Names | |
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IUPAC name 1-Heptyl-3-hydroxy-9-methoxy-7-methyl-6-oxobenzo[b][1,4]benzodioxepine-2-carboxylic acid | |
Other names Grayanic acid | |
Identifiers | |
3D model (JSmol) | |
ChemSpider | |
PubChem CID | |
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Properties | |
C23H26O7 | |
Molar mass | 414.454 g·mol−1 |
Appearance | colourless needles |
Melting point | 186–189 °C (367–372 °F; 459–462 K) |
Except where otherwise noted, data are given for materials in their standard state (at 25 °C [77 °F], 100 kPa). |
Grayanic acid is an organic compound found in certain lichens, particularly Cladonia grayi , where it serves as a secondary metabolite with notable taxonomic importance. Identified in the 1930s, it is now recognised as a chemotaxonomic marker that helps distinguish closely related species within the Cladonia chlorophaea species group. Grayanic acid crystallises as colourless, needle-like structures, melts at approximately 186–189 °C (367–372 °F), and displays distinctive fluorescence under ultraviolet light, aiding in its detection and study.
Chemically, grayanic acid is a depsidone, featuring two aromatic rings linked by ester and ether bonds. Its biosynthesis occurs in the fungal partner of the lichen and does not require the presence of the algal symbiont. Genetic research has identified a key biosynthetic gene cluster responsible for its formation, highlighting biochemical pathways and enzymes that convert precursor compounds into grayanic acid and related metabolites such as sphaerophorin.
Beyond its chemical characteristics, grayanic acid has proven invaluable in refining lichen taxonomy, as variations in its presence and concentration underpin subtle species distinctions. By comparing grayanic acid profiles across different populations and geographic regions, researchers have gained insights into evolutionary relationships, species distribution patterns, and the ecological roles that these fungal–algal partnerships play in diverse environments.
Grayanic acid was first isolated in the 1930s by Yasuhiko Asahina and Zyozi Simosato from the lichen species Cladonia grayi . In their initial study, they determined it to be a crystalline acid with a melting point of 185 °C and proposed a molecular formula of C21H24O7. However, further investigation was limited at the time due to a shortage of material. [1]
By 1943, Alexander W. Evans highlighted the utility of Asahina's microchemical methods, including microcrystallisation, in identifying grayanic acid. Evans described its needle-like crystals, which often formed radiating clusters under specific conditions, and noted a melting point near 185 °C (365 °F), consistent with Asahina's findings. [2]
In 1963, Shoji Shibata and Hsiich-Ching Chiang revised the molecular formula to C23H26O7 and refined the melting point to 186–189 °C, aligning it with subsequent modern analyses. [3] Their work also supported Asahina's classification of the Cladonia chlorophaea complex into distinct species based on chemical markers, such as grayanic acid, cryptochlorophaeic acid, and merochlorophaeic acid. However, Elke Mackenzie suggested that such differences were better explained as chemical strains (chemotypes) within a single species. [4] [5] Later synthetic studies in 1976 determined a slightly lower range of 181.5–182.5 °C for synthetic grayanic acid, highlighting minor variations attributable to synthetic purity. [6]
The molecular structure of grayanic acid consists of a depside skeleton with two benzene rings connected by both ester (-CO-O-) and ether (-O-) linkages, forming a depsidone. The molecule contains one methoxy group (H3CO-), one free hydroxyl group (-OH), and a chelated carboxyl group (-COOH). Nuclear magnetic resonance studies revealed the presence of alkyl side chains, specifically determined to be either (1) CH3 and C7H15 or (2) C2H5 and C6H13. [3] The complete systematic name for the compound is 6-heptyl-8-hydroxy-3-methoxy-1-methyl-11-oxo-11H-dibenzo[b,e][1,4]dioxepin-7-carboxylic acid. [6]
While the initial structural assignment was based primarily on spectroscopic evidence, some uncertainty remained regarding the precise positions of the alkyl groups. This ambiguity was definitively resolved through total synthesis in 1976, which confirmed the original structural proposal. The compound's structure is notably similar to sphaerophorin, another lichen metabolite found in the genus Sphaerophorus . [6]
Grayanic acid forms radiating clusters of colourless needles upon crystallisation, and has a melting point of 186–189°C. [7] It dissolves readily in ethyl acetate, methyl acetate, ethanol, and chloroform, is sparingly solubility in benzene, and is insoluble in hexane and petroleum ether. These solubility characteristics facilitate its extraction and crystallisation from lichen material. [3] Synthetic material provided a more precise melting point, measured at 181.5–182.5°C. [6]
Nuclear magnetic resonance spectroscopy identifies signals at δ 0.89 (deformed triplet, methyl), 1.26 (broad signal, five methylene groups), 2.50 (singlet, methyl), 3.24 (broad signal, ArCH₂), 3.83 (singlet, methoxy), and 6.62–6.72 (aromatic protons). [6] Mass spectrometry detects a molecular ion peak at m/z 414 (M+, C23H26O7), with characteristic fragmentation patterns including peaks at m/z 396 (M+-H₂O), 370 (M+-CO₂), and 165 (A-ring fragment). High-resolution mass spectrometry verifies the molecular formula, providing an exact 414.1679. [8] The compound has identical Rf values across multiple solvent systems when compared with authentic natural samples. [6]
The compound fluoresces blue under ultraviolet light, a distinctive property. This fluorescence aids in studying its accumulation in laboratory cultures of the fungal partner. When the fungus is grown in culture, grayanic acid forms visible extracellular deposits on aerial fungal filaments (hyphae). These deposits appear as patches or bands along the hyphae, accumulating more densely in older regions farther from the growing tips. The deposits dissolve readily in acetone or methanol, leaving only the fungal cell walls' natural fluorescence. [9]
The chemical behaviour of grayanic acid includes several distinctive reactions and spectroscopic characteristics. In ethanolic solution, it forms a violet colour with 1% ferric chloride, and a pale yellow colour with diazonium reagent. [3] Its ultraviolet absorption spectrum shows two peaks (λmax): one at 258 nm (log ε 4.10), and another at 300–310 nm (log ε of 3.5). [7] Infrared spectroscopy identifies structural features such as a chelated carboxyl group at 1650 cm⁻¹, a lactonic linkage at 1750 cm⁻¹, and benzenoid rings with bands at 1570 and 1610 cm⁻¹. The compound remains stable under methanolysis, showing no changes after boiling in methanol for 18 hours. [3]
Nuclear magnetic resonance studies of grayanic acid in chloroform show proton signals at τ = 9.10 (terminal methyl groups of long alkyl chains), τ = 8.63 (intermediate methylenes), and τ = 6.75 (end methylenes attached to the benzene ring). These signals, compared with those of similar compounds, helped identify the positions of functional groups in the molecule. In acetone, benzene ring protons exhibit chemical shifts at 6.13, 6.66, and 6.80 ppm, matching the pattern of related compounds like sphaerophorin. [3]
Thin-layer chromatography shows grayanic acid as a UV+ pale blue spot before heating, which becomes pale pinkish-brown with a UV+ purple hue after acid spray and heating. This chromatographic behaviour aids in identifying grayanic acid in complex lichen extracts, especially in chemotaxonomic studies distinguishing species like Neophyllis melacarpa and N. pachyphylla by their metabolite profiles. [10]
Grayanic acid displays characteristic behaviour in solvents and chemical tests. During bicarbonate solution tests, it forms an oily layer between ether and aqueous phases, in addition to its standard solubility properties. It fluoresces green when treated with potassium hydroxide and chloral hydrate but gives a negative result in the homofluorescein reaction. These chemical properties helped classify grayanic acid as an orcinol-type depsidone rather than a simple depside. [3]
Grayanic acid undergoes chemical transformations that aid in understanding its structure and reactivity. It readily forms a mono-acetate derivative (melting point 155–157°C) and can be converted to a methyl ether methyl ester (melting point 88–90°C). [3] Acetylgrayanic acid is prepared by treating grayanic acid with acetic anhydride and sulfuric acid. The resulting crystals melt at 57–59°C after recrystallisation from benzene and n-hexane. [7]
Under ice-cooling, potassium hydroxide converts grayanic acid into grayanoldicarboxylic acid, while barium hydroxide treatment yields grayanolic acid. These reactions illustrate the compound's reactivity with bases and its capacity to form structurally distinct derivatives. [3]
Grayanic acid also shows characteristic solubility behaviour in chemical tests. For example, when shaken with aqueous sodium bicarbonate, it forms an oily layer between the ethereal and aqueous phases, a property that facilitates its separation during analysis. [3]
Grayanic acid was first discovered and isolated from Cladonia grayi. Initial extractions yielded about 0.7% grayanic acid from raw lichen material, producing 350 milligrams of pure crystals from 50 grams of lichen. Ethanol and chloroform facilitated this yield, aiding the purification process. [3]
Although initially identified only in C. grayi, later research detected grayanic acid in other Cladonia species. One example is Cladonia anitae , an endemic species discovered in 1982 along the Atlantic Coast of southeastern North Carolina. In this species, grayanic acid is a major metabolite, found with usnic acid and rhodocladonic acid. [11] Grayanic acid is also a major secondary metabolite in Jarmania tristis , a byssoid lichen endemic to Tasmania's cool temperate rainforests. In J. tristis, it co-occurs with usnic acid and 4-O-demethylgrayanic acid, shaping the species' distinctive chemistry. [12]
Grayanic acid production varies geographically among C. grayi populations. Caribbean specimens exhibit chemical variants, with some populations producing grayanic acid alongside related compounds like stenosporonic and divaronic acids. This variation appears geographically influenced, with West Indian specimens showing different proportions of these compounds compared to North American ones. For example, Jamaican specimens typically contain grayanic acid and stenosporonic acid as major constituents, while other populations often produce grayanic acid alone. [8]
Laboratory cultivation has revealed the conditions required for grayanic acid production by the fungal partner (mycobiont) of C. grayi. Isolated from its algal partner, the fungus produces substantial grayanic acid, particularly on solid media under dry conditions. Production starts days after transferring the fungus from liquid to solid growth medium and increases as aerial fungal filaments develop. Under optimal conditions, the cultured fungus can achieve production rates comparable to those of some non-lichen fungi producing similar compounds. The fungus's ability to synthesise grayanic acid in pure culture shows that the compound, while characteristic of the intact lichen, does not require the algal partner. [9]
Grayanic acid is integral to lichen taxonomy, particularly for distinguishing species in the Cladonia chlorophaea complex. Initially used with taste tests to separate species, detailed studies in the 1970s revealed more nuanced relationships between chemical composition and morphology. [13]
Studies of North Carolina populations showed a correlation between grayanic acid and specific morphological traits. C. grayi, which contains grayanic acid, consistently exhibits smaller granules (soredia) in its podetial cups than C. cryptochlorophaea. These differences, unaffected by fumarprotocetraric acid content, indicate grayanic acid's taxonomic relevance. [13] Similarly, in the Australasian genus Neophyllis, grayanic acid is a key chemotaxonomic marker distinguishing N. melacarpa from N. pachyphylla. N. melacarpa consistently produces grayanic acid with melacarpic acid and sometimes fumarprotocetraric acid, whereas N. pachyphylla contains only melacarpic acid. These chemical distinctions help resolve taxonomic ambiguities between the two species. [10]
Taxonomic interpretations of chemical variation in these lichens have changed over time. Early classifications focused on the presence or absence of fumarprotocetraric acid (a bitter compound), but later studies suggested this variation reflects different genotypes of the same species rather than separate species. This pattern mirrors chemical variation seen in other lichens, such as the Cetraria islandica complex. [13]
North American distribution studies reveal that specimens with both grayanic acid and fumarprotocetraric acid are more common in mountainous regions, while coastal populations primarily contain grayanic acid alone. Despite these chemical differences, the variants seem to belong to the same species, sharing consistent morphology aside from fumarprotocetraric acid presence. [13]
The first total synthesis of grayanic acid was accomplished by Peter Djura and Melvyn Sargent in 1976 at the University of Western Australia. The key step in their synthetic route was an Ullmann reaction to construct the diaryl ether linkage. Their successful synthesis not only provided access to the compound but also definitively confirmed its structural assignment. [6]
The synthetic pathway proceeded through several key intermediates. Initially, the researchers constructed the two aromatic rings separately. The first ring component was prepared from methyl acetoacetate and (E)-methyl dec-2-enoate through a series of transformations. The second ring was synthesised starting from a benzyl-protected hydroxybenzoate. [6]
The crucial Ullmann coupling reaction joined these two components with a 73% yield, forming the diaryl ether intermediate. Following this step, hydrogenolysis produced a hydroxy acid which was then converted to methyl O-methylgrayanate through lactonisation with trifluoroacetic anhydride. The final stages of the synthesis involved careful manipulation of protecting groups to yield grayanic acid, which was identical in all respects to the natural product isolated from lichens. [6]
The biosynthesis of grayanic acid involves fungal polyketide synthases and subsequent modifications, following a pathway similar to other lichen depsidones. Grayanic acid shares biosynthetic origins with sphaerophorin, a known lichen depside. Structural similarities and chemical transformation studies led Shibata and Chiang to propose sphaerophorin as a biosynthetic precursor to grayanic acid. The relationship is supported by shared structural features, such as similar methoxy and hydroxyl group arrangements on their benzenoid rings. [3]
These foundational insights have been refined through genetic and biochemical studies. A 1985 study showed that grayanic acid biosynthesis depends entirely on the fungal genetics of C. grayi. Resynthesised lichens, formed by pairing fungal spores from grayanic acid-producing chemotypes with algal symbionts from unrelated lichens, consistently produced grayanic acid. This finding confirmed that the algal partner does not influence the chemotype, establishing the fungal component as the sole regulator of secondary metabolite production. [14]
A 1992 study demonstrated that the fungal partner (mycobiont) of Cladonia grayi produces grayanic acid independently of its algal partner. Biosynthesis was linked to the development of aerial hyphae—thread-like fungal filaments that develop blue-fluorescent patches of grayanic acid under ultraviolet light. Production increased significantly under conditions of water stress and air exposure. [9]
Genetic studies have elucidated the molecular mechanisms of grayanic acid biosynthesis. A biosynthetic gene cluster in C. grayi, including CgrPKS16 (a polyketide synthase that assembles the depside precursor 4-O-demethylsphaerophorin), drives the process. The pathway includes CYP682BG1, a cytochrome P450 monooxygenase for oxidative coupling, and an O-methyltransferase that adds a methyl group to complete the synthesis. [15] [16]
Grayanic acid belongs to a broader family of orcinol-type depsidones produced by lichens in the Cladonia chlorophaea group. These compounds form via biosequential patterns, with simpler depsides converting into more complex depsidones. This dynamic biosynthetic network produces related compounds, such as stenosporonic and divaronic acids, which exhibit variations in their carbon side-chain lengths across populations. This variation highlights the ecological and taxonomic relevance of grayanic acid in lichen communities. [8]
The biosynthetic process shows distinct patterns during laboratory cultivation. Under suitable growing conditions, fungi first produce simpler depsides like 4-O-demethylsphaerophorin, followed by more complex depsidones like grayanic acid. This sequential process reflects the gene-driven enzymatic pathway and demonstrates the metabolic flexibility of lichen fungi. [9]
Grayanic acid shares key structural features with sphaerophorin, a depside found in Sphaerophorus lichens. Cryptochlorophaeic acid and merochlorophaeic acid, structurally related to grayanic acid, were first identified in the Cladonia chlorophaea complex. These compounds, described in detail by Shibata and Chiang, share structural similarities with grayanic acid, including benzenoid and ester group arrangements. [17]
In 1985, two additional related depsidones were reported: stenosporonic acid (C23H26O7) and divaronic acid (C21H22O7). These compounds are lower homologs in the same chemical series as grayanic acid, sharing its basic structure but differing in carbon side-chain lengths. Both compounds were first identified in Caribbean populations of C. grayi, where they occur alongside grayanic acid in varying proportions. Mass spectrometry confirmed their structures, with stenosporonic acid displaying a characteristic molecular ion at m/z (mass-to-charge ratio) 414 and divaronic acid at m/z 386. [8]
Discovered in 1982, 4-O-demethylgrayanic acid (C22H24O7) naturally co-occurs with grayanic acid in several lichen species. This compound is present in all studied grayanic acid-producing lichens, including Cladonia and Gymnoderma melacarpum . Congrayanic acid, another related compound, may result from the nonenzymatic hydrolysis of grayanic acid, though it usually appears in trace amounts and is challenging to detect in unmanipulated extracts. [11]
In 1980, congrayanic acid (C23H28O8) was first synthesised by treating grayanic acid with aqueous sodium hydroxide, cleaving the ester linkage. It crystallises as colorless prisms with a melting point of 183–183.5°C. This process confirmed structural aspects of grayanic acid, as congrayanic acid retained key spectroscopic features of the parent compound. [18]
Researchers have prepared several derivatives of grayanic acid, including:
Grayanic acid belongs to the broader depsidone class, presumably formed through the oxidative cyclisation of p-depsides. This relationship is supported by the occasional, though rare, co-occurrence of depside-depsidone pairs in lichens. [6]
The Sphaerophoraceae are a family of lichen-forming fungi in the order Lecanorales. Species of this family have a widespread distribution, especially in southern temperate regions, with particular diversity in cool temperate rainforests and highly oceanic areas of both hemispheres.
A depside is a type of polyphenolic compound composed of two or more monocyclic aromatic units linked by an ester group. Depsides are most often found in lichens, but have also been isolated from higher plants, including species of the Ericaceae, Lamiaceae, Papaveraceae and Myrtaceae.
Cladonia asahinae, the pixie cup lichen or Asahina's cup lichen, is a species of cup lichen in the family Cladoniaceae. C. asahinae occurs in Europe, North America, southern South America, and the Antarctic. It typically grows in high moisture environments in soil rich in humus or on dead wood.
Cetrelia is a genus of leafy lichens in the large family Parmeliaceae. They are commonly known as sea-storm lichens, alluding to the wavy appearance of their lobes. The name of the genus, circumscribed in 1968 by the husband and wife lichenologists William and Chicita Culberson, alludes to the former placement of these species in the genera Cetraria and Parmelia.
Chicita Frances Culberson was an American lichenologist.
A spot test in lichenology is a spot analysis used to help identify lichens. It is performed by placing a drop of a chemical reagent on different parts of the lichen and noting the colour change associated with application of the chemical. The tests are routinely encountered in dichotomous keys for lichen species, and they take advantage of the wide array of lichen products produced by lichens and their uniqueness among taxa. As such, spot tests reveal the presence or absence of chemicals in various parts of a lichen. They were first proposed as a method to help identify species by the Finnish lichenologist William Nylander in 1866.
Depsidones are chemical compounds that are sometimes found as secondary metabolites in lichens. They are esters that are both depsides and cyclic ethers. An example is norstictic acid.
Vermilacinia cephalota is a fruticose lichen usually found on trees, shrubs and wooden fences in the fog regions along the Pacific Coast of North America from southeastern Alaska to the Vizcaíno Peninsula of Baja California.
Yasuhiko Asahina was a Japanese chemist and lichenologist.
Salazinic acid is a depsidone with a lactone ring. It is found in some lichens, and is especially prevalent in Parmotrema and Bulbothrix, where its presence or absence is often used to help classify species in those genera.
Lichexanthone is an organic compound in the structural class of chemicals known as xanthones. Lichexanthone was first isolated and identified by Japanese chemists from a species of leafy lichen in the 1940s. The compound is known to occur in many lichens, and it is important in the taxonomy of species in several genera, such as Pertusaria and Pyxine. More than a dozen lichen species have a variation of the word lichexanthone incorporated as part of their binomial name. The presence of lichexanthone in lichens causes them to fluoresce a greenish-yellow colour under long-wavelength UV light; this feature is used to help identify some species. Lichexanthone is also found in several plants, and some species of fungi that do not form lichens.
Lichen products, also known as lichen substances, are organic compounds produced by a lichen. Specifically, they are secondary metabolites. Lichen products are represented in several different chemical classes, including terpenoids, orcinol derivatives, chromones, xanthones, depsides, and depsidones. Over 800 lichen products of known chemical structure have been reported in the scientific literature, and most of these compounds are exclusively found in lichens. Examples of lichen products include usnic acid, atranorin, lichexanthone, salazinic acid, and isolichenan, an α-glucan. Many lichen products have biological activity, and research into these effects is ongoing.
Sekikaic acid is an organic compound in the structural class of chemicals known as depsides. It is found in some lichens. First isolated from Ramalina sekika, it is a fairly common lichen product in Ramalina and Cladonia, both genera of lichen-forming fungi. The species epithet of the powdery lichen Lepraria sekikaica refers to the presence of this substance—a rarity in genus Lepraria.
Barbatic acid is an organic compound that is made by some lichens. It is in the structural class known as depsides. It is particularly common in the genera Usnea and Cladonia.
Platismatia glauca is a common and widespread species of corticolous (bark-dwelling), foliose lichen in the family Parmeliaceae.
Succinprotocetraric acid is an organic chemical compound with the formula C22H18O12. It is the ester of succinic acid and protocetraric acid and it is classified as a depsidone.
Fallacinol (teloschistin) is an organic compound in the structural class of chemicals known as anthraquinones. It is found in some lichens, particularly in the family Teloschistaceae, as well as a couple of plants and non lichen-forming fungi. In 1936, Japanese chemists isolated a pigment named fallacin from the lichen Oxneria fallax, which was later refined and assigned a tentative structural formula; by 1949, Indian chemists had isolated a substance from Teloschistes flavicans with an identical structural formula to fallacin. Later research further separated fallacin into two distinct pigments, fallacin-A and fallacin-B (fallacinol). The latter compound is also known as teloschistin due to its structural match with the substance isolated earlier.
Connorstictic acid is an organic compound in the structural class of chemicals known as depsidones. It occurs as a secondary metabolite in many lichen species in several genera.
Confluentic acid is an organic compound belonging to the chemical class known as depsides. It serves as a secondary metabolite in certain lichens and plays a role in distinguishing closely related species within the genus Porpidia. In 1899, Friedrich Wilhelm Zopf isolated a compound from Lecidea confluens, which he initially named confluentin and noted for its melting point of 147–148 °C. This substance demonstrated the ability to turn litmus paper red and, when interacting with alkali, decomposed into carbon dioxide and phenol-like compounds. Zopf subsequently revised the chemical formula and melting point of the compound. Siegfried Huneck renamed it confluentinic acid in 1962, characterising it as optically inactive, with distinct colour reactions and solubility properties, and determined its molecular formula as C28H36O8.
Cladonia grayi, commonly known as Gray's cup lichen or Gray's pixie cup, is a species of fruticose lichen in the family Cladoniaceae. It is characterised by small, leaf-like squamules forming its primary thallus and distinctive upright podetia that develop into goblet-shaped cups. The species contains several unique lichen substances, primarily grayanic acid, which causes it to glow light blue under ultraviolet light, and has also been found to produce protective pyrrolopyrazine compounds. Its photobiont is the green algal species Asterochloris glomerata.