Stromatinia cepivora | |
---|---|
Scientific classification | |
Kingdom: | |
Division: | |
Class: | |
Order: | |
Family: | |
Genus: | |
Species: | S. cepivora |
Binomial name | |
Stromatinia cepivora (Berk.) Whetzel (1945) [1] | |
Synonyms [1] | |
|
Stromatinia cepivora is a fungus in the division Ascomycota. It is the teleomorph of Sclerotium cepivorum, the cause of white rot in onions, garlic, and leeks. [2] The infective sclerotia remain viable in the soil for many years and are stimulated to germinate by the presence of a susceptible crop.
Sclerotium cepivorum is the asexual reproductive form of Stromatinia cepivora and is a plant pathogen, causing white rot in Allium species, particularly onions, leeks, and garlic. [3] On a worldwide basis, white rot is probably the most serious threat to Allium crop production of any disease. [4] This is a soil borne fungus and affects susceptible crops planted in infected soil containing sclerotia. The sclerotia that are developed in the life cycle can be spread to other fields by unsuccessful sanitation practices. The sclerotia can remain viable in the soil for years and germinate with a susceptible host to cause disease; therefore it is important to practice good sanitation efforts. [5] Where the disease has occurred, recropping with further Allium species should be avoided for many years. The risk of infection can be reduced as far as possible in clean land by using disease-free planting material and avoiding contamination from infected fields. Making sure to clean machinery, boots and equipment will help to stop the spread of disease from an infected field. With infection occurring in cooler weather (50–70 °F (10–21 °C)), planting the crops at the right time is also important to not institute disease. [6]
The first symptoms noted with S. cepivora are the foliar symptoms. Plants are stunted in growth with yellow and wilting foliage. The leaves eventually die and fall off [7] with the older leaves dying first and then the aerial leaves. Soil conditions and the environment are determinants for extent of damage to the plant. The pathogen grows in moist cold temperatures. [8] So, in the right conditions, pathogenic activity increases as the root systems develop. The disease attacks at all stages of growth, which leaves the plant to turn yellow and wilt when fully developed because the roots are rotting. Mycelial growth is a sign that appears on the roots and spreads to the bulb causing it to rot. This mycelial growth can be seen at the base of the stem when foliage is yellowing and the foliar symptoms are first appearing. Black globular sclerotia, that resemble poppy seeds can also appear on the mycelium. These black sclerotia are about 0.5mm(1/32in) in diameter. [3] These survival structures (sclerotia) can detach and persist for years in a dormant state, waiting for a susceptible host. [7]
The White Rot pathogen is dependent upon temperature. Environmental conditions influence the germination with it favoring cooler weather (50-70 F). [6] If there is high soil moisture present, germination and infection will be favored. However, the sclerotia and fungal growth are inhibited above 70 F. [9] With the pathogen favoring cool wet summers, irrigation can also be a problem in spreading the disease from an infected field to a clean field. Therefore, this pathogen is of great concern to growers experiencing cool wet summers.
Stromatinia cepivora is a soil borne fungus. This is a monocyclic disease meaning it only has one reproductive cycle a season. This is a unique fungus as it does not produce any spores of importance to a normal life cycle. [9] It exists and overwinters as sclerotia (the survival stage). These small black globular structures are resistant to adverse temperatures and can remain dormant in the soil for years even without a host. Sclerotia germinate in response to root exudates. Weather is also a factor of germination and hyphae growth. Mycelium grow through the soil and form an appresoria once a host root is available. Appresoria are able to attach and penetrate the host. Mycelium grow out from the roots and can spread to a neighboring plant which creates the row of disease. Even small amounts of sclerotia can cause disease and be difficult to control. Sclerotia infect the host and spread. They are formed on the decaying host tissue and then are left free in the soil. [10] To control the disease there needs to be a reduction in the number of sclerotia in the soil so fungus growth can be halted and unable to grow. Overall, multiple controls are necessary to produce an adequate yield in infected fields.
Anything that moves the infested soil, such as wind, water, equipment, boots, etc., will move sclerotia and cause the disease to spread.
This is serious disease for plants of the Allium genus. The soil borne fungus can persist in the soil for many years. This disease is present in all Allium-producing regions making it a threat in the Allium production industry and a worldwide disease. It has been found in the United States 10 times with the first in 1918 in Oregon and the latest in 2014 in an onion field. [8] Onions and garlic are economically important vegetables in the world. S. cepivora is one of the most destructive diseases carrying high loss in onion and garlic. Once land has been infested, it is considered not suitable for garlic or onion production for up to 40 or more years. [11] Furthermore, an extremely small infection can be devistating. If just one sclerotium is in 20 pounds of soil, it will cause disease and significant crop loss. [2]
“One sclerotium per 20 pounds of soil will cause disease and results in measurable crop loss.”
Knowing when to plant and harvest the crops is important to avoid the pathogen. Referring to the environmental section, this pathogen thrives under cool temps and moisture in the soil. [9] Irrigation can cause disease, therefore if disease is present, looking at problems with moisture and reducing problems with irrigation can help to combat the pathogen and keep the disease in infected fields from spreading. Also planting in the spring and harvesting in the fall can help to reduce the disease. [6]
One way to control this pathogen is planting clean seed. By planting clean seed and not infected seed, you are stopping the spread of disease. It is transported and spread in contaminated soil, for example on tools or equipment. If the infected soil is moved, the sclerotia will be dispersed as well. This is a survival structure in the life cycle of the pathogen that can stay active in the soil up to 30 years without a suitable host. [6] By having sanitation practices in place the pathogen will not be spread. An example of a sanitation practice is washing the equipment with water and making sure all remnants of soil are gone so it cannot spread to a different allotment. Lastly, making sure that soil is not spread by tools or boots by washing them as well. [6]
As sclerotia are a survival structure in the life cycle for the pathogen, it is important to reduce and eliminate sclerotia in the soil. One effective way to reduce sclerotia is sclerotia germination stimulants. These germination stimulants can reduce sclerotia by 90%. [12] One way to do this is using diallyl disulfide (DADS). This chemical is what triggers sclerotia to germinate. [12] Upon using DADS in the soil, no Allium crops can be grown in that soil for a year to keep the treatment effective. If there are Allium crops growing they will be able to complete their lifecycle and keep sclerotia in the soil. [12] Therefore, DADS is applied artificially in the field with no Allium species, which in turn has sclerotia germinate and unable to find a host and die rather than lay dormant in the soil. [13] This can also be done by applying a garlic extract or the use of certain petroleum-based products. [6] Dipping seed garlic in water at 115 °F (46 °C) is effective, but higher temperatures may kill the cloves. It is also important to use fungicides with the chemical DADS. There are three fungicides that are registered for white rot. They are: tebuconazole, fludioxonil and boscalid with tebuconazole being the most effective. [12] All of these fungicides need to be applied right at planting, as later fungicide applications are not effective to control disease. It is also important to note that once an infection is found there are no chemical controls to stop or reduce disease during that season. [14]
The three-cornered leek ( Allium triquetrum ) has been introduced into Australia where it has spread and become established in nutrient-deficient, damp habitats. The plant is now considered to be a noxious invasive species, as it is difficult to control or eradicate. S. cepivora is being investigated as a possible biological control agent for the plant. No naturally occurring members of the genus Allium occur in Australia, and in a trial, the fungus was found to be effective at killing all but one of the target samples on which it was tested. However, the researchers involved in the study acknowledged, "Releasing a virulent pathogen for cultivated Allium species into bushland or pasture is controversial and any field release would require safeguards against spread to areas suitable for the production of cultivated Allium species, such as onions, leeks and garlic, before S. cepivora could be introduced as a potential biological control agent. [15]
Botrytis cinerea is a necrotrophic fungus that affects many plant species, although its most notable hosts may be wine grapes. In viticulture, it is commonly known as "botrytis bunch rot"; in horticulture, it is usually called "grey mould" or "gray mold".
Texas root rot is a disease that is fairly common in Mexico and the southwestern United States resulting in sudden wilt and death of affected plants, usually during the warmer months. It is caused by a soil-borne fungus named Phymatotrichopsis omnivora that attacks the roots of susceptible plants. It was first discovered in 1888 by Pammel and later named by Duggar in 1916.
A sclerotium, is a compact mass of hardened fungal mycelium containing food reserves. One role of sclerotia is to survive environmental extremes. In some higher fungi such as ergot, sclerotia become detached and remain dormant until favorable growth conditions return. Sclerotia initially were mistaken for individual organisms and described as separate species until Louis René Tulasne proved in 1853 that sclerotia are only a stage in the life cycle of some fungi. Further investigation showed that this stage appears in many fungi belonging to many diverse groups. Sclerotia are important in the understanding of the life cycle and reproduction of fungi, as a food source, as medicine, and in agricultural blight management.
White onion or Allium cepa are a cultivar of dry onion which have a distinct light and mild flavour profile. Much like red onions, they have a high sugar and low sulphur content, and thus have a relatively short shelf life. White onions are used in a variety of dishes, such as those of Mexican and European origin. Their uses in dishes often relate to their mild nature, they are often included in dishes to provide a light, fresh and sour taste to dishes and are often added uncooked to dishes such as salads.
Rhizoctonia solani is a species of fungus in the order Cantharellales. Basidiocarps are thin, effused, and web-like, but the fungus is more typically encountered in its anamorphic state, as hyphae and sclerotia. The name Rhizoctonia solani is currently applied to a complex of related species that await further research. In its wide sense, Rhizoctonia solani is a facultative plant pathogen with a wide host range and worldwide distribution. It causes various plant diseases such as root rot, damping off, and wire stem. It can also form mycorrhizal associations with orchids.
Damping off is a horticultural disease or condition, caused by several different pathogens that kill or weaken seeds or seedlings before or after they germinate. It is most prevalent in wet and cool conditions.
Leveillula taurica is an obligate fungal pathogen, from the phylum Ascomycota, which causes powdery mildew on onion. This disease prefers warm, dry environments. It is rare in the United States, and is currently restricted to western states. Globally, it is also a minor problem with limited occurrences in the Middle East, Europe, and South America. L. taurica causes powdery mildew of onions, but is also known to infect other allium, solanaceous, and cucurbit species. The disease has appeared in parts of the Middle East, the Mediterranean, and South and North America. Currently, it is not a cause for major concern in the U.S. and throughout the world, as its geographic extent is sparse. In addition, it is relatively easy to control through basic sanitation and reducing water stress.
Macrophomina phaseolina is a Botryosphaeriaceae plant pathogen fungus that causes damping off, seedling blight, collar rot, stem rot, charcoal rot, basal stem rot, and root rot on many plant species.
Sclerotinia sclerotiorum is a plant pathogenic fungus and can cause a disease called white mold if conditions are conducive. S. sclerotiorum can also be known as cottony rot, watery soft rot, stem rot, drop, crown rot and blossom blight. A key characteristic of this pathogen is its ability to produce black resting structures known as sclerotia and white fuzzy growths of mycelium on the plant it infects. These sclerotia give rise to a fruiting body in the spring that produces spores in a sac which is why fungi in this class are called sac fungi (Ascomycota). This pathogen can occur on many continents and has a wide host range of plants. When S. sclerotiorum is onset in the field by favorable environmental conditions, losses can be great and control measures should be considered.
Stemphylium solani is a plant pathogen fungus in the phylum Ascomycota. It is the causal pathogen for grey leaf spot in tomatoes and leaf blight in alliums and cotton, though a wide range of additional species can serve as hosts. Symptoms include white spots on leaves and stems that progress to sunken red or purple lesions and finally leaf necrosis. S. solani reproduces and spreads through the formation of conidia on conidiophores. The teleomorph name of Stemphyllium is Pleospora though there are no naturally known occurrences of sexual reproduction. Resistant varieties of tomato and cotton are common, though the pathogen remains an important disease in Chinese garlic cultivation.
Pyrenochaeta terrestris is a fungal plant pathogen that infects maize, sweet potatoes, and strawberries. This plant pathogen causes a disease in onion that is commonly called pink root. P. terrestris is also known to infect shallots, garlic, leeks, chives, cantaloupe, carrots, cauliflower, cowpea, cucumbers, eggplants, lima beans, millet, oats, peas, peppers, potatoes, spinach, sugarcane, and tomatoes.
Magnaporthe salvinii is a fungus known to attack a variety of grass and rice species, including Oryza sativa and Zizania aquatica. Symptoms of fungal infection in plants include small, black, lesions on the leaves that develop into more widespread leaf rot, which then spreads to the stem and causes breakage. As part of its life cycle, the fungus produces sclerotia that persist in dead plant tissue and the soil. Management of the fungus may be effected by tilling the soil, reducing its nitrogen content, or by open field burning, all of which reduce the number of sclerotia, or by the application of a fungicide.
Colletotrichum coccodes is a plant pathogen, which causes anthracnose on tomato and black dot disease of potato. Fungi survive on crop debris and disease emergence is favored by warm temperatures and wet weather.
This article summarizes different crops, what common fungal problems they have, and how fungicide should be used in order to mitigate damage and crop loss. This page also covers how specific fungal infections affect crops present in the United States.
Peronospora destructor is a plant pathogen. It causes downy mildew on leaves of cultivated and wild Allium. Allium cepa is most often affected, while Allium schoenoprasum (chives) and Allium porrum (leek) are only occasionally affected.
Botrytis allii is a plant pathogen, a fungus that causes neck rot in stored onions and related crops. Its teleomorph is unknown, but other species of Botrytis are anamorphs of Botryotinia species. The species was first described scientifically by Mancel Thornton Munn in 1917.
Verticillium dry bubble, recently named Lecanicillium fungicola, is a mycoparasite that attacks white button mushrooms, among other hosts, during its generative period. L. fungicola infects the casing layer on the cap structure of several edible mushrooms. This fungal pathogen does not typically infect wild mushrooms, but more commonly cultivated mushrooms are infected such as A. bisporus, which are typically grown in large quantities. Severity of disease depends on several factors, including timing of infection and environmental conditions. Dry bubble follows the typical verticillium life cycle, although insect vectors play a large role in the spread of this disease. Control for L. fungicola is limited, and strict measures must be taken to prevent the spread of infection. L. fungicola is a devastating pathogen in the mushroom industry and causes significant losses in the commercial production of its main host A. bisporus. Annual costs for mushroom growers are estimated at 2–4% of total revenue.
Botrytis squamosa is a fungus that causes leaf blight on onion that is distinctly characterized by the two stages – leaf spotting followed by blighting. The pathogen is an ascomycete that belongs to the family Sclerotiniaceae in the order Helotiales. The lesions start out as whitish streaks and take on a yellow tinge as they mature. They cause yield losses up to 30%. This fungus is endemic to the USA and has also been reported in Europe, Asia, and Australia. Typical management of this disease includes chemical fungicides with significant efforts being made to establish a means of biological control.
Puccinia porri is a species of rust fungus that causes leek rust. It affects leek, garlic, onion, and chives, and usually appears as bright orange spots on infected plants.
Agroathelia rolfsii is a corticioid fungus in the order Amylocorticiales. It is a facultative plant pathogen and is the causal agent of "southern blight" disease in crops.