Lymphocystivirus

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Lymphocystivirus
Virus classification OOjs UI icon edit-ltr.svg
(unranked): Virus
Realm: Varidnaviria
Kingdom: Bamfordvirae
Phylum: Nucleocytoviricota
Class: Megaviricetes
Order: Pimascovirales
Family: Iridoviridae
Subfamily: Alphairidovirinae
Genus:Lymphocystivirus

Lymphocystivirus is a genus of viruses, in the family Iridoviridae . [1] Fish serve as natural hosts. There are four species in this genus. [1] Diseases associated with this genus include: tumor-like growths on the skin. [1] [2]

Contents

Hosts

Lymphocystivirus is one of six genera of viruses within the viral family Iridoviridae , and one of three genera within this family which infect teleost fishes, along with Megalocytivirus and Ranavirus . [3] Lymphocystiviruses infect more than 140 freshwater and marine species, [4] spanning at least 42 host families worldwide, [5] causing the chronic, self-limiting clinical disease, lymphocystis. While lymphocystis does not cause mass mortality events like megalocytiviruses and ranaviruses, fish with lymphocystis exhibit grossly visible papilloma-like skin lesions which substantially reduce their commercial value. [6] [7] No vaccines are currently available for lymphocystis viruses. [6]

Taxonomy

The genus contains the following species: [8]

LCDV genome

Lymphocystiviruses are Group I viruses with a dsDNA genome. The LCDV-1 genome is approximately 102.7 kilobase pairs (kbp) in length, with 195 potential open reading frames (ORF), and codes for two DNA-dependent RNA polymerase subunits, a DNA methyltransferase, a DNA polymerase, a guanosine triphosphate phosphohydrolase (GTPase), a helicase, protein kinases, a ribonucleoside diphosphate reductase, and zinc-finger proteins, among others. [9] The LCDV-2 genome is similar to that of LCDV-1 but is slightly smaller, approximately 98 kilobase pairs (kbp) in length. [10]

Structure

Viruses in the genus Lymphocystivirus are enveloped, with icosahedral and polyhedral geometries, and T=189-217 symmetry. The diameter is around 120-350 nm. Genomes are linear, around 100kb in length. [1] [2]

GenusStructureSymmetryCapsidGenomic arrangementGenomic segmentation
LymphocystivirusPolyhedralT=189-217LinearMonopartite

Life cycle

Lymphocystiviruses attach to the host cell and enter by receptor-mediated endocytosis similar to other iridoviruses. [11] Viral particles are uncoated and move to the nucleus of the cell, where DNA replication begins via a virally encoded DNA polymerase. [12] Viral DNA then moves to the cytoplasm for the second stage of DNA replication, which results in the formation of DNA concatemers. [12] The concatameric viral DNA is subsequently packaged via a headful mechanism into virions. [13] The lymphocystis viral genome is circularly permuted with terminally redundant DNA. [12] DNA-templated transcription is the method of transcription. Fish serve as the natural host. [1] [2]

GenusHost detailsTissue tropismEntry detailsRelease detailsReplication siteAssembly siteTransmission
LymphocystivirusFishNoneCell receptor endocytosisLysis; buddingNucleusCytoplasmUnknown

Pathogenesis

Lymphocystis disease is a chronic disease that rarely causes mortality. [4] Infection causes transformation and hypertrophy (approximately 1000x) of cells in the dermis, forming grossly visible lymphocystis nodules, as well as transformation and hypertrophy in cells of the connective tissues of various internal organs. [4] Fibroblasts and osteoblasts are specifically targeted by the virus. [14] Lymphocystis viruses are not easily grown in cell culture, [4] placing limitations on in vitro molecular pathogenesis experiments.

Diagnostic pathology

As lymphocystis viruses are not easily grown in cell culture, [4] diagnosis is based on clinical signs, gross pathology, histopathology, serology, and/or polymerase chain reaction (PCR)-based molecular assays.

Gross pathology

The pathology of lymphocystis consists of papilloma-like skin lesions composed of greatly hypertrophied infected host cells embedded in extracellular matrix, sometimes called lymphocystis tumor cells, which are grossly evident as white spots on the skin and fins of infected fish. [15] These lesions proliferate as epithelial tumors in some cases. [16]

Histopathology

In a recent comparison of lymphocystis histopathology of four unrelated marine species, lesions consistently associated with lymphocystis included hypertrophied cells displaying irregular nuclei, basophilic cytoplasmic inclusion bodies that stained positively via Feulgen and Mann's reaction and Periodic acid-Shiff (PAS)-positive hyaline capsules. [5] Hyaline capsules arise from the extracellular matrix that is produced by the infected cells, [14] and are composed of sulphated and carboxylated glycoproteins (acid mucopolysaccharides). [14] In contrast, the inclusion body shape, distribution of viral particles within the cytoplasm and overall appearance of lymphocystis nodules varied by species. [5] The species examined in this study included the white-spotted puffer ( Arothron hispidus ), the Japanese sea bass ( Lateolabrax japonicus ), olive flounder ( Paralichthys olivaceus ) and the "sting fish" or Schlegel's black rockfish ( Sebastes schegeli ) [5]

Serology

Several serologic assays have been developed to identify LCDV infections, including flow cytometry, [17] immunoblot, [17] [18] and immunofluorescence. [17] However, PCR-based molecular assays are more practical for most applications. [6]

Electron microscopy

Transmission electron microscopy (TEM) of infected cells reveals cytoplasmic virus particles typically measuring from 198-227 nm in diameter [4] (in some cases as large as 380 nm) [4] [14] and electron-dense substances in the perinuclear space. [5]

Molecular pathology

Published PCR primers and protocol are available to amplify a portion of the LCDV-1 MCP. [6] When the PCR diagnostic assay is combined with slot blot, diagnostic sensitivity is increased, facilitating the diagnosis of asymptomatic LCDV-1 infections. [6]

Related Research Articles

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Virology is the scientific study of biological viruses. It is a subfield of microbiology that focuses on their detection, structure, classification and evolution, their methods of infection and exploitation of host cells for reproduction, their interaction with host organism physiology and immunity, the diseases they cause, the techniques to isolate and culture them, and their use in research and therapy.

<i>Parvoviridae</i> Family of viruses

Parvoviruses are a family of animal viruses that constitute the family Parvoviridae. They have linear, single-stranded DNA (ssDNA) genomes that typically contain two genes encoding for a replication initiator protein, called NS1, and the protein the viral capsid is made of. The coding portion of the genome is flanked by telomeres at each end that form into hairpin loops that are important during replication. Parvovirus virions are small compared to most viruses, at 23–28 nanometers in diameter, and contain the genome enclosed in an icosahedral capsid that has a rugged surface.

<i>Hepadnaviridae</i> Family of viruses

Hepadnaviridae is a family of viruses. Humans, apes, and birds serve as natural hosts. There are currently 18 species in this family, divided among 5 genera. Its best-known member is hepatitis B virus. Diseases associated with this family include: liver infections, such as hepatitis, hepatocellular carcinomas, and cirrhosis. It is the sole accepted family in the order Blubervirales.

<i>Lyssavirus</i> Genus of viruses

Lyssavirus is a genus of RNA viruses in the family Rhabdoviridae, order Mononegavirales. Mammals, including humans, can serve as natural hosts. The genus Lyssavirus includes the rabies virus traditionally associated with the disease of the same name.

<i>Poxviridae</i> Family of viruses

Poxviridae is a family of double-stranded DNA viruses. Vertebrates and arthropods serve as natural hosts. There are currently 83 species in this family, divided among 22 genera, which are divided into two subfamilies. Diseases associated with this family include smallpox.

<i>Geminiviridae</i> Family of viruses

Geminiviridae is a family of plant viruses that encode their genetic information on a circular genome of single-stranded (ss) DNA. There are 520 species in this family, assigned to 14 genera. Diseases associated with this family include: bright yellow mosaic, yellow mosaic, yellow mottle, leaf curling, stunting, streaks, reduced yields. They have single-stranded circular DNA genomes encoding genes that diverge in both directions from a virion strand origin of replication. According to the Baltimore classification they are considered class II viruses. It is the largest known family of single stranded DNA viruses.

<span class="mw-page-title-main">Orthoherpesviridae</span> Family of DNA viruses

Herpesviridae is a large family of DNA viruses that cause infections and certain diseases in animals, including humans. The members of this family are also known as herpesviruses. The family name is derived from the Greek word ἕρπειν, referring to spreading cutaneous lesions, usually involving blisters, seen in flares of herpes simplex 1, herpes simplex 2 and herpes zoster (shingles). In 1971, the International Committee on the Taxonomy of Viruses (ICTV) established Herpesvirus as a genus with 23 viruses among four groups. As of 2020, 115 species are recognized, all but one of which are in one of the three subfamilies. Herpesviruses can cause both latent and lytic infections.

<span class="mw-page-title-main">Sheeppox</span> Infectious disease of sheep caused by the sheeppox virus

Sheeppox is a highly contagious disease of sheep caused by a poxvirus different from the benign orf. This virus is in the family Poxviridae and genus Capripoxvirus. Sheeppox virus (SPV) is the most severe of all the animal pox diseases and can result in some of the most significant economic consequences due to poor wool and leather quality.

Avipoxvirus is a genus of viruses within the family Poxviridae. Poxviridae is the family of viruses which cause the afflicted organism to have poxes as a symptom. Poxviruses have generally large genomes, and other such examples include smallpox and monkeypox. Members of the genus Avipoxvirus infect specifically birds. Avipoxviruses are unable to complete their replication cycle in non-avian species. Although it is comparably slow-spreading, Avipoxvirus is known to cause symptoms like pustules full of pus lining the skin and diphtheria-like symptoms. These diphtheria-like symptoms might include diphtheric necrotic membranes lining the mouth and the upper respiratory tract. Like other avian viruses, it can be transmitted through vectors mechanically such as through mosquitoes. There is no evidence that this virus can infect humans.

<i>Iridoviridae</i> Family of viruses

Iridoviridae is a family of viruses with double-stranded DNA genomes. Amphibians, fish, and invertebrates such as arthropods serve as natural hosts. There are currently 22 species in this family, divided among two subfamilies and seven genera.

<i>Ascoviridae</i> Family of viruses

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<i>Ranavirus</i> Genus of viruses

Ranavirus is a genus of viruses, in the family Iridoviridae. There are six other genera of viruses within the family Iridoviridae, but Ranavirus is the only one that includes viruses that are infectious to amphibians and reptiles. Additionally, it is one of the three genera within this family which infect teleost fishes, along with Lymphocystivirus and Megalocytivirus.

<i>Picobirnavirus</i> Genus of viruses

Picobirnavirus is a genus of double-stranded RNA viruses. It is the only genus in the family Picobirnaviridae. Although amniotes, especially mammals, were thought to serve as hosts, it has been recently suggested that these viruses might infect bacteria and possibly some other invertebrates. There are three species in this genus. Associated symptoms include gastroenteritis in animals and humans, though the disease association is unclear.

Megalocytivirus is a genus of viruses in the family Iridoviridae and one of three genera within this family which infect teleost fishes, along with Lymphocystivirus and Ranavirus. Megalocytiviruses are an emerging group of closely related dsDNA viruses which cause systemic infections in a wide variety of wild and cultured fresh and saltwater fishes. Megalocytivirus outbreaks are of considerable economic importance in aquaculture, as epizootics can result in moderate fish loss or mass mortality events of cultured fishes.

Hytrosaviridae is a family of double-stranded DNA viruses that infect insects. The name is derived from Hytrosa, sigla from the Greek Hypertrophia for 'hypertrophy' and 'sialoadenitis' for 'salivary gland inflammation.'

Chloriridovirus is a genus of viruses, in the family Iridoviridae. Diptera with aquatic larval stage, mainly mosquitoes, lepidoptera, and orthoptera insects serve as natural hosts. There are five species in this genus. Diseases associated with this genus include: yellow-green iridescence beneath the epidermis. Death rates are highest in the fourth instar. Viruses within this genus have been found to infect mosquito larvae, in which they produce various iridescent colors.

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<i>Avian metaavulavirus 2</i> Species of virus

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<i>Riboviria</i> Realm of viruses

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