Coccomyxa

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Coccomyxa
Coccomyxa polymorpha.png
Coccomyxa polymorpha
Scientific classification OOjs UI icon edit-ltr.svg
(unranked): Viridiplantae
Division: Chlorophyta
Class: Trebouxiophyceae
Order: incertae sedis
Family: Coccomyxaceae
Genus: Coccomyxa
Schmidle, 1901
Type species
Coccomyxa dispar
Species [1]

See text

Coccomyxa is a genus of green algae in the family Coccomyxaceae. [1] This genus is defined by their small, elliptical to spherical shape, and the presence of a simple parietal chloroplast. These features, along with their occurrence in various lifestyles such as free-living, parasitic, or as photobionts , have been used to identify more than 40 species. [2] Using additional morphological features, such as brown akinetes formation, allows for the differentiation between Coccomyxa and the genus Pseudococcomyxa, as they tend to share some morphological characteristics like the general cell shape and one-sided mucilage cap. [3] Recent molecular analysis, however, indicates that the genus Pseudococcomyxa is contained within different Coccomyxa clades, signaling the fact that the two genera are the same. [4] Coccomyxa has often been used as a model organism, and its genome is being completely sequenced. The genus is also an attractive candidate for biofuels. [5]

Contents

Etymology

Coccomyxa is a combination of two greco-Latin roots, cocco- and -myxa. Cocco- is a Latinized form of the Greek word kokkos, meaning “berry”, or “seed”. [6] This is in regards to shape, referencing that the Coccomyxa takes on an elliptical and globular structure. -myxa is a Greek term meaning “mucus”, [7] in reference to Coccomyxa’s production of mucoid substances.

Morphology

Coccomyxa species are relatively small in size, measuring at about 6-14 by 3-6 μm and green in colour due to the presence of chlorophyll a and b. [8] These green algae are elliptical to globular. Their cell wall varies in thickness, from about 40-100 nm, and the cup-shaped chloroplast makes up about half of the volume of the cell. Starch grains are located around the thylakoids. [9] The genus Coccomyxa has a simple parietal chloroplast, but lacks a pyrenoid and flagellated stages. [4]

Coccomyxa are haplontic, meaning they spend a majority of their life cycles as haploids, and generally reproduce asexually. [3]

Habitat and ecology

Coccomyxa has a worldwide distribution, and are able to form biofilms, inhabiting both marine and freshwater environments. They can be dominant in certain ecosystems and display an impressive diversity in habitat, possessing lifestyles that range from free-living to parasitic. Coccomyxa has been recorded free-living in terrestrial biofilms, as soil algae, connected with mosses, planktonic in limnic ecosystems, in symbiotic associations with fungi and higher plants, and parasitic to marine mussels. [4] There is, however, no current studies that show Coccomyxa free-living in marine environments.

Green algae have been shown to play a significant role in ecosystems. A species of Coccomyxa, Coccomyxa parasitica, has been noted as parasitizing the wild mussels from the Vigo estuary in Galicia, Spain. The aggregations of the green algae occur in the mantle, gill filaments, adductor muscle, visceral mass, and haemolymph of the species M. galloprovincialis. [4] Species of Coccomyxa are photobiont partners in many lichens. [10]

Practical importance

Coccomyxa is often used as a model organism, as its entire genome sequence has been published. [4] This allows for further research as Coccomyxa can serve as a frame of reference or for further experimentation. Additionally, a free living Coccomyxa species, Coccomyxa sp.C-169,[ check spelling ] was suggested to be used for biofuels, as their enzyme-digestable cell wall and lipid production gained traction for research use above other strains.

Species list

Related Research Articles

<span class="mw-page-title-main">Endosymbiont</span> Organism that lives within the body or cells of another organism

An endosymbiont or endobiont is any organism that lives within the body or cells of another organism most often, though not always, in a mutualistic relationship. This phenomenon is known as endosymbiosis. Examples are nitrogen-fixing bacteria, which live in the root nodules of legumes, single-cell algae inside reef-building corals and bacterial endosymbionts that provide essential nutrients to insects.

<span class="mw-page-title-main">Plastid</span> Plant cell organelles that perform photosynthesis and store starch

A plastid, pl.plastids, is a membrane-bound organelle found in the cells of plants, algae, and some other eukaryotic organisms;. They are considered to be intracellular endosymbiotic cyanobacteria.

<span class="mw-page-title-main">Lichen</span> Symbiosis of fungi with algae or cyanobacteria

A lichen is a composite organism that arises from algae or cyanobacteria living among filaments of multiple fungi species in a mutualistic relationship. Lichens are important actors in nutrient cycling and act as producers which many higher trophic feeders feed on, such as reindeer, gastropods, nematodes, mites, and springtails. Lichens have properties different from those of their component organisms. They come in many colors, sizes, and forms and are sometimes plant-like, but are not plants. They may have tiny, leafless branches (fruticose); flat leaf-like structures (foliose); grow crust-like, adhering tightly to a surface (substrate) like a thick coat of paint (crustose); have a powder-like appearance (leprose); or other growth forms.

<span class="mw-page-title-main">Green algae</span> Paraphyletic group of autotrophic eukaryotes in the clade Archaeplastida

The green algae are a group consisting of the Prasinodermophyta and its unnamed sister which contains the Chlorophyta and Charophyta/Streptophyta. The land plants (Embryophytes) have emerged deep in the Charophyte alga as a sister of the Zygnematophyceae. Since the realization that the Embryophytes emerged within the green algae, some authors are starting to include them. The completed clade that includes both green algae and embryophytes is monophyletic and is referred to as the clade Viridiplantae and as the kingdom Plantae. The green algae include unicellular and colonial flagellates, most with two flagella per cell, as well as various colonial, coccoid and filamentous forms, and macroscopic, multicellular seaweeds. There are about 22,000 species of green algae. Many species live most of their lives as single cells, while other species form coenobia (colonies), long filaments, or highly differentiated macroscopic seaweeds.

<span class="mw-page-title-main">Cyanolichen</span>

Cyanolichens are lichens that apart from the basic fungal component ("mycobiont"), contain cyanobacteria, otherwise known as blue-green algae, as the photosynthesizing component ("photobiont"). Overall, about a third of lichen photobionts are cyanobacteria and the other two thirds are green algae.

<i>Xanthoria parietina</i> Species of lichen

Xanthoria parietina is a foliose lichen in the family Teloschistaceae. It has wide distribution, and many common names such as common orange lichen, yellow scale, maritime sunburst lichen and shore lichen. It can be found near the shore on rocks or walls, and also on inland rocks, walls, or tree bark. It was chosen as a model organism for genomic sequencing by the US Department of Energy Joint Genome Institute (JGI).

Dictyochloropsis is a genus of unicellular green alga of the phylum Chlorophyta. This genus consists of free-living algae which have a reticulate (net-like) chloroplast that varies slightly in morphology between species, and that when mature always lacks a pyrenoid. Dictyochloropsis is asexual and reproduces using autospores.

<i>Elliptochloris</i> Genus of algae

Elliptochloris is a genus of green algae in the order Prasiolales. Some species in the genus are photobiont partners in lichens.

<i>Heterococcus</i> Genus of algae

Heterococcus is a genus of yellow-green algae (xanthophytes) in the family Heteropediaceae. It is the only xanthophyte genus known to form lichens.

<i>Trebouxia</i> Genus of algae

Trebouxia is a unicellular green alga. It is a photosynthetic organism that can exist in almost all habitats found in polar, tropical, and temperate regions. It can either exist in a symbiotic relationship with fungi in the form of lichen or it can survive independently as a free-living organism alone or in colonies. Trebouxia is the most common photobiont in extant lichens. It is a primary producer of marine, freshwater and terrestrial ecosystems. It uses carotenoids and chlorophyll a and b to harvest energy from the sun and provide nutrients to various animals and insects.

<span class="mw-page-title-main">Arthoniales</span> Order of fungi

The Arthoniales is the second largest order of mainly crustose lichens, but fruticose lichens are present as well. The order contains around 1500 species, while the largest order with lichenized fungi, the Lecanorales, contains more than 14000 species.

<span class="mw-page-title-main">Teloschistales</span> Order of lichen-forming fungi

The Teloschistales are an order of mostly lichen-forming fungi belonging to the class Lecanoromycetes in the division Ascomycota. According to one 2008 estimate, the order contains 5 families, 66 genera, and 1954 species. The predominant photobiont partners for the Teloschistales are green algae from the genera Trebouxia and Asterochloris.

<span class="mw-page-title-main">Verrucariaceae</span> Family of mostly lichenised fungi

Verrucariaceae is a family of lichens and a few non-lichenised fungi in the order Verrucariales. The lichens have a wide variety of thallus forms, from crustose (crust-like) to foliose (bushy) and squamulose (scaly). Most of them grow on land, some in freshwater and a few in the sea. Many are free-living but there are some species that are parasites on other lichens, while one marine species always lives together with a leafy green alga.

<span class="mw-page-title-main">Red algae</span> Division of plant life

Red algae, or Rhodophyta, are one of the oldest groups of eukaryotic algae. The Rhodophyta comprises one of the largest phyla of algae, containing over 7,000 currently recognized species with taxonomic revisions ongoing. The majority of species (6,793) are found in the Florideophyceae (class), and mostly consist of multicellular, marine algae, including many notable seaweeds. Red algae are abundant in marine habitats but relatively rare in freshwaters. Approximately 5% of red algae species occur in freshwater environments, with greater concentrations found in warmer areas. Except for two coastal cave dwelling species in the asexual class Cyanidiophyceae, there are no terrestrial species, which may be due to an evolutionary bottleneck in which the last common ancestor lost about 25% of its core genes and much of its evolutionary plasticity.

<span class="mw-page-title-main">Cephalodium</span> Morphological structure found in some lichens

A cephalodium (pl. cephalodia) is a small gall-like structure found in some lichens. They occur only lichens which contain both cyanobacterial and green algal partners. Cephalodia can occur within the tissues of the lichen, or on its upper or lower surface. Lichens with cephalodia can fix nitrogen, and may be an important contributor of nitrogen to the ecosystem.

Lichen anatomy and physiology is very different from the anatomy and physiology of the fungus and/or algae and/or cyanobacteria that make up the lichen when growing apart from the lichen, either naturally, or in culture. The fungal partner is called the mycobiont. The photosynthetic partner, algae or cyanobacteria, is called the photobiont. The body of a lichens that does not contain reproductive parts of the fungus is called the thallus. The thallus is different from those of either the fungus or alga growing separately. The fungus surrounds the algal cells, often enclosing them within complex fungal tissues unique to lichen associations. In many species the fungus penetrates the algal cell wall, forming penetration pegs or haustoria similar to those produced by pathogenic fungi. Lichens are capable of surviving extremely low levels of water content (poikilohydric). However, the re-configuration of membranes following a period of dehydration requires several minutes at least.

<span class="mw-page-title-main">Symbiosis in lichens</span>

Symbiosis in lichens is the mutually beneficial symbiotic relationship of green algae and/or blue-green algae (cyanobacteria) living among filaments of a fungus, forming lichen.

Hydropunctaria rheitrophila is a species of freshwater, saxicolous (rock-dwelling), crustose lichen in the family Verrucariaceae. It was formally described as a new species in 1922 by German lichenologist Georg Hermann Zschacke as a species of Verrucaria. Christine Keller, Cécile Gueidan, and Holger Thüs transferred it to the newly circumscribed genus Hydropunctaria in 2009. It is one of several aquatic lichens that are in this genus. The photobiont partner of Hydropunctaria rheitrophila is a yellow-green alga.

<i>Solorina crocea</i> Species of lichen

Solorina crocea, commonly known as the orange chocolate chip lichen, is a species of terricolous (ground-dwelling) and foliose (leafy) lichen in the family Peltigeraceae. The lichen, which was first formally described by Carl Linnaeus in 1753, has an arctic–alpine and circumpolar distribution and occurs in Asia, Europe, North America, and New Zealand. It generally grows on the bare ground in sandy soils, often in moist soil near snow patches or seepage areas. Although several forms and varieties of the lichen have been proposed in its history, these are not considered to have any independent taxonomic significance.

Trebouxia gelatinosa is a common symbiotic species of green alga in the family Trebouxiaceae. Formally described as new to science in 1975, it is usually found in association with different species of lichen-forming fungi.

References

  1. 1 2 "Coccomyxa". Taxonomy browser. National Center for Biotechnology Information . Retrieved August 30, 2011.
  2. Schmidle, W. (1901). "Ueber drei Algengenera". Berichte der Deutschen Botanischen Gesellschaft. 19 (1): 10–24. doi:10.1111/j.1438-8677.1901.tb04939.x. S2CID   250472699.
  3. 1 2 Grube, Martin; Seckbach, Joseph; Muggia, Lucia (2017). Algal and cyanobacteria symbioses. Grube, Martin; Seckbach, J. (Joseph); Muggia, Lucia. New Jersey. ISBN   978-1786340573. OCLC   935984643.{{cite book}}: CS1 maint: location missing publisher (link)
  4. 1 2 3 4 5 Darienko, Tatyana; Gustavs, Lydia; Eggert, Anja; Wolf, Wiebke; Pröschold, Thomas (2015-06-16). "Evaluating the Species Boundaries of Green Microalgae (Coccomyxa, Trebouxiophyceae, Chlorophyta) Using Integrative Taxonomy and DNA Barcoding with Further Implications for the Species Identification in Environmental Samples". PLOS ONE. 10 (6): e0127838. Bibcode:2015PLoSO..1027838D. doi: 10.1371/journal.pone.0127838 . ISSN   1932-6203. PMC   4469705 . PMID   26080086.
  5. "Home - Coccomyxa sp. C-169". genome.jgi.doe.gov. Retrieved 2018-04-22.
  6. "the definition of cocco-". Dictionary.com. Retrieved 2018-04-22.
  7. "Definition of -MYXA". www.merriam-webster.com. Retrieved 2018-04-22.
  8. Whittle, S.J.; Casselton, P.J. (1969). "The chloroplast pigments of some green and yellow-green algae". British Phycological Journal. 4: 55–64. doi: 10.1080/00071616900650041 .
  9. Peveling, Elisabeth; Galun, Margalith (1976-11-01). "Electron-microscopical studies on the phycobiont Coccomyxa Schmidle". New Phytologist. 77 (3): 713–718. doi: 10.1111/j.1469-8137.1976.tb04665.x . ISSN   1469-8137.
  10. Sanders, William B.; Masumoto, Hiroshi (2021). "Lichen algae: the photosynthetic partners in lichen symbioses". The Lichenologist. 53 (5): 347–393. doi: 10.1017/S0024282921000335 .