Listeria is a genus of bacteria that acts as an intracellular parasite in mammals. By 2024, 28 species had been identified. The genus is named in honour of the British pioneer of sterile surgery Joseph Lister. Listeria species are Gram-positive, rod-shaped, and facultatively anaerobic, and do not produce endospores.
Acidithiobacillus is a genus of the Acidithiobacillia in the phylum "Pseudomonadota". This genus includes ten species of acidophilic microorganisms capable of sulfur and/or iron oxidation: Acidithiobacillus albertensis, Acidithiobacillus caldus, Acidithiobacillus cuprithermicus, Acidithiobacillus ferrianus, Acidithiobacillus ferridurans, Acidithiobacillus ferriphilus, Acidithiobacillus ferrivorans, Acidithiobacillus ferrooxidans, Acidithiobacillus sulfuriphilus, and Acidithiobacillus thiooxidans.A. ferooxidans is the most widely studied of the genus, but A. caldus and A. thiooxidans are also significant in research. Like all "Pseudomonadota", Acidithiobacillus spp. are Gram-negative and non-spore forming. They also play a significant role in the generation of acid mine drainage; a major global environmental challenge within the mining industry. Some species of Acidithiobacillus are utilized in bioleaching and biomining. A portion of the genes that support the survival of these bacteria in acidic environments are presumed to have been obtained by horizontal gene transfer.
Paenibacillus is a genus of facultative anaerobic, endospore-forming bacteria, originally included within the genus Bacillus and then reclassified as a separate genus in 1993. Bacteria belonging to this genus have been detected in a variety of environments, such as: soil, water, rhizosphere, vegetable matter, forage and insect larvae, as well as clinical samples. The name reflects: Latin paene means almost, so the paenibacilli are literally "almost bacilli". The genus includes P. larvae, which causes American foulbrood in honeybees, P. polymyxa, which is capable of fixing nitrogen, so is used in agriculture and horticulture, the Paenibacillus sp. JDR-2 which is a rich source of chemical agents for biotechnology applications, and pattern-forming strains such as P. vortex and P. dendritiformis discovered in the early 90s, which develop complex colonies with intricate architectures as shown in the pictures:
Pathogenomics is a field which uses high-throughput screening technology and bioinformatics to study encoded microbe resistance, as well as virulence factors (VFs), which enable a microorganism to infect a host and possibly cause disease. This includes studying genomes of pathogens which cannot be cultured outside of a host. In the past, researchers and medical professionals found it difficult to study and understand pathogenic traits of infectious organisms. With newer technology, pathogen genomes can be identified and sequenced in a much shorter time and at a lower cost, thus improving the ability to diagnose, treat, and even predict and prevent pathogenic infections and disease. It has also allowed researchers to better understand genome evolution events - gene loss, gain, duplication, rearrangement - and how those events impact pathogen resistance and ability to cause disease. This influx of information has created a need for bioinformatics tools and databases to analyze and make the vast amounts of data accessible to researchers, and it has raised ethical questions about the wisdom of reconstructing previously extinct and deadly pathogens in order to better understand virulence.
Staphylococcus simiae is a Gram-positive, coagulase-negative member of the bacterial genus Staphylococcus consisting of clustered cocci. This species was originally isolated from the gastrointestinal tract of South American squirrel monkeys, Saimiri sciureus, and found to be genetically similar to S. aureus, but more biochemically similar to S. piscifermentans. A draft genome of S. simiae was sequenced.
Listeria ivanovii is a species of bacteria in the genus Listeria. The listeria are rod-shaped bacteria, do not produce spores, and become positively stained when subjected to Gram staining. Of the six bacteria species within the genus, L. ivanovii is one of the two pathogenic species. In 1955 Bulgaria, the first known isolation of this species was found from sheep. It behaves like L. monocytogenes, but is found almost exclusively in ruminants. The species is named in honor of Bulgarian microbiologist Ivan Ivanov. This species is facultatively anaerobic, which makes it possible for it to go through fermentation when there is oxygen depletion.
Pelobacter carbinolicus is a species of bacteria that ferments 2,3-butanediol and acetoin. It is Gram-negative, strictly anaerobic and non-spore-forming. Gra Bd 1 is the type strain. Its genome has been sequenced.
Helicobacter canadensis is a bacterium in the Helicobacteraceae family, Campylobacterales order, first isolated from humans with diarrhea. Its genome has been sequenced.
Haloquadratum walsbyi is a species of Archaea in the genus Haloquadratum, known for its square shape and halophilic nature.
Listeria rocourtiae is a species of bacteria. It is a Gram-positive, facultatively anaerobic, motile, non-spore-forming bacillus. It is non-pathongenic and non-hemolytic. The species was first isolated from pre-cut lettuce in Salzburg, Austria in 2002. It is named in honor of Jocelyne Rocourt, "whose work had a major impact on the taxonomy of the genus Listeria."
Listeria aquatica is a Gram-positive, facultatively anaerobic, nonmotile, non-spore-forming rod-shaped species of bacteria. It is not pathogenic. It was discovered from running water in Florida, and was first described in 2014. Its name comes from Latin, "found in water, aquatic".
Listeria riparia is a species of bacteria. It is a Gram-positive, facultatively anaerobic, non-motile, non-spore-forming bacillus. It is non-pathongenic. Its name refers to the riparian zone, and its discovery was first published in 2014.
Listeria cornellensis is a species of bacteria. It is a Gram-positive, facultatively anaerobic, non-motile, non-spore-forming bacillus. It is non-pathogenic. The species was named after Cornell University, and its discovery was first published in 2014.
Listeria floridensis is a species of bacteria. It is a Gram-positive, facultatively anaerobic, non-motile, non-spore-forming bacillus. It is non-pathongenic and non-hemolytic. The species was discovered in and named after Florida, and its discovery was first published in 2014.
Listeria grandensis is a species of bacteria. It is a Gram-positive, facultatively anaerobic, non-motile, non-spore-forming bacillus. It is non-pathongenic and non-hemolytic. The species was discovered in and named after Grand County, Colorado, and its discovery was first published in 2014.
Listeria booriae is a Gram-positive, facultatively anaerobic, nonmotile, non-spore-forming rod-shaped species of bacteria. It is not pathogenic and nonhemolytic. It was discovered in a dairy processing plant in the Northeastern United States, and was first described in 2015. The species name honors "Kathryn Boor, a United States food scientist, for her contribution to the understanding of the biology of Listeria."
Listeria newyorkensis is a species of bacteria. It is a Gram-positive, facultatively anaerobic, non-motile, non-spore-forming bacillus. It is non-pathogenic and non-hemolytic. It was discovered in a seafood processing plant in New York, and was first published in 2015.
Listeria weihenstephanensis is a species of bacteria. It is a Gram-positive, facultatively anaerobic, non-motile, non-spore-forming bacillus. It is non-pathongenic and non-hemolytic. It was discovered in a Lemna trisulca plant in a pond in Bavaria, Germany. The species name reflects the region in which it was first isolated, and was first published in 2013.
Listeria seeligeri is a Gram-positive, facultatively anaerobic, motile, nonspore-forming, bacillus-shaped species of bacteria. It is not pathogenic. The species was first isolated from plants, soil, and animal feces in Europe, was first proposed in 1983, and is named after Heinz P. R. Seeliger. Seeliger first proposed the species L. ivanovii and L. innocua, and published extensively on members of the genus Listeria.
Listeria innocua is a species of Gram-positive, rod-shaped bacteria. It is motile, facultatively anaerobic, and non-spore-forming. L. innocua was named innocua (innocuous) because, in contrast to Listeria monocytogenes, it does not readily cause disease in mammals. Another Listeria species, L. seeligeri, was named after one of the discoverers of L. innocua.
