Amycolatopsis

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Amycolatopsis
Amycolatopsis jejuensis NRRL B-24427 (Type Strain).jpg
Amycolatopsis jejuensis on agar plate
Scientific classification OOjs UI icon edit-ltr.svg
Domain: Bacteria
Phylum: Actinomycetota
Class: Actinomycetia
Order: Pseudonocardiales
Family: Pseudonocardiaceae
Genus: Amycolatopsis
Lechevalier et al. 1986 [1]
Species

See text.

Synonyms
  • YuhushiellaMao et al. 2011

Amycolatopsis is a genus of high GC-content bacteria within the family Pseudonocardiaceae. [1] The genus is known for producing many types of antibiotics, including

Contents

Degradation of bio-polymers

Several bacteria from the genus Amycolatopsis are able to enzymatically hydrolyze the ester bonds of poly-lactic acid (PLA) films in aquatic medium. So far, it is one of the few known bacteria able to biodegrade the bioplastic outside compost facilities in a relatively short period of time. [3] [4]

Species

Amycolatopsis bartoniae Amycolatopsis bartoniae NRRL B-24846 (Type Strain).jpg
Amycolatopsis bartoniae

Amycolatopsis comprises the following species: [5]

Related Research Articles

<i>Micromonospora</i> Genus of bacteria

Micromonospora is a genus of bacteria of the family Micromonosporaceae. The genus name was first proposed in 1923 by Danish physician Jeppe Ørskov in an attempt to classify what at the time was considered "ray fungi" based on morphology. Members of this genus are found throughout natural soil and sediment environments, as well as in association with roots of plants of various species. The genus is well known for its ability to produce a variety of medically relevant products.

<span class="mw-page-title-main">Micromonosporaceae</span> Family of bacteria

Micromonosporaceae is a family of bacteria of the class Actinomycetia. They are gram-positive, spore-forming soil organisms that form a true mycelium.

<span class="mw-page-title-main">Hyphomicrobiales</span> Order of bacteria

The Hyphomicrobiales are an order of Gram-negative Alphaproteobacteria.

<i>Nocardia</i> Genus of bacteria

Nocardia is a genus of weakly staining Gram-positive, catalase-positive, rod-shaped bacteria. It forms partially acid-fast beaded branching filaments. It contains a total of 85 species. Some species are nonpathogenic, while others are responsible for nocardiosis. Nocardia species are found worldwide in soil rich in organic matter. In addition, they are oral microflora found in healthy gingiva, as well as periodontal pockets. Most Nocardia infections are acquired by inhalation of the bacteria or through traumatic introduction.

<span class="mw-page-title-main">Pseudonocardiaceae</span> Family of bacteria

The Pseudonocardiaceae are a family of bacteria in the order Actinomycetales and the only member of the suborder Pseudonocardineae.

<i>Streptomyces griseus</i> Species of bacterium

Streptomyces griseus is a species of bacteria in the genus Streptomyces commonly found in soil. A few strains have been also reported from deep-sea sediments. It is a Gram-positive bacterium with high GC content. Along with most other streptomycetes, S. griseus strains are well known producers of antibiotics and other such commercially significant secondary metabolites. These strains are known to be producers of 32 different structural types of bioactive compounds. Streptomycin, the first antibiotic ever reported from a bacterium, comes from strains of S. griseus. Recently, the whole genome sequence of one of its strains had been completed.

<i>Pseudonocardia</i> Genus of bacteria

Pseudonocardia is the type genus of the bacteria family Pseudonocardiaceae. Members of this genus have been found living mutualistically on the cuticle of the leafcutter ants because the bacteria has antibiotic properties that protect the fungus grown by the ants. When they are grooming, their legs are passed over their mouth gland that produces the antibiotic and then their legs touch the fungi while they are walking around. The ants have metapleural glands that produce the antimicrobial components to eliminate the Escovopsis fungi. The bacteria may also be found in crypts on the propleural plate. Pseudonocardia is found to have antibiotic properties provided to the leaf-cutter ant to inhibit the growth of Escovopsis, which is a black yeast that parasitizes the leaf-cutter ant. Pseudonocardia can be found in both aquatic and terrestrial ecosystems. Pseudonocardia belongs to the phylum Actinobacteria. Most Actinobacteria grow in soils that are of a neutral pH. Actinobacteria are also important in plant-associated microbial communities are referred to as "free-living." This means that they are not dependent on another organism to live. For example: A non-free-living organism would be a parasite that depends on a host as a food source and a place for shelter. "Free-living" also allows these organisms to require less energy and food for survival. Pseudonocardia is catalase-positive, non-motile, aerobic and a non-acid-fasting bacteria and produces a gram positive reaction. Under the microscope they exhibit branching, rod-shaped organisms.
There are many different strains of Pseudonocardia and a good portion of these strains have been found in China, in soils of the forest, and in Eucalyptus trees of Australia.

<i>Actinomadura</i> Genus of bacteria

The genus Actinomadura is one of four genera of Actinomycetota that belong to the family Thermomonosporaceae. It contains aerobic, Gram-positive, non-acid-fast, non-motile, chemo-organotrophic actinomycetes that produce well-developed, non-fragmenting vegetative mycelia and aerial hyphae that differentiate into surface-ornamented spore chains. These chains are of various lengths and can be straight, hooked or spiral. The genus currently comprises over 70 species with validly published names with standing in nomenclature, although the species status of some strains remains uncertain, and further comparative studies are needed.

Actinoalloteichus is a genus in the phylum Actinomycetota (Bacteria).

Actinokineospora is a genus in the phylum Actinomycetota (Bacteria).

<i>Actinoplanes</i> Genus of bacteria

Actinoplanes is a genus in the family Micromonosporaceae. They have aerial mycelia and spherical, motile spores. Actinoplanes species produce the pharmaceutically important compounds valienamine, teicoplanin, and ramoplanin.

<i>Amycolatopsis orientalis</i> Species of bacterium

Amycolatopsis orientalis is a Gram-positive bacterium in the phylum Actinomycetota. It produces several substances with antimicrobial properties, including the antibiotic drug vancomycin.

Gordonia is a genus of gram-positive, aerobic, catalase-positive bacterium in the Actinomycetota, closely related to the Rhodococcus, Mycobacterium, Skermania, and Nocardia genera. Gordonia bacteria are aerobic, motile, and non-sporulating. Gordonia is from the same lineage that includes Mycobacterium tuberculosis. The genus was discovered by Tsukamura in 1971 and named after American bacteriologist Ruth Gordon.. Many species are often found in the soil, while other species have been isolated from aquatic environments. Gordonia species are rarely known to cause infections in humans.

Amycolatopsis rifamycinica is a species of Gram-positive bacteria in the genus Amycolatopsis. It produces the rifamycin antibiotics, which are used to treat mycobacterial diseases such as tuberculosis and leprosy. The type strain of Amycolatopsis rifamycinica has been reclassified several times. When it was first isolated from a French soil sample in 1957, it was identified as Streptomyces mediterranei. In 1969, the species was renamed Nocardia mediterranei because its cell wall was thought to resemble that of Nocardia species. The species was renamed Amycolatopsis mediterranei in 1986 after finding that it is not susceptible to Nocardia phage and has a cell wall that lacks mycolic acid. Finally, in 2004, it was determined that strain DSM 46095 represented a new species, independent of Amycolatopsis mediterranei, based on 16S ribosomal RNA sequencing. The new species was named Amycolatopsis rifamycinica.

<i>Streptomyces antibioticus</i> Species of bacterium

Streptomyces antibioticus is a gram-positive bacterium discovered in 1941 by Nobel-prize-winner Selman Waksman and H. Boyd Woodruff. Its name is derived from the Greek "strepto-" meaning "twisted", alluding to this genus' chain-like spore production, and "antibioticus", referring to this species' extensive antibiotic production. Upon its first characterization, it was noted that S. antibioticus produces a distinct soil odor.

Kibdelosporangium phytohabitans is a bacterium from the genus Kibdelosporangium which has been isolated from seeds from the plant Jatropha curcas in Sichuan, China.

Prauserella rugosa is a bacterium from the genus Prauserella which has been isolated from the rumen of cattle.

Pseudonocardia rhizophila is a bacterium from the genus of Pseudonocardia which has been isolated from rhizosphere soil from the plant Tripterygium wilfordii in Yunnan in China.

Sinorhodobacter is a genus of bacteria from the family of Rhodobacteraceae.

References

  1. 1 2 Lechevalier MP, Prauser H, Labeda DP, Ruan JS. (1986). "Two new genera of nocardioform actinomycetes: Amycolata gen. nov. and Amycolatopsis gen. nov". Int. J. Syst. Bacteriol. 36: 29–37. doi: 10.1099/00207713-36-1-29 .
  2. NAOKI, MATSUMOTO (November 1997). "Epoxyquinomicins A, B, C and D, new antibiotics from Amycolatopsis. I. Taxonomy, fermentation, isolation and antimicrobial activities". J Antibiot (Tokyo). 50 (11): 900–905. doi: 10.7164/antibiotics.50.900 . PMID   9592560.
  3. Poly(lactic acid) : synthesis, structures, properties, processing, and applications. Auras, Rafael. Hoboken, N.J.: Wiley. 2010. ISBN   978-0-470-64983-1. OCLC   709664760.{{cite book}}: CS1 maint: others (link)
  4. Y. Ikura, T. Kudo (1999). "Isolation of a microorganism capable of degrading poly-(L-lactide)". J. Gen. Appl. Microbiol. 45 (5): 247–251. doi: 10.2323/jgam.45.247 . PMID   12501367.
  5. Euzéby JP, Parte AC. "Amycolatopsis". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved August 29, 2022.
  6. Xing, Ke; Liu, Wei; Zhang, Yue-Ji; Bian, Guang-Kai; Zhang, Wen-Di; Tamura, Tomohiko; Lee, Jung-Sook; Qin, Sheng; Jiang, Ji-Hong (2013). "Amycolatopsis jiangsuensis sp. nov., a novel endophytic actinomycete isolated from a coastal plant in Jiangsu, China". Antonie van Leeuwenhoek. 103 (2): 433–439. doi:10.1007/s10482-012-9823-y. PMID   23053697. S2CID   254226376.
  7. Everest, Gareth J.; Roes-Hill, Marilize le; Omorogie, Clifford; Cheung, Shuk-Kwan; Cook, Andrew E.; Goodwin, Candice M.; Meyers, Paul R. (2013). "Amycolatopsis umgeniensis sp. nov., isolated from soil from the banks of the Umgeni River in South Africa". Antonie van Leeuwenhoek. 103 (3): 673–681. doi:10.1007/s10482-012-9851-7. PMID   23180373. S2CID   254237727.