Herbaspirillum

Last updated

Herbaspirillum
Scientific classification OOjs UI icon edit-ltr.svg
Domain: Bacteria
Phylum: Pseudomonadota
Class: Betaproteobacteria
Order: Burkholderiales
Family: Oxalobacteraceae
Genus: Herbaspirillum
Baldani et al. 1986
Type species
Herbaspirillum seropedicae
Species

H. aquaticum [1]
H. autotrophicum [1]
H. chlorophenolicum
H. frisingense
H. hiltneri
H. huttiense
H. lusitanum
H. massiliense [2]
H. rhizosphaerae
H. rubrisubalbicans
H. seropedicae

Herbaspirillum is a genus of bacteria, including the nitrogen-fixing Herbaspirillum lusitanum. [3]

Although usually found in soil environments, it has also been identified as a contaminant of DNA extraction kit reagents, which may lead to its erroneous appearance in microbiota or metagenomic datasets. [4]

Related Research Articles

Sphingopyxis is a bacterial genus.

<i>Variovorax</i> Genus of bacteria

Variovorax is a Gram-negative and motile genus of bacteria from the family Comamonadaceae. It belong to the class called Betaproteobacteria. It is an aerobic bacteria and most of its species is found in soil and freshwater. The demographic distribution of this species is primarily in Europe, Asia and the Americas, as well as the polar regions. Its designated species is Variovorax paradoxus which arose from the species Alcaligenes paradoxus being grouped under the Variovorax genus. Variovorax paradoxus constitutes to the methylotrophic microbiota of the human mouth.

The Lachnospiraceae are a family of obligately anaerobic, variably spore-forming bacteria in the order Eubacteriales that ferment diverse plant polysaccharides to short-chain fatty acids and alcohols (ethanol). These bacteria are among the most abundant taxa in the rumen and the human gut microbiota. Members of this family may protect against colon cancer in humans by producing butyric acid. Lachnospiraceae have been found to contribute to diabetes in genetically susceptible (ob/ob) germ-free mice.

Acidicapsa is a bacterial genus from the family of Acidobacteriaceae.

Sediminitomix is a genus from the family of Flammeovirgaceae with one known species.

Flavilitoribacter nigricans is a bacterium from the family Saprospiraceae which has been isolated from beach sand near Lagos in Nigeria.

Marinomonas is an aerobic bacteria genus from the family of Oceanospirillaceae.

Nitriliruptor alkaliphilus is a non-spore-forming and non-motile bacterium from the genus Nitriliruptor which has been isolated from sediments from a soda lake in Siberia in Russia.

Noviherbaspirillum is a genus of bacteria in the family of Oxalobacteraceae.

Noviherbaspirillum malthae is a Gram-negative, aerobic and rod-shaped bacterium from the genus of Noviherbaspirillum which has beenn isolated from Kaohsiung County in Taiwan.

Noviherbaspirillum psychrotolerans is a Gram-negative, psychrotolerant, facultatively anaerobic and curved-rod-shaped bacterium from the genus of Noviherbaspirillum which has been isolated from soil of a glacier forefield from the Larsemann Hills from the Antarctica.

Paucisalibacillus is a genus of bacteria from the family of Bacillaceae.

Salipaludibacillus is a gram-positive genus of bacteria from the family of Bacillaceae.

Salirhabdus is a genus of bacteria from the family of Bacillaceae.

Chitinispirillum is a genus of bacteria from the family of Chitinispirillaceae with one known species. Chitinispirillum alkaliphilum has been isolated from hypersaline lake sediments from the Wadi el Natrun valley in Egypt.

Acidicapsa dinghuensis is a Gram-negative, aerobic and non-motile bacterium from the genus of Acidicapsa which has been isolated from forest soil from the Dinghushan Biosphere Reserve in China.

Noviherbaspirillum autotrophicum is a Gram-negative and rod-shaped bacterium from the genus of Noviherbaspirillum which has been isolated from rice paddy soil.

Noviherbaspirillum massiliense is a bacterium from the genus of Noviherbaspirillum which has been isolated from human faeces.

Marinifilum is a genus of bacteria from the family of Marinifilaceae.

Niabella is a genus of bacteria from the family of Chitinophagaceae.

References

  1. 1 2 "Archived copy". Archived from the original on 2016-03-04. Retrieved 2013-01-14.{{cite web}}: CS1 maint: archived copy as title (link)
  2. Parte, A.C. "Herbaspirillum". LPSN .
  3. Parker, Charles Thomas; Wigley, Sarah; Garrity, George M (2009). Parker, Charles Thomas; Garrity, George M (eds.). "Nomenclature Abstract for Herbaspirillum Baldani et al. 1986 emend. Carro et al. 2012". The NamesforLife Abstracts. doi:10.1601/nm.1705 (inactive 2024-04-17).{{cite journal}}: CS1 maint: DOI inactive as of April 2024 (link)
  4. Salter, S; Cox, M; Turek, E; Calus, S; Cookson, W; Moffatt, M; Turner, P; Parkhill, J; Loman, N; Walker, A (2014). "Reagent contamination can critically impact sequence-based microbiome analyses". bioRxiv   10.1101/007187 .