Brown algae are a large group of multicellular algae comprising the class Phaeophyceae. They include many seaweeds located in colder waters of the Northern Hemisphere. Brown algae are the major seaweeds of the temperate and polar regions. Many brown algae, such as members of the order Fucales, commonly grow along rocky seashores. Most brown algae live in marine environments, where they play an important role both as food and as a potential habitat. For instance, Macrocystis, a kelp of the order Laminariales, may reach 60 m (200 ft) in length and forms prominent underwater kelp forests that contain a high level of biodiversity. Another example is Sargassum, which creates unique floating mats of seaweed in the tropical waters of the Sargasso Sea that serve as the habitats for many species. Some members of the class, such as kelps, are used by humans as food.
The Oomycetes, or Oomycota, form a distinct phylogenetic lineage of fungus-like eukaryotic microorganisms within the Stramenopiles. They are filamentous and heterotrophic, and can reproduce both sexually and asexually. Sexual reproduction of an oospore is the result of contact between hyphae of male antheridia and female oogonia; these spores can overwinter and are known as resting spores. Asexual reproduction involves the formation of chlamydospores and sporangia, producing motile zoospores. Oomycetes occupy both saprophytic and pathogenic lifestyles, and include some of the most notorious pathogens of plants, causing devastating diseases such as late blight of potato and sudden oak death. One oomycete, the mycoparasite Pythium oligandrum, is used for biocontrol, attacking plant pathogenic fungi. The oomycetes are also often referred to as water molds, although the water-preferring nature which led to that name is not true of most species, which are terrestrial pathogens.
The Phytomyxea are a class of parasites that are cosmopolitan, obligate biotrophic protist parasites of plants, diatoms, oomycetes and brown algae. They are divided into the orders Plasmodiophorida and Phagomyxida. Plasmodiophorids are best known as pathogens or vectors for viruses of arable crops.
Synchytrium endobioticum is a chytrid fungus that causes the potato wart disease, or black scab. It also infects some other plants of the genus Solanum, though potato is the only cultivated host.
Phycodnaviridae is a family of large (100–560 kb) double-stranded DNA viruses that infect marine or freshwater eukaryotic algae. Viruses within this family have a similar morphology, with an icosahedral capsid. As of 2014, there were 33 species in this family, divided among 6 genera. This family belongs to a super-group of large viruses known as nucleocytoplasmic large DNA viruses. Evidence was published in 2014 suggesting that specific strains of Phycodnaviridae might infect humans rather than just algal species, as was previously believed. Most genera under this family enter the host cell by cell receptor endocytosis and replicate in the nucleus. Phycodnaviridae play important ecological roles by regulating the growth and productivity of their algal hosts. Algal species such Heterosigma akashiwo and the genus Chrysochromulina can form dense blooms which can be damaging to fisheries, resulting in losses in the aquaculture industry. Heterosigma akashiwo virus (HaV) has been suggested for use as a microbial agent to prevent the recurrence of toxic red tides produced by this algal species. Phycodnaviridae cause death and lysis of freshwater and marine algal species, liberating organic carbon, nitrogen and phosphorus into the water, providing nutrients for the microbial loop.
Powdery scab is a disease of potato tubers. It is caused by the cercozoan Spongospora subterranea f. sp. subterranea and is widespread in potato growing countries. Symptoms of powdery scab include small lesions in the early stages of the disease, progressing to raised pustules containing a powdery mass. These can eventually rupture within the tuber periderm. The powdery pustules contain resting spores that release anisokont zoospores to infect the root hairs of potatoes or tomatoes. Powdery scab is a cosmetic defect on tubers, which can result in the rejection of these potatoes. Potatoes which have been infected can be peeled to remove the infected skin and the remaining inside of the potato can be cooked and eaten.
Durvillaea is a genus of large brown algae in the monotypic family Durvillaeaceae. All members of the genus are found in the southern hemisphere, including Australia, New Zealand, South America, and various subantarctic islands. Durvillaea, commonly known as southern bull kelps, occur on rocky, wave-exposed shorelines and provide a habitat for numerous intertidal organisms. Many species exhibit a honeycomb-like structure in their fronds that provides buoyancy, which allows individuals detached from substrates to raft alive at sea, permitting dispersal for hundreds of days over thousands of kilometres. Durvillaea species have been used for clothing, tools and as a food source by many indigenous cultures throughout the South Pacific, and they continue to play a prominent role in Chilean cuisine.
Durvillaea antarctica, also known as cochayuyo and rimurapa, is a large, robust species of southern bull kelp found on the coasts of Chile, southern New Zealand, and Macquarie Island. D. antarctica, an alga, does not have air bladders, but floats due to a unique honeycomb structure within the alga's blades, which also helps the kelp avoid being damaged by the strong waves.
Ectocarpus siliculosus is a filamentous brown alga. Its genome was the first brown macroalgal genome to be sequenced, with the expectation that E. siliculosus will serve as a genetic and genomic model for brown macroalgae.
Hematodinium is a genus of dinoflagellates. Species in this genus, such as Hematodinium perezi, the type species, are internal parasites of the hemolymph of crustaceans such as the Atlantic blue crab and Norway lobster. Species in the genus are economically damaging to commercial crab fisheries, including causing bitter crab disease in the large Tanner or snow crab fisheries of the Bering Sea.
Ceratiomyxa is a genus of plasmodial slime mould within the Eumycetozoa, first described by Pier Antonio Micheli. They are widely distributed and commonly found on decaying wood.
Parvilucifera is a genus of marine alveolates that behave as endoparasites of dinoflagellates. It was described in 1999 by biologists Fredrik Norén and Øjvind Moestrup, who identified the genus among collections of Dinophysis dinoflagellates off the coast of Sweden. Initially mistaken for products of sexual reproduction, the round bodies found within these collections were eventually recognized as sporangia, spherical structures that generate zoospores of a parasitic protist. This organism was later identified as P. infectans, the type species. The examination of this organism and its close genetic relationship to Perkinsus led to the creation of the Perkinsozoa phylum within the Alveolata group.
Ectocarpus is a genus of filamentous brown alga that is a model organism for the genomics of multicellularity. Among possible model organisms in the brown algae, Ectocarpus was selected for the relatively small size of its mature thallus and the speed with which it completes its life cycle. Tools available for Ectocarpus as a model species include a high quailty genome sequence and both forward and reverse genetic methodologies, the latter based on CRISPR-Cas9.
Plasmodiophora bicaudata is a marine pathogen, an obligate parasite of seagrass of the genus Zostera and the causal agent of wasting disease in the genus. These marine plants grow in fine sediment in shallow seas and the pathogen seems to have a worldwide distribution.
Synchytrium is a large genus of plant pathogens within the phylum Chytridiomycota. Species are commonly known as false rust or wart disease. Approximately 200 species are described, and all are obligate parasites of angiosperms, ferns, or mosses. Early species were mistakenly classified among the higher fungi because of their superficial similarity to the rust fungi. Anton de Bary and Mikhail S. Woronin recognized the true nature of these fungi and established the genus to accommodate Synchytrium taraxaci, which grows on dandelions, and S. succisae, which grows on Succisa pratensis. Synchytrium taraxaci is the type of the genus. The genus has been divided into 6 subgenera based on differences in life cycles.
Physoderma is a genus of chytrid fungi. Described by German botanist Karl Friedrich Wilhelm Wallroth in 1833, the genus contains some species that are parasitic on vascular plants, including P. alfalfae and P. maydis, causative agents of crown wart of alfalfa and brown spot of corn, respectively. Of the chytrid genera, Physoderma is the oldest. However, species were confused with the rust fungi, the genus Synchytrium, and the genus Protomyces of Ascomycota. Members of Physoderma are obligate parasites of pteridophytes and angiosperms. There are approximately 80 species within this genus.
Pythium porphyrae, is a parasitic species of oomycete in the family Pythiaceae. It is the cause of red rot disease or red wasting disease, also called akagusare (赤ぐされ) in Japanese. The specific epithet porphyrae (πορφυρα) stems from the genus of one of its common hosts, Porphyra, and the purple-red color of the lesions on the thallus of the host. However, many of its hosts have been moved from the genus Porphyra to Pyropia.
Phagomyxids are a group of obligate endoparasitic protists belonging to the subphylum Endomyxa in Cercozoa. Taxonomically, they are united under a single family Phagomyxidae, order Phagomyxida, sister to the plasmodiophores.
Tetramyxa parasitica is a species of parasitic cercozoan, member of the plasmodiophorids, that causes gall formation on multiple genera of aquatic plants. It was first discovered on roots of Ruppia and described by Karl von Goebel in 1884 in his work Flora, where it became the type species of the genus Tetramyxa.
Aphelidium tribonemae is a species within the Aphelid group. Their classification in the kingdom Fungi is a subject of controversy. Some argue for the classification of aphelids as ‘fungal animals', and for a period of time in the 1950s, aphids were classified as protists due to their amoeboid stage. Recently, molecular phylogenetics placed the aphelids within Opisthosporidia, a super phylum within Opisthokonta. Aphelids have posterior uniflagellate zoospores which place them as Opisthokonts. They are an early diverging lineage in Kingdom Fungi. While the aphelid group only contains three genera, it spans many both freshwater and marine ecosystems.
