Phytophthora is a genus of plant-damaging oomycetes, whose member species are capable of causing enormous economic losses on crops worldwide, as well as environmental damage in natural ecosystems. The cell wall of Phytophthora is made up of cellulose. The genus was first described by Heinrich Anton de Bary in 1875. Approximately 210 species have been described, although 100–500 undiscovered Phytophthora species are estimated to exist.
Phytophthora cinnamomi, also known as cinnamon fungus, is a soil-borne water mould that produces an infection which causes a condition in plants variously called "dieback", "root rot", or, "ink disease".
Castanea crenata, the Japanese chestnut or Korean chestnut, is a species of chestnut native to Japan and Korea. Castanea crenata exhibits resistance to Phytophthora cinnamomi, the fungal pathogen that causes ink disease in several Castanea species. The mechanism of resistance of Castanea crenata to Phytophthora cinnamomi may derive from its expression of the Cast_Gnk2-like gene.
Phytophthora sojae is an oomycete and a soil-borne plant pathogen that causes stem and root rot of soybean. This is a prevalent disease in most soybean growing regions, and a major cause of crop loss. In wet conditions the pathogen produces zoospores that move in water and are attracted to soybean roots. Zoospores can attach to roots, germinate, and infect the plant tissues. Diseased roots develop lesions that may spread up the stem and eventually kill the entire plant. Phytophthora sojae also produces oospores that can remain dormant in the soil over the winter, or longer, and germinate when conditions are favourable. Oospores may also be spread by animals or machinery.
Phytophthora palmivora is an oomycete that causes bud-rot of palms, fruit-rot or kole-roga of coconut and areca nut. These are among the most serious diseases caused by fungi and moulds in South India. It occurs almost every year in Malnad, Mysore, North & South Kanara, Malabar and other areas. Similar diseases of palms are also known to occur in Sri Lanka, Mauritius, and Sumatra. The causative organism was first identified as P. palmivora by Edwin John Butler in 1917.
Aphanomyces euteiches is a water mould, or oomycete, plant pathogen responsible for the disease Aphanomyces root rot. The species Aphanomyces euteiches can infect a variety of legumes. Symptoms of the disease can differ among hosts but generally include reduced root volume and function, leading to stunting and chlorotic foliage. Aphanomyces root rot is an important agricultural disease in the United States, Europe, Australia, New Zealand, and Japan. Management includes using resistant crop varieties and having good soil drainage, as well as testing soil for the pathogen to avoid infected fields.
Thielaviopsis basicola is the plant-pathogen fungus responsible for black root rot disease. This particular disease has a large host range, affecting woody ornamentals, herbaceous ornamentals, agronomic crops, and even vegetable crops. Examples of susceptible hosts include petunia, pansy, poinsettia, tobacco, cotton, carrot, lettuce, tomato, and others. Symptoms of this disease resemble nutrient deficiency but are truly a result of the decaying root systems of plants. Common symptoms include chlorotic lower foliage, yellowing of plant, stunting or wilting, and black lesions along the roots. The lesions along the roots may appear red at first, getting darker and turning black as the disease progresses. Black root lesions that begin in the middle of a root can also spread further along the roots in either direction. Due to the nature of the pathogen, the disease can easily be identified by the black lesions along the roots, especially when compared to healthy roots. The black lesions that appear along the roots are a result of the formation of chlamydospores, resting spores of the fungus that contribute to its pathogenicity. The chlamydospores are a dark brown-black color and cause the "discoloration" of the roots when they are produced in large amounts.
Phytophthora cactorum is a fungal-like plant pathogen belonging to the Oomycota phylum. It is the causal agent of root rot on rhododendron and many other species, as well as leather rot of strawberries.
Phytophthora × cambivora is a plant pathogen that causes ink disease in European chestnut trees. Ink disease, also caused by Phytophthora cinnamomi, is thought to have been present in Europe since the 18th century, and causes chestnut trees to wilt and die; major epidemics occurred during the 19th and 20th centuries. P. cinnamomi and P. × cambivora are now present throughout Europe since the 1990s. Ink disease has resurged, often causing high mortality of trees, particularly in Portugal, Italy, and France. It has also been isolated from a number of different species since the 1990s, including:
Phytophthora citrophthora, also known as brown rot of citrus, is a soil borne oomycete that infects several economically important citrus crops. A diagnostic symptom of P. citrophthora is gummosis, wherein lesions around the base of the tree exude sap. Other common symptoms include dark longitudinal lesions forming at the soil line, a sour smell, and eventual cracking of the bark. Advanced symptoms include yellowing and necrosis of the tree canopy. Girdling action caused by the pathogen around the trunk can often cause the collapse of the tree. Resistant lemon varieties have been developed and their implementation has been effective at controlling the spread of the disease. Fruits that have been infected with P. citrophthora exhibit symptoms of brown rot characterized by a distinct odor. This disease is most active in the moderate temperatures of spring, fall, and winter months, opposite of most other Phytophthora species.
Phytophthora medicaginis is an oomycete plant pathogen that causes root rot in alfalfa and chickpea. It is a major disease of these plants and is found wherever they are grown. P. medicaginis causes failure of stand establishment because of seedling death. Phytophthora medicaginis is part of a species complex with Phytophthora megasperma.
Phytophthora nicotianae or black shank is an oomycete belonging to the order Peronosporales and family Peronosporaceae.
Phytophthora erythroseptica—also known as pink rot along with several other species of Phytophthora—is a plant pathogen. It infects potatoes causing their tubers to turn pink and damages leaves. It also infects tulips (Tulipa) damaging their leaves and shoots.
Alternaria solani is a fungal pathogen that produces a disease in tomato and potato plants called early blight. The pathogen produces distinctive "bullseye" patterned leaf spots and can also cause stem lesions and fruit rot on tomato and tuber blight on potato. Despite the name "early," foliar symptoms usually occur on older leaves. If uncontrolled, early blight can cause significant yield reductions. Primary methods of controlling this disease include preventing long periods of wetness on leaf surfaces and applying fungicides. Early blight can also be caused by Alternaria tomatophila, which is more virulent on stems and leaves of tomato plants than Alternaria solani.
Phytophthora capsici is an oomycete plant pathogen that causes blight and fruit rot of peppers and other important commercial crops. It was first described by L. Leonian at the New Mexico State University Agricultural Experiment Station in Las Cruces in 1922 on a crop of chili peppers. In 1967, a study by M. M. Satour and E. E. Butler found 45 species of cultivated plants and weeds susceptible to P. capsici In Greek, Phytophthora capsici means "plant destroyer of capsicums". P. capsici has a wide range of hosts including members of the families Solanaceae and Cucurbitaceae as well as Fabaceae.
Phytophthora kernoviae is a plant pathogen that mainly infects European beech and Rhododendron ponticum. It was first identified in 2003 in Cornwall, UK when scientists were surveying for the presence of Phytophthora ramorum. This made it the third new Phytophthora species to be found in the UK in a decade. It was named Phytophthora kernoviae after the ancient name for Cornwall, Kernow. It causes large stem lesions on beech and necrosis of stems and leaves of Rhododendron ponticum. It is self-fertile. It has also been isolated from Quercus robur and Liriodendron tulipifera. The original paper describing the species, stated it can infect Magnolia and Camellia species, Pieris formosa, Gevuina avellana, Michelia doltsopa and Quercus ilex. Since then many other plants have been identified as natural hosts of the pathogen. Molecular analysis has revealed that an infection on Pinus radiata, recorded in New Zealand in 1950, was caused by P. kernoviae. The pathogen was also noted on Drimys winteri, Gevuina avellana, Ilex aquifolium, Quercus ilex, Vaccinium myrtillus, Hedera helix, Podocarpus salignas.
Phytophthora tentaculata is a plant pathogen that causes root and stalk rot. It was first isolated in 1993 in a nursery in Germany infecting Chrysanthemum, Verbena, and Delphinium ajacis. It has since been found infecting a Verbena in Majorca, Spain in June 2001 but was thought to be restricted to nurseries in Germany and the Netherlands. Other species have since been found to be infected, Santolina chamaecyparissus in Spain in 2004, Gerbera jamesonii in Italy 2006, and Aucklandia lappa in China in 2008.
Collar rot is a symptomatically described disease that is usually caused by any one of various fungal and oomycete plant pathogens. It is present where the pathogen causes a lesion localized at or about the collet between the stem and the root. The lesions develop around the stem eventually forming a "collar". Observationally, collar rot grades into "basal stem rot", and with some pathogens is the first phase of "basal stem rot" often followed by "root rot". Collar rot is most often observed in seedings grown in infected soil. The pathogens that cause collar rot may be species or genera specific. But generalist pathogens such as Agroathelia rolfsii are known to attack over 200 different species. While bacteria caused collar rot is not common, trees infected with Fire blight may develop collar rot. Non-parasitic collar rot may be caused by winter damage.
Buckeye rot of tomato is caused by three species of pathogens in the genus Phytophthora: P. nicotianae var. parasitica, P. capsici, and P. drechsleri. It is an oomycete that thrives in warm, wet conditions and lives in the soil. It is characterized by a bull’s eye pattern of dark brown rotting on the tomato fruit, and affects fruit that is close to, or lying on the soil. The easiest management is to keep the plant out of contact with the soil, although other chemical methods can be very effective. This disease commonly occurs in the southeast and south central areas of the United States. The disease has affected a large portion of crop yield in the United States as well as India. The relatively small genome size of Phytophthora parasitica compared to Phytophthora infestans gives researchers the unique ability to further examine its ability to cause disease.
Phytophthora hydropathica is an oomycete plant pathogen that is found in aquatic environments such as irrigation and river water. The pathogen was previously classified as P. drechsleri Dre II before being categorized as its own distinct species. P. hydropathica has been primarily found in association with ornamental plant nurseries. The pathogen has been isolated throughout the Southern United States, as well as internationally in Mexico, Italy, and Spain.
