Ectocarpus siliculosus | |
---|---|
E. siliculosus, from the Brockhaus and Efron Encyclopedic Dictionary (1890-1907) | |
Scientific classification | |
Clade: | SAR |
Phylum: | Ochrophyta |
Class: | Phaeophyceae |
Order: | Ectocarpales |
Family: | Ectocarpaceae |
Genus: | Ectocarpus |
Species: | E. siliculosus |
Binomial name | |
Ectocarpus siliculosus | |
Ectocarpus siliculosus is a filamentous brown alga. [1] Its genome was the first brown macroalgal genome to be sequenced, [2] with the expectation that E. siliculosus will serve as a genetic and genomic model for brown macroalgae. [3]
Scientific classification | |
---|---|
Clade: | SAR |
Phylum: | Ochrophyta |
Class: | Phaeophyceae |
Order: | Ectocarpales |
Family: | Ectocarpaceae |
Genus: | Ectocarpus |
Species: | E. siliculosus |
Binomial name | |
Ectocarpus siliculosus |
The brown algae are members of the stramenopiles (along with organisms such as diatoms and oomycetes). [4] The stramenopiles diverged from other major eukaryotic groups such as the opisthokonts (animals and fungi) and the archaeplastida (which includes land plants) over a billion years ago. [1] The brown algae are also important because they are one of only a small number of eukaryotic groups that have evolved complex multicellularity. [4]
The alga is unbranched and filamentous; [4] it forms soft beards on larger plants or other firm substrata and grows up to 2 feet long. [5] Its thallus is filamentous, initially organized as a main primary filament composed of elongated cells and round cells, from which branches differentiate. [5] E. siliculosus is a tufted plant, often only one to a few cm tall, but in exceptional cases up to 20 cm. [1] It has axes that are freely branched, and the main axis is not distinguishable. [6] Filaments on E. siliculosus can grow up to 30μm in diameter, tapering toward the apices and sometimes forming terminal pseudo hairs. [6]
E. siliculosus reproduction and growth involves two different patterns of early development, which begin with either a symmetric or an asymmetric division of the initial cell. [7] Symmetric division leads to the development of a prostrate, basal structure before the erect thallus is formed. [2] Asymmetric division leads to the immediate development of an erect thallus without the formation of a prostrate, basal structure (immediate differentiation). [8] E. siliculosus alternates between two generational life cycles that differ in either being sporophytes ( produce few laterals and develop from a branched prostrate base) or gametophytes ( richly branched and devoid of a prostrate base). [8] E. siliculosus gametophytes have an asymmetric initial cell division and immediate differentiation of an erect thallus. The alternation of the two different generations in E. siliculosus therefore alternates between symmetric and asymmetric cell divisions as well. [8]
E. siliculosus develops uniseriate filaments. It has a sporophyte body which is made up of the prostrate body and the upright body. [8] The prostrate body is in turn composed of crawling filaments ( crawling filaments are made of Elongated (E) cells and Round (R) cells) which is a filament with E cells on the edges and R cells in the center. [8] Then, there is a period of secondary growth in which axes develop in the center of the primary filament and on the R cells. [8] The upright filaments will grow from the prostrate body and differentiate into sporangia. [5]
Brown algae have many unique characteristics in terms of their metabolism and cell biology. Ergo, brown algae and in particular, E. siliculosus, are often used for explorative research. Its genome was the first brown macroalgal genome to be sequenced, with the expectation that E. siliculosus will serve as a genetic and genomic model for brown macroalgae. [7] In 2004, many laboratories, including the Station Biologique in Roscoff and Genoscope, began to sequence the genome of E. siliculosus. [1]
Ectocarpus has been used by researchers to study the evolution of complex multicellularity in brown algae. With the study of Ectocarpus came the discovery of multiple genetic and genomic resources that apply to all species of brown algae. Before, the lack of both the proper tools to study genome data and genome data itself halted the progress of understanding brown algal developmental processes at the molecular level. [6] However, due to Ectocarpus being less complex, it is easier to study. [6]
E. siliculosus is able to accumulate high concentrations of iodide from seawater. [3] The carbon storage system of brown algae is unusual, involving the accumulation of reserves of mannitol and the β-1,3-glucan laminarin rather than α-1,4-glucans such as starch or glycogen. [4] The mannitol pathway was probably most likely a speciation event in the brown algal lineage via a horizontal transfer event from actinobacteria, along with another key metabolic pathway in brown algae, alginate biosynthesis. [4]
This species of Ectocarpus has been shown to bind iron on its cells with non-specificity. [7] This iron ion shell allows the algae to store and have a constant source of iron regardless of the conditions of the surrounding environment. This adaptation is important because this method of iron uptake is similar to that of terrestrial organisms and differs from the methods typically used in the marine environment such as siderophores. [7]
Ectocarpus is a species known for its evolution of sex-based gene expression. It has also been found to have a low level of phenotypic sexual dimorphism. [7] Having a low level of sexual dimorphism means that two sexes of a species do not have different characteristics. This has been backed up by the findings that Ectocarpus has female genes that evolve as rapidly as their male genes. [7] This is also backed up by the findings that the consistency in the patterns that scientists found with its sexual systems relating to UV haploid systems. [7]
A lichen is a composite organism that arises from algae or cyanobacteria living among filaments of multiple fungi species in a mutualistic relationship. Lichens have properties different from those of their component organisms. They come in many colors, sizes, and forms and are sometimes plant-like, but lichens are not plants. They may have tiny, leafless branches (fruticose); flat leaf-like structures (foliose); crust-like, adhering tightly to a surface (substrate) like a thick coat of paint (crustose); a powder-like appearance (leprose); or other growth forms.
Brown algae, comprising the class Phaeophyceae, are a large group of multicellular algae, including many seaweeds located in colder waters within the Northern Hemisphere. Brown algae are the major seaweeds of the temperate and polar regions. They are dominant on rocky shores throughout cooler areas of the world. Most brown algae live in marine environments, where they play an important role both as food and as a potential habitat. For instance, Macrocystis, a kelp of the order Laminariales, may reach 60 m (200 ft) in length and forms prominent underwater kelp forests. Kelp forests like these contain a high level of biodiversity. Another example is Sargassum, which creates unique floating mats of seaweed in the tropical waters of the Sargasso Sea that serve as the habitats for many species. Many brown algae, such as members of the order Fucales, commonly grow along rocky seashores. Some members of the class, such as kelps, are used by humans as food.
Oomycota forms a distinct phylogenetic lineage of fungus-like eukaryotic microorganisms, called oomycetes. They are filamentous and heterotrophic, and can reproduce both sexually and asexually. Sexual reproduction of an oospore is the result of contact between hyphae of male antheridia and female oogonia; these spores can overwinter and are known as resting spores. Asexual reproduction involves the formation of chlamydospores and sporangia, producing motile zoospores. Oomycetes occupy both saprophytic and pathogenic lifestyles, and include some of the most notorious pathogens of plants, causing devastating diseases such as late blight of potato and sudden oak death. One oomycete, the mycoparasite Pythium oligandrum, is used for biocontrol, attacking plant pathogenic fungi. The oomycetes are also often referred to as water molds, although the water-preferring nature which led to that name is not true of most species, which are terrestrial pathogens.
A multicellular organism is an organism that consists of more than one cell, in contrast to a unicellular organism.
The green algae are a large, informal grouping of algae consisting of the Chlorophyta and Charophyta/Streptophyta, which are now placed in separate divisions, together with the more basal Mesostigmatophyceae, Chlorokybophyceae and Spirotaenia.
A coenocyte is a multinucleate cell which can result from multiple nuclear divisions without their accompanying cytokinesis, in contrast to a syncytium, which results from cellular aggregation followed by dissolution of the cell membranes inside the mass. The word syncytium in animal embryology is used to refer to the coenocytic blastoderm of invertebrates. A coenocytic cell is referred to as a coenobium, and most coenobia are composed of a distinct number of cells, often as a multiple of two.
Paramecia is a non-mineralized Ediacaran alga with a differentiated, compartmentalized thallus. This alga probably had multiple phases in its lifecycle, as possible reproductive structures have been identified.
Phycodnaviridae is a family of large (100–560 kb) double-stranded DNA viruses that infect marine or freshwater eukaryotic algae. Viruses within this family have a similar morphology, with an icosahedral capsid. As of 2014, there were 33 species in this family, divided among 6 genera. This family belongs to a super-group of large viruses known as nucleocytoplasmic large DNA viruses. Evidence was published in 2014 suggesting that specific strains of Phycodnaviridae might infect humans rather than just algal species, as was previously believed. Most genera under this family enter the host cell by cell receptor endocytosis and replicate in the nucleus. Phycodnaviridae play important ecological roles by regulating the growth and productivity of their algal hosts. Algal species such Heterosigma akashiwo and the genus Chrysochromulina can form dense blooms which can be damaging to fisheries, resulting in losses in the aquaculture industry. Heterosigma akashiwo virus (HaV) has been suggested for use as a microbial agent to prevent the recurrence of toxic red tides produced by this algal species. Phycodnaviridae cause death and lysis of freshwater and marine algal species, liberating organic carbon, nitrogen and phosphorus into the water, providing nutrients for the microbial loop.
Ectocarpales is a very large order in the brown algae. The order includes families with pseudoparenchymatous (Splachnidiaceae) or true parenchymatous (Scytosiphonaceae) tissue. Pseudoparenchymatous refers to a filamentous alga with cells packed very close together to give an appearance of parenchymatous tissue, the latter being composed of cells which can truly divide in three dimensions, unusual among the algae. Filamentous algae are composed of cells that divide along a single plane, allowing only elongation to form filaments of one or more rows of cells. Algae that can divide in two planes can form sheet-like thalli or bodies. Cells that can divide in a third plane potentially allow for the organism to develop a more complex body plan, and diversification of body plans into an erect thallus of some sort and a holdfast for attaching the upright portion to the substrate.
Polysiphonia is a genus of filamentous red algae with about 19 species on the coasts of the British Isles and about 200 species worldwide, including Crete in Greece, Antarctica and Greenland. Its members are known by a number of common names. It is in the order Ceramiales and family Rhodomelaceae.
Conceptacles are specialized cavities of marine and freshwater algae that contain the reproductive organs. They are situated in the receptacle and open by a small ostiole. Conceptacles are present in Corallinaceae, and Hildenbrandiales, as well as the brown Fucales. In the Fucales there is no haploid phase in the reproductive cycle and therefore no alternation of generations. The thallus is a sporophyte. The diploid plants produce male (antheridia) and female (oogonia) gametangia by meiosis. The gametes are released into the surrounding water; after fusion, the zygote settles and begins growth.
Myriotrichia is a genus of brown algae.
Red algae, or Rhodophyta, are one of the oldest groups of eukaryotic algae. The Rhodophyta also comprises one of the largest phyla of algae, containing over 7,000 currently recognized species with taxonomic revisions ongoing. The majority of species (6,793) are found in the Florideophyceae (class), and mostly consist of multicellular, marine algae, including many notable seaweeds. Red algae are abundant in marine habitats but are relatively rare in freshwaters. Approximately 5% of the red algae occur in freshwater environments with greater concentrations found in warmer areas. Except for two coastal cave dwelling species in the asexual class Cyanidiophyceae, there are no terrestrial species, which may be due to an evolutionary bottleneck where the last common ancestor lost about 25% of its core genes and much of its evolutionary plasticity.
Volvox carteri is a species of colonial green algae in the order Volvocales. The V. carteri life cycle includes a sexual phase and an asexual phase. V. carteri forms small spherical colonies, or coenobia, of 2000–6000 Chlamydomonas-type somatic cells and 12–16 large, potentially immortal reproductive cells called gonidia. While vegetative, male and female colonies are indistinguishable; however, in the sexual phase, females produce 35-45 eggs and males produce up to 50 sperm packets with 64 or 128 sperm each.
Thallophyca is a non-mineralized Ediacarian alga that probably dwelt on the sea floor. Its thallus is differentiated into a cortex and a medulla. Possible reproductive structures have been identified.
Ectocarpus is a genus of filamentous brown alga that is a model organism for the genomics of multicellularity. Among possible model organisms in the brown algae, Ectocarpus was selected for the relatively small size of its mature thallus and the speed with which it completes its life cycle. The type species for the genus is Ectocarpus siliculosus (Dillwyn) Lyngbye. The life history is an isomorphic to slightly kiheteromorphic alternation of generations, but asexual strains also exist.
Acinetospora crinita is a species of brown alga in the family Acinetosporaceae. It is found in the temperate northeastern Atlantic Ocean and the Mediterranean Sea.
Cyanobacteria are a large and diverse phylum of bacteria defined by their unique combination of pigments and their ability to perform oxygenic photosynthesis.
Germ-Soma Differentiation is the process by which organisms develop distinct germline and somatic cells. The development of cell differentiation has been one of the critical aspects of the evolution of multicellularity and sexual reproduction in organisms. Multicellularity has evolved upwards of 25 times, and due to this there is great possibility that multiple factors have shaped the differentiation of cells. There are three general types of cells: germ cells, somatic cells, and stem cells. Germ cells lead to the production of gametes, while somatic cells perform all other functions within the body. Within the broad category of somatic cells, there is further specialization as cells become specified to certain tissues and functions. In addition, stem cell are undifferentiated cells which can develop into a specialized cell and are the earliest type of cell in a cell lineage. Due to the differentiation in function, somatic cells are found ony in multicellular organisms, as in unicellular ones the purposes of somatic and germ cells are consolidated in one cell.
Padina is a genus of brown macroalgae in the family Dictyotaceae.