The salt marsh harvest mouse, also known as the red-bellied harvest mouse, is an endangered rodent endemic to the San Francisco Bay Area salt marshes in California. The two distinct subspecies are both endangered and listed together on federal and state endangered-species lists. The northern subspecies is lighter in color and inhabits the northern marshes of the bay, and the southern subspecies lives in the East and South Bay marshes. They are both quite similar in appearance to their congener species, the Western harvest mouse, R. megalotis, to which they are not closely related. Genetic studies of the northern subspecies have revealed that the salt marsh harvest mouse is most closely related to the plains harvest mouse, R. montanus, which occurs now in the Midwest. Its endangered designation is due to its limited range, historic decline in population and continuing threat of habitat loss due to development encroachment at the perimeter of San Francisco Bay.
Sporobolus alterniflorus, or synonymously known as Spartina alterniflora, the smooth cordgrass, saltmarsh cordgrass, or salt-water cordgrass, is a perennial deciduous grass which is found in intertidal wetlands, especially estuarine salt marshes. It has been reclassified as Sporobolus alterniflorus after a taxonomic revision in 2014, but it is still common to see Spartina alterniflora and in 2019 an interdisciplinary team of experts coauthored a report published in the journal Ecology supporting Spartina as a genus. It grows 1–1.5 m tall and has smooth, hollow stems that bear leaves up to 20–60 cm long and 1.5 cm wide at their base, which are sharply tapered and bend down at their tips. Like its relative saltmeadow cordgrass S. patens, it produces flowers and seeds on only one side of the stalk. The flowers are a yellowish-green, turning brown by the winter. It has rhizoidal roots, which, when broken off, can result in vegetative asexual growth. The roots are an important food resource for snow geese. It can grow in low marsh as well as high marsh, but it is usually restricted to low marsh because it is outcompeted by salt meadow cordgrass in the high marsh. It grows in a wide range of salinities, from about 5 psu to marine, and has been described as the "single most important marsh plant species in the estuary" of Chesapeake Bay. It is described as intolerant of shade.
Located in northern California, the Suisun Marsh has been referred to as the largest brackish water marsh on west coast of the United States of America. The marsh land is part of the San Francisco Bay tidal estuary, and subject to tidal ebb and flood. The marsh is home to many species of birds and other wildlife, and is formed by the confluence of the Sacramento and San Joaquin rivers between Martinez and Suisun City, California and several other smaller, local watersheds. Adjacent to Suisun Bay, the marsh is immediately west of the legally defined Sacramento-San Joaquin Delta as well as part of the San Francisco Bay estuary.
Ridgway's rail is a near-threatened species of bird. It is found principally in California's San Francisco Bay to southern Baja California. A member of the rail family, Rallidae, it is a chicken-sized bird that rarely flies.
Sorex ornatus sinuosus, the Suisun shrew or Suisun ornate shrew, is a subspecies of the ornate shrew that occurs in the tidal marshes of the northern shores of San Pablo and Suisun bays. Brown and Rudd redefined the western boundary of the range from a prior designation of the Petaluma River. The Suisun shrew has been designated as a Species of Concern by the U.S. government and a Mammalian Species of Special Concern by the state of California.
The Seal Beach National Wildlife Refuge is a wildlife refuge encompassing 965 acres (3.91 km2) located in the California coastal community of Seal Beach. Although it is located in Orange County it is included as part of the San Diego National Wildlife Refuge Complex. It was established in 1972.
Lilium pardalinum subsp. pitkinense, the Pitkin Marsh lily, is an endangered perennial herb of the family Liliaceae that is endemic to certain wetland areas in the northern California Coast Ranges of Sonoma County, California, United States. It is a subspecies of Lilium pardalinum.
Arctostaphylos pajaroensis is a species of manzanita known by the common name Pajaro manzanita. It is endemic to California, where it is known mainly from Monterey County.
Astragalus pycnostachyus is a species of milkvetch known by the common name marsh milkvetch. It is endemic to the coastline of California, where it grows in wet saline habitat such as marshes.
Atriplex tularensis is an extremely rare species of saltbush known by the common names Bakersfield smallscale, Tulare saltbush, and Tulare orach.
Chloropyron molle is a species of flowering plant in the family Orobanchaceae.
Frankenia palmeri is a species of flowering plant in the frankenia family, Frankeniaceae, known by the common name Palmer's seaheath, Palmer's frankenia, or yerba reuma. It is native to the coastline of northwestern Mexico, as well as San Diego County, California, in the United States. It is a plant of sand dunes, beaches, alkali flats, and salt marshes, where it thrives due to its adaptation to saline soils. This is a small, tangling shrub less than a meter tall with spreading stems lined with clusters of knobby, fleshy leaves. Toward the ends of branches flowers appear among the leaf clusters. Each flower has white petals 3 or 4 millimeters long, often washed with pink toward the throat and with pink anthers. The plant is becoming increasingly rare as its habitat on valuable coastal land is consumed for development.
Fremontodendron mexicanum is a rare species of shrub in the mallow family known by the common names Mexican flannelbush, Mexican fremontia, and Southern flannelbush, that is endemic to the central Peninsular Ranges in Mexico and the United States.
Acmispon prostratus, synonyms Lotus nuttallianus and Syrmatium prostratum, is a species of legume native to California and northwestern Mexico. It is known by the common names beach lotus, Nuttall's lotus, and wire bird's-foot trefoil. It is native to Baja California and just into San Diego County, California, where it is a resident of coastal habitats, such as beaches and bluffs.
Polygonum marinense is a rare North American species of flowering plants in the buckwheat family known by the common name Marin knotweed. It is endemic to California, where it is known from just a few locations north and east of San Francisco Bay.
Salvia munzii is a semi-evergreen perennial species of sage known by the common name Munz's sage or San Miguel Mountain sage. It is native to northern Baja California, Mexico, and it can be found in a few locations just north of the border in San Diego County, California, where it is particularly rare. It is characterized by small leaves and clear blue flowers. It is a member of the coastal sage scrub and chaparral plant communities.
Spartina densiflora is a species of grass known by the common name denseflower cordgrass. It has been reclassified as Sporobolus montevidensis after a taxonomic revision in 2014, but Spartina densiflora is still in common usage. It is native to the coastline of southern South America, where it is a resident of salt marshes. It is also known on the west coast of the North America and parts of the Mediterranean coast as an introduced species and in some areas a noxious weed. In California it is a troublesome invasive species of marshes in San Francisco Bay and in Humboldt Bay, where it was introduced during the 19th century from Chile in ballast.
Suaeda californica is a rare species of flowering plant in the amaranth family known by the common name California seablite. It is now endemic to San Luis Obispo County, California, where it is known from a few occurrences in the marshes around Morro Bay, historical populations around San Francisco Bay have been extirpated.
Spartina patens, the saltmeadow cordgrass, also known as salt hay, is a species of cordgrass native to the Atlantic coast of the Americas, from Newfoundland south along the eastern United States to the Caribbean and northeast Mexico. It has been reclassified as Sporobolus pumilus after a taxonomic revision in 2014, but Spartina patens is still in common usage. It can be found in marshlands in other areas of the world as an introduced species and often a harmful noxious weed or invasive species.
Lilaeopsis schaffneriana is a rare species of flowering plant in the family Apiaceae known by the common names Schaffner's grasswort and cienega false rush.
