Alliinase

Last updated
alliin lyase
Identifiers
EC no. 4.4.1.4
CAS no. 9031-77-0
Databases
IntEnz IntEnz view
BRENDA BRENDA entry
ExPASy NiceZyme view
KEGG KEGG entry
MetaCyc metabolic pathway
PRIAM profile
PDB structures RCSB PDB PDBe PDBsum
Gene Ontology AmiGO / QuickGO
Search
PMC articles
PubMed articles
NCBI proteins
Alliinase_C
PDB 2hor EBI.jpg
crystal structure of alliinase from garlic- apo form
Identifiers
SymbolAlliinase_C
Pfam PF04864
Pfam clan CL0061
InterPro IPR006948
SCOP2 1lk9 / SCOPe / SUPFAM
Available protein structures:
Pfam   structures / ECOD  
PDB RCSB PDB; PDBe; PDBj
PDBsum structure summary
Alliinase EGF-like domain
PDB 2hor EBI.jpg
crystal structure of alliinase from garlic- apo form
Identifiers
SymbolEGF_alliinase
Pfam PF04863
Pfam clan CL0001
InterPro IPR006947
SCOP2 1lk9 / SCOPe / SUPFAM
Available protein structures:
Pfam   structures / ECOD  
PDB RCSB PDB; PDBe; PDBj
PDBsum structure summary

In enzymology, an alliin lyase (EC 4.4.1.4) is an enzyme that catalyzes the chemical reaction

Contents

an S-alkyl-L-cysteine S-oxide an alkyl sulfenate + 2-aminoacrylate

Hence, this enzyme has one substrate, S-alkyl-L-cysteine S-oxide, and two products, alkyl sulfenate and 2-aminoacrylate.

This enzyme belongs to the family of lyases, specifically the class of carbon-sulfur lyases. The systematic name of this enzyme class is S-alkyl-L-cysteine S-oxide alkyl-sulfenate-lyase (2-aminoacrylate-forming). Other names in common use include alliinase, cysteine sulfoxide lyase, alkylcysteine sulfoxide lyase, S-alkylcysteine sulfoxide lyase, L-cysteine sulfoxide lyase, S-alkyl-L-cysteine sulfoxide lyase, and alliin alkyl-sulfenate-lyase. It employs one cofactor, pyridoxal phosphate.

Many alliinases contain a novel N-terminal epidermal growth factor-like domain (EGF-like domain). [1]

Occurrence

These enzymes are found in plants of the genus Allium , such as garlic and onions. Alliinase is responsible for catalyzing chemical reactions that produce the volatile chemicals that give these foods their flavors, odors, and tear-inducing properties. Alliinases are part of the plant's defense against herbivores. Alliinase is normally sequestered within a plant cell, but, when the plant is damaged by a feeding animal, the alliinase is released to catalyze the production of the pungent chemicals. This tends to have a deterrent effect on the animal. The same reaction occurs when onion or garlic is cut with a knife in the kitchen.

Chemistry

In garlic, an alliinase enzyme acts on the chemical alliin converting it into allicin. The process involves two stages: elimination of 2-propenesulfenic acid from the amino acid unit (with α-aminoacrylic acid as a byproduct), and then condensation of two of the sulfenic acid molecules.

Reaction scheme for the conversion: cysteine - alliin - allicin Cysteine-to-allicin-2D-skeletal.svg
Reaction scheme for the conversion: cysteine → alliin → allicin

Alliin and related substrates found in nature are chiral at the sulfoxide position (usually having the S absolute configuration, and alliin itself was the first natural product found to have both carbon- and sulfur-centered stereochemistry. [2] However, the sulfenic acid intermediate is not chiral, and the final product's stereochemistry is not controlled.

There are a range of similar enzymes that can react with the cysteine-derived sulfoxides present in different species. In onions, an isomer of alliin, isoalliin, is converted to 1-propenesulfenic acid. A separate enzyme, the lachrymatory factor synthase or LFS, then converts this chemical to syn-propanethial-S-oxide, a potent lachrymator. The analogous butyl compound, syn-butanethial-S-oxide, is found in Allium siculum species. [3]

Structural studies

As of late 2007, 3 structures have been solved for this class of enzymes, using X-ray crystallography. The PDB accession codes are 1LK9, 2HOR, and 2HOX.

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<span class="mw-page-title-main">Allicin</span> Chemical compound

Allicin is an organosulfur compound obtained from garlic. When fresh garlic is chopped or crushed, the enzyme alliinase converts alliin into allicin, which is responsible for the aroma of fresh garlic. Allicin is unstable and quickly changes into a series of other sulfur-containing compounds such as diallyl disulfide. Allicin is an antifeedant, i.e. the defense mechanism against attacks by pests on the garlic plant.

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In enzymology, a S-alkylcysteine lyase is an enzyme that catalyzes the chemical reaction

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S-alkyl-L-cysteine sulfoxide lyase may refer to:

References

  1. Kuettner EB, Hilgenfeld R, Weiss MS (November 2002). "The active principle of garlic at atomic resolution". J. Biol. Chem. 277 (48): 46402–7. doi: 10.1074/jbc.M208669200 . PMID   12235163.
  2. Block, Eric (2009). Garlic and Other Alliums: The Lore and the Science. Cambridge, Eng: Royal Society of Chemistry. pp. 100–106. ISBN   978-0-85404-190-9.
  3. Kubec R, Cody RB, Dane AJ, Musah RA, Schraml J, Vattekkatte A, Block E (2010). "Applications of Direct Analysis in Real Time−Mass Spectrometry (DART-MS) in Allium Chemistry. (Z)-Butanethial S-Oxide and 1-Butenyl Thiosulfinates and their S-(E)-1-Butenylcysteine S-Oxide Precursor from Allium siculum". Journal of Agricultural and Food Chemistry. 58 (2): 1121–1128. doi:10.1021/jf903733e. PMID   20047275.

Bibliography