Eurotiomycetes is a large class of ascomycetes with cleistothecial ascocarps within the subphylum Pezizomycotina, currently containing around 3810 species according to the Catalogue of Life. It is the third largest lichenized class, with more than 1200 lichen species that are mostly bitunicate in the formation of asci. It contains most of the fungi previously known morphologically as "Plectomycetes".
The Hypocreales are an order of fungi within the class Sordariomycetes. In 2008, it was estimated that it contained some 237 genera, and 2647 species in seven families. Since then, a considerable number of further taxa have been identified, including an additional family, the Stachybotryaceae. Wijayawardene et al. in 2020 added more families and genera to the order. According to the Catalog of Life, As of April 2021 the Hypocreales contains 6 families, 137 genera, and 1411 species. Hyde et al. (2020a) listed 14 families under Hypocreales, while, Wijayawardene et al. (2022) accepted 15 families in the order, where Cylindriaceae was additionally added. Earlier, Hyde et al. (2020a) had placed Cylindriaceae in class Xylariomycetidae. Samarakoon et al. (2022) agreed. Hence, Cylindriaceae should have been excluded from Hypocreales and placed in Xylariomycetidae. Xiao et al. (2022) recently introduced a new family Polycephalomycetaceae to Hypocreales.
Blastocladiomycota is one of the currently recognized phyla within the kingdom Fungi. Blastocladiomycota was originally the order Blastocladiales within the phylum Chytridiomycota until molecular and zoospore ultrastructural characters were used to demonstrate it was not monophyletic with Chytridiomycota. The order was first erected by Petersen for a single genus, Blastocladia, which was originally considered a member of the oomycetes. Accordingly, members of Blastocladiomycota are often referred to colloquially as "chytrids." However, some feel "chytrid" should refer only to members of Chytridiomycota. Thus, members of Blastocladiomycota are commonly called "blastoclads" by mycologists. Alternatively, members of Blastocladiomycota, Chytridiomycota, and Neocallimastigomycota lumped together as the zoosporic true fungi. Blastocladiomycota contains 5 families and approximately 12 genera. This early diverging branch of kingdom Fungi is the first to exhibit alternation of generations. As well, two (once) popular model organisms—Allomyces macrogynus and Blastocladiella emersonii—belong to this phylum.
Pleosporaceae is a family of sac fungi. They are pathogenic to humans or saprobic on woody and dead herbaceous stems or leaves.
Chrysotrichaceae is a family of lichenized fungi in the order Arthoniales. Member of this family have a widespread distribution, but are especially prevalent in tropical areas. "Chrysothrichaceae" and "Chrysothricaceae" are alternative spellings that have been used in some older publications; the latter was used by Alexander Zahlbruckner in the protologue publication. Both of these spellings are considered incorrect, and the current spelling has been formalised following a proposal for conservation of Chrysotrichaceae against Pulverariaceae.
The Zoopagomycotina are a subdivision of the fungal division Zygomycota sensu lato. It contains 5 families and 20 genera. Relationships among and within subphyla of Zygomycota are poorly understood, and their monophyly remains in question, so they are sometimes referred to by the informal name zygomycetes.
The Harpellales are an order of fungi classified in the subdivision Kickxellomycotina. Thalli are either unbranched or branched, producing basipetal series of trichospores. Zygospores are biconical. Species in the order are found attached to the gut lining of aquatic larvae of Insecta or (rarely) Isopoda. Harpellales are divided into two families, the Harpellaceae and the Legeriomycetaceae. According to the Dictionary of the Fungi, the order contains 38 genera and 200 species. The order was formally described in 1978 Mycotaxon publication. Harpellales has served as a model to study and understand the evolution, growth, and biodiversity of other such fungi found in the gut as species are plentiful around the world.
Dimargaritales is a monotypic order of fungi in the monotypic Dimargaritomycetes class within the subdivision of Kickxellomycotina.
Ichthyophonida is an order of parasitic eukaryote, especially in the parasitizing of animals.
The Microascales are an order of fungi in the class Sordariomycetes, subclass Hypocreomycetidae. This is a relatively small order of mostly saprobic fungi that live in soil, rotting vegetation and dung. Some species are plant pathogens, such as Ceratocystis fimbriata, transmitted by beetles to living trees and causing cacao wilt and many other economically important diseases. Species in the genus Pseudallescheria are pathogenic to humans The order was circumscribed in 1980. Wijayawardene et al. in 2020 added more families and genera to the order.
The Bionectriaceae are a family of fungi in the order Hypocreales. A 2008 estimate places 35 genera and 281 species in the family. Species in the family tend to grow on plant material, including woody debris, while some species associate with algae, bryophytes, or other fungi.
The Trichosphaeriales are an order of sac fungi. It is monotypic, and consists of the single family, the Trichosphaeriaceae. In 2017, the family of Trichosphaeriaceae was placed in Diaporthomycetidae families incertae sedis, which was accepted by Wijayawardene et al. (2018), and Wijayawardene et al. 2020. The order of Trichosphaeriales was also unplaced. They are generally saprobic and pathogenic on plants, commonly isolated from herbivore dung.
Robert W. Lichtwardt was a Brazilian-born American mycologist specializing in the study of arthropod-associated, gut-dwelling fungi (trichomycetes). He is known for his online monograph and interactive keys to trichomycete taxa.
Cladochytriales is an order of chytrid fungi. It is the only order in the monotypic class Cladochytriomycetes. The order was described in 2009 to accommodate a monophyletic clade containing many genera of chytrid fungi often observed growing over decaying plant tissue and other cellulosic substrates from aquatic habitats and humid soils.
Paramoebidium is a genus of unicellular, symbiotic eukaryotes that inhabit the digestive tract of immature freshwater arthropod hosts. Paramoebidium is classified in the opisthokont class Mesomycetozoea, and is the sole genus in the family Paramoebidiidae. Prior to 2005, Paramoebidium species were tentatively placed with the fungal group Trichomycetes due to their habitation of arthropod guts, host overlap between various Paramoebidium and fungal trichomycete taxa, and similar vegetative growth form.
Backusella is the sole genus of zygote fungi in the family Backusellaceae, which is classified in the order Mucorales. Members of this genus have been often isolated from plant litter, from locations around the world.
Saccharomyceta is a clade of fungi containing Pezizomycotina and Saccharomycotina, or all Ascomycete fungi except Taphrinomycotina according to the 2007 fungal phylogeny "The Mycota: A Comprehensive Treatise on Fungi as Experimental Systems for Basic and Applied Research" and Tedersoo et al. 2018.
Calcarisporiellaceae is a family of fungi within the subkingdom Mucoromycota. It is the only family in the order Calcarisporiellales, class Calcarisporiellomycetes, subphylum Calcarisporiellomycotina and phylum Calcarisporiellomycota. It contains two known genera, Calcarisporiella and Echinochlamydosporium. The two genera each have one species.
In mycology, a dark taxon is a taxon that does not appear to produce any observable morphological structure and that appears impossible to cultivate in laboratory conditions. Dark taxa are chiefly detected by DNA sequencing, and in particular environmental metabarcoding.
