Oxalate oxidoreductase

Last updated
Oxalate oxidoreductase
Identifiers
EC no. 1.2.7.10
Databases
IntEnz IntEnz view
BRENDA BRENDA entry
ExPASy NiceZyme view
KEGG KEGG entry
MetaCyc metabolic pathway
PRIAM profile
PDB structures RCSB PDB PDBe PDBsum
Search
PMC articles
PubMed articles
NCBI proteins

Oxalate oxidoreductases (EC 1.2.7.10) (OOR) are a relatively recently discovered group of enzymes that break down oxalate, a problematic molecule nutritionally. The first one to have been characterized has the systematic name oxalate:ferredoxin oxidoreductase. [1] [2] This enzyme catalyses the following chemical reaction:

+ 2 oxidised ferredoxin
 
 
 
2 H+
Oxalate oxidoreductase
 
2 H+
 
2 CO2 + 2 reduced ferredoxin
 

The enzyme is known to contain thiamine diphosphate and [4Fe-4S] iron–sulfur clusters. [3]

Another OOR from acetogenic bacteria, a thiamine pyrophosphate (TPP)-dependent OOR, had its mechanism of action decoded step by step under X-ray crystallography to rather simplistically (one-carbon) split oxalate, producing low-potential electrons and CO2. [4]

References

  1. Daniel SL, Pilsl C, Drake HL (February 2004). "Oxalate metabolism by the acetogenic bacterium Moorella thermoacetica". FEMS Microbiology Letters. 231 (1): 39–43. doi: 10.1016/S0378-1097(03)00924-8 . PMID   14769464.
  2. Pierce E, Becker DF, Ragsdale SW (December 2010). "Identification and characterization of oxalate oxidoreductase, a novel thiamine pyrophosphate-dependent 2-oxoacid oxidoreductase that enables anaerobic growth on oxalate". The Journal of Biological Chemistry. 285 (52): 40515–24. doi: 10.1074/jbc.M110.155739 . PMC   3003350 . PMID   20956531.
  3. Enzyme 1.2.7.10 at KEGG Pathway Database.
  4. Gibson MI, Chen PY, Johnson AC, Pierce E, Can M, Ragsdale SW, Drennan CL (January 2016). "One-carbon chemistry of oxalate oxidoreductase captured by X-ray crystallography". Proceedings of the National Academy of Sciences of the United States of America. 113 (2): 320–5. Bibcode:2016PNAS..113..320G. doi: 10.1073/pnas.1518537113 . PMC   4720323 . PMID   26712008.