This glossary provides an overview of terms used in the description of lichens, composite organisms arising from algae or cyanobacteria living symbiotically among filaments of multiple fungus species. [1] [2]
Erik Acharius, known as the "father of lichenology," coined many lichen terms still in use today around the turn of the 18th century. Before that, only a couple of lichen-specific terms had been proposed. Johann Dillenius introduced scyphus in 1742 to describe the cup-shaped structures associated with genus Cladonia , while in 1794 Michel Adanson used lirella for the furrowed fruitbodies of the genus Graphis . Acharius introduced numerous terms to describe lichen structures, including apothecium , cephalodium , cyphellae , podetium , proper margin , soredium , and thallus . In 1825, Friedrich Wallroth published the first of his multi-volume work Naturgeschichte der Flechten ("Natural History of Lichens"), in which he proposed an alternative terminology based largely on roots from the Greek language. His work, presented as an alternative to that of Acharius (of whom he was critical) was not well received, and the only terms he proposed to gain widespread acceptance were epi- and hypophloeodal , hetero- and homoiomerous , and gonidium , the last of which remained in use until the 1960s. [3] Until about 1850, there were 21 terms for features of the lichen thallus that remain in use today. [3]
The increasing availability of the optical microscope as an aid to identifying and characterizing lichens led to the creation of new terms to describe structures that were previously too small to be visualized. Contributions were made by Julius von Flotow (e.g. epithecium ), Edmond Tulasne (e.g pycnidium ), and William Nylander (e.g. pseudocyphella , thecium ). Gustav Wilhelm Körber, an early proponent of using spore structure as a character in lichen taxonomy, introduced amphithecium , muriform , and "polari-dyblastae", later anglicized to "polari-bilocular" and then shortened to polarilocular . [4] In the next five decades that followed, many other additions were made to the repertoire of lichen terms, subsequent to the increased understanding of lichen anatomy and physiology made possible by microscopy. For whatever reasons, there were not any new terms (still currently used) introduced from the period 1906 to 1945, when Gustaf Einar Du Rietz proposed replacing epi- and hypothecium with epi- and subhymenium ; all four terms remain in use. [4] In some cases, older terminology became obsolete as better understanding of the nature of the fungal–algal relationship led to changes in their terminology. For example, after Gunnar Degelius objected to the use of gonidia for the algal partner, George Scott proposed the use of mycobiont and phycobiont for lichen components, recommendations that were generally accepted by lichenologists. [5]
This glossary includes terms defining features of lichens unique to their composite nature, such as the major components the two major components of lichens ( mycobiont and photobiont ); specialized structures in lichen physiology; descriptors of types of lichens; two- and three-dimensional shapes used to describe spores and other lichen structures; terms of position and shape; prefixes and suffixes commonly used to form lichen terms; terminology used in methods for the chemical identification of lichens; the names of 22 standard insoluble lichen pigments and their associated reference species; and "everyday" words that have a specialized meaning in lichenology. The list also includes a few historical terms that have been supplanted or are now considered obsolete. Familiarity with these terms is helpful for understanding older literature in the field.
Psora is a genus of lichen-forming fungi in the family Psoraceae. Members of the genus are commonly called fishscale lichens. Lichens in the genus Psora generally have a squamulose thallus and anthraquinones in the hymenium. Photobiont partners of Psora lichens include members of the green algal genera Asterochloris, Chloroidium, Myrmecia, and Trebouxia.
Mazosia is a genus of lichen-forming fungi in the family Roccellaceae.
Megalaria is a genus of lichen-forming fungi in the family Ramalinaceae. It contains 44 species of crustose lichens, the majority of which grow on bark.
A foliose lichen is a lichen with flat, leaf-like lobes, which are generally not firmly bonded to the substrate on which it grows. It is one of the three most common growth forms of lichens. It typically has distinct upper and lower surfaces, each of which is usually covered with a cortex; some, however, lack a lower cortex. The photobiont layer lies just below the upper cortex. Where present, the lower cortex is usually dark, but occasionally white. Foliose lichens are attached to their substrate either by hyphae extending from the cortex or medulla, or by root-like structures called rhizines. The latter, which are found only in foliose lichens, come in a variety of shapes, the specifics of which can aid in species identification. Some foliose lichens attach only at a single stout peg called a holdfast, typically located near the lichen's centre. Lichens with this structure are called "umbilicate". In general, medium to large epiphytic foliose lichens are moderately sensitive to air pollution, while smaller or ground-dwelling foliose lichens are more tolerant. The term "foliose" derives from the Latin word foliosus, meaning "leafy".
Lichens are symbiotic organisms made up of multiple species: a fungus, one or more photobionts and sometimes a yeast. They are regularly grouped by their external appearance – a characteristic known as their growth form. This form, which is based on the appearance of vegetative part of the lichen, varies depending on the species and the environmental conditions it faces. Those who study lichens (lichenologists) have described a dozen of these forms: areolate, byssoid, calicioid, cladoniform, crustose, filamentous, foliose, fruticose, gelatinous, leprose, placoidioid and squamulose. Traditionally, crustose (flat), foliose (leafy) and fruticose (shrubby) are considered to be the three main forms. In addition to these more formalised, traditional growth types, there are a handful of informal types named for their resemblance to the lichens of specific genera. These include alectorioid, catapyrenioid, cetrarioid, hypogymnioid, parmelioid and usneoid.
Lichen morphology describes the external appearance and structures of a lichen. These can vary considerably from species to species. Lichen growth forms are used to group lichens by "vegetative" thallus types, and forms of "non-vegetative" reproductive parts. Some lichen thalli have the aspect of leaves ; others cover the substrate like a crust, others such as the genus Ramalina adopt shrubby forms, and there are gelatinous lichens such as the genus Collema.
Megaspora is a genus of lichen-forming fungi in the family Megasporaceae. It contains four species of crustose lichens that typically grow on soil, bryophytes, or plant litter on chalky substrates.
Clandestinotrema is a genus of lichen-forming fungi in the family Graphidaceae. It has 18 species. They typically inhabit montane and cloud forest at higher elevations in the tropics.
Ampliotrema sorediatum, a corticolous lichen, is a species in the family Graphidaceae. It was discovered in the tropical lowland rainforest of Peru. The species epithet sorediatum refers to the unusual sorediate thallus, which distinguishes this species from its closest relative, Ampliotrema lepadinoides. The lichen was described as a new species in 2008 by lichenologists Eimy Rivas Plata and Robert Lücking.
Compositrema cerebriforme is a species of corticolous (bark-dwelling) lichen in the family Graphidaceae. It is notable for its distinct structure and resemblance to the shape of a brain. It was discovered in the greenery of Venezuela's Henri Pittier National Park, and described as a new species in 2012.
Gyalideopsis aptrootii is a species of corticolous lichen in the family Gomphillaceae. Found in southern Brazil, it was described as a new species in 2018. Defining features of this lichen include the unique crescent-shaped structure of its hyphophores, the single-spored asci, and the relatively small size of the ascospores.
Lempholemma polycarpum is a little-known species of saxicolous (rock-dwelling) lichen in the family Lichinaceae. It was first described from Yemen and is characterised by its blackish thallus, abundant small apothecia, and cyanobacteria from the genus Nostoc as its photobiont. The lichen is found on inclined limestone boulders in sun-exposed habitats with open forest vegetation. It also occurs in Madagascar and in Aldabra.
Gyrotrema papillatum is a little-known species of corticolous (bark-dwelling), crustose lichen in the family Harpidiaceae. It is known from a single collection in a lowland rainforest region of Costa Rica.
Eilifdahlia sergeyana is a species of saxicolous (rock-dwelling), crustose lichen in the family Teloschistaceae. It is endemic to Kangaroo Island in South Australia. The lichen thallus has an uneven and scaly texture, forming patches up to 40 mm wide in dull greenish-grey or brownish-grey. Its fruiting bodies (apothecia) are orange to yellow, with a biatorine structure, and range from 0.5 to 1 mm wide. These apothecia have a matte surface and a cup-shaped margin containing golden-yellow crystals. The paraphyses within are slender and branched, and the asci contain ellipsoid spores.
Ocellularia vizcayensis is a rare species of corticolous (bark-dwelling) lichen in the family Graphidaceae. It is known from a single collection made in Luzon, Philippines. The lichen thallus is a white, irregularly structured, areolate surface with a layer that includes a photosynthetic partner, both containing large calcium oxalate crystals. Its fruiting bodies are either embedded or protruding, round, with very narrow openings, and contain large, oblong, colorless spores that turn violet-blue when stained with iodine.
Glaucomaria carpinea is a species of corticolous (bark-dwelling), crustose lichen in the family Lecanoraceae. It is a widely distributed species.
Myochroidea is a genus of lichen-forming fungi of uncertain familial placement in the order Lecanorales. It has four species of grey or brown-grey crustose lichens.
Pycnotrema is a small genus of lichen-forming fungi in the family Graphidaceae. Its two species are characterised by their small, rounded apothecial pores.
Pseudoheppia is a fungal genus in the family Lichinaceae. It contains a single species, Pseudoheppia schuleri, a saxicolous (rock-dwelling) squamulose lichen.
Pseudopeltula is a genus of lichen-forming fungi in the family Gloeoheppiaceae. Established in 1995 by the lichenologist Aino Henssen, the genus currently includes four recognised species. These small cyanolichens are characterised by their squamulose (scaly) to peltate (shield-shaped) thalli, which lack a lower cortex and are attached to the substrate by rhizines. A key feature of Pseudopeltula is its complex apothecia, which have hymenia that often become divided by sterile tissue as they mature. The genus is primarily found in arid and semi-arid regions of North America, Mexico, and the Caribbean, where species typically grow on soil, rock, or thin soil over rock, often forming part of biological soil crusts in desert environments.