating anemone, or clonal anemone, is the most abundant species of sea anemone found on rocky, tide swept shores along the Pacific coast of North America. This cnidarian hosts endosymbiotic algae called zooxanthellae that contribute substantially to primary productivity in the intertidal zone. The aggregating anemone has become a model organism for the study of temperate cnidarian-algal symbioses.
Convolutidae is a family of acoels. It contains more than a third of all known acoel species.
Tridacna squamosa, known commonly as the fluted giant clam and scaly clam, is a species of bivalve in the family Cardiidae.
Symbiodinium is a genus of dinoflagellates that encompasses the largest and most prevalent group of endosymbiotic dinoflagellates known. These unicellular microalgae commonly reside in the endoderm of tropical cnidarians such as corals, sea anemones, and jellyfish, where the products of their photosynthetic processing are exchanged in the host for inorganic molecules. They are also harbored by various species of demosponges, flatworms, mollusks such as the giant clams, foraminifera (soritids), and some ciliates. Generally, these dinoflagellates enter the host cell through phagocytosis, persist as intracellular symbionts, reproduce, and disperse to the environment. The exception is in most mollusks, where these symbionts are intercellular. Cnidarians that are associated with Symbiodinium occur mostly in warm oligotrophic (nutrient-poor), marine environments where they are often the dominant constituents of benthic communities. These dinoflagellates are therefore among the most abundant eukaryotic microbes found in coral reef ecosystems.
Hippopus hippopus, also known as the Horse Hoof clam and Strawberry clam, is a species of giant clam in the Family Tridacna and the genus Hippopus. Hippopus is a delicacy in many Southeast Asian countries due to its high quality meat.
Cassiopea andromeda is one of many cnidarian species called the upside-down jellyfish. It usually lives in intertidal sand or mudflats, shallow lagoons, and around mangroves. This jellyfish, often mistaken for a sea anemone, usually keeps its mouth facing upward. Its yellow-brown bell, which has white or pale streaks and spots, pulsates to run water through its arms for respiration and to gather food.
Phyllodesmium is a genus of predatory sea slugs, aeolid nudibranchs, marine gastropod molluscs in the family Facelinidae.
Corculum cardissa, the heart cockle, is a species of marine bivalve mollusc in the family Cardiidae. It is found in the Indo-Pacific region. It has a symbiotic relationship with dinoflagellates (zooxanthellae), which live within its tissues.
The resilience of coral reefs is the biological ability of coral reefs to recover from natural and anthropogenic disturbances such as storms and bleaching episodes. Resilience refers to the ability of biological or social systems to overcome pressures and stresses by maintaining key functions through resisting or adapting to change. Reef resistance measures how well coral reefs tolerate changes in ocean chemistry, sea level, and sea surface temperature. Reef resistance and resilience are important factors in coral reef recovery from the effects of ocean acidification. Natural reef resilience can be used as a recovery model for coral reefs and an opportunity for management in marine protected areas (MPAs).
Catalaphyllia is a monotypic genus of stony coral in the family Euphylliidae from the western Pacific Ocean. It is represented by a single species, Catalaphyllia jardinei, commonly known as elegance coral. It was first described by William Saville-Kent in 1893 as Pectinia jardinei.
Antillogorgia bipinnata, the bipinnate sea plume, is a species of colonial soft coral, a sea fan in the family Gorgoniidae. It is found in the Caribbean Sea. It was first described as Pseudopterogorgia bipinnata in 1864 by the American zoologist Addison Emery Verrill. Williams and Chen (2012), transferred all the Atlantic species of Pseudopterogorgia to Antillogorgia.
Durusdinium trenchii is an endosymbiotic dinoflagellate, a unicellular alga which commonly resides in the tissues of tropical corals. It has a greater tolerance to fluctuations in water temperatures than do other species in the genus. It was named for the marine biologist R. K. Trench.
Anthopleura ballii, commonly known as the red speckled anemone, is a species of sea anemone in the family Actiniidae. It is found in shallow water in the northeastern Atlantic Ocean.
Clavularia viridis is a species of colonial soft coral in the family Clavulariidae. It is found in shallow waters in the tropical Indo-Pacific.
Turbinaria reniformis, commonly known as yellow scroll coral, is a species of colonial stony coral in the family Dendrophylliidae. It is native to the Indo-Pacific region. The International Union for Conservation of Nature has rated its conservation status as being "vulnerable".
Waminoa is a genus of acoels which are epizoic on living corals, using the coral's mucus as a source of food. Unusually, these acoels harbor two genera of endosymbiotic dinoflagellates: Symbiodinium and Amphidinium; it is not typical for two different genera of dinoflagellates to coexist in a single host. Waminoa's host coral may also contain dinoflagellates of the genus Symbiodinium but not Amphidinium.
