Aquilegia is a genus of about 60–70 species of perennial plants that are found in meadows, woodlands, and at higher altitudes throughout the Northern Hemisphere, known for the spurred petals of their flowers.
The Zygnematales, also called the Conjugatales, are an order of green algae, comprising several thousand different species in two families. The larger family Zygnemataceae, with well-known genera such as Zygnema and Spirogyra, includes members that grow as unbranched filaments, which grow longer through normal cell division. This group includes the desmids. Most members of both families live in freshwater, and form an important component of the algal scum that grows on or near plants, rocks, and various debris.
Hornworts are a group of non-vascular Embryophytes constituting the division Anthocerotophyta. The common name refers to the elongated horn-like structure, which is the sporophyte. As in mosses and liverworts, hornworts have a gametophyte-dominant life cycle, in which cells of the plant carry only a single set of genetic information; the flattened, green plant body of a hornwort is the gametophyte stage of the plant.
Chlamydomonas reinhardtii is a single-cell green alga about 10 micrometres in diameter that swims with two flagella. It has a cell wall made of hydroxyproline-rich glycoproteins, a large cup-shaped chloroplast, a large pyrenoid, and an eyespot that senses light.
Oxalis corniculata, the creeping woodsorrel, procumbent yellow sorrel or sleeping beauty, is a somewhat delicate-appearing, low-growing herbaceous plant in the family Oxalidaceae.
Paulowniaceae are a family of flowering plants within the Lamiales. They are a monophyletic and monogeneric family of trees with currently 7 confirmed species. They were formerly placed within Scrophulariaceae sensu lato, or as a segregate of the Bignoniaceae.
A nuclear gene is a gene that has its DNA nucleotide sequence physically situated within the cell nucleus of a eukaryotic organism. This term is employed to differentiate nuclear genes, which are located in the cell nucleus, from genes that are found in mitochondria or chloroplasts. The vast majority of genes in eukaryotes are nuclear.
A transplastomic plant is a genetically modified plant in which genes are inactivated, modified or new foreign genes are inserted into the DNA of plastids like the chloroplast instead of nuclear DNA.
The Mesostigmatophyceae are a class of basal green algae found in freshwater. In a narrow circumscription, the class contains a single genus, Mesostigma. AlgaeBase then places the order within its circumscription of Charophyta. A clade containing Chlorokybus and Spirotaenia may either be added, or treated as a sister, with Chlorokybus placed in a separate class, Chlorokybophyceae. When broadly circumscribed, Mesostigmatophyceae may be placed as sister to all other green algae, or as sister to all Streptophyta.
Zygnematophyceae is a class of green algae in the paraphylum streptophyte algae, also referred to as Charophyta, consisting of more than 4000 described species. The Zygnematophyceae are the sister clade of the Embryophyta.
Red algae, or Rhodophyta, are one of the oldest groups of eukaryotic algae. The Rhodophyta comprises one of the largest phyla of algae, containing over 7,000 currently recognized species with taxonomic revisions ongoing. The majority of species (6,793) are found in the Florideophyceae (class), and mostly consist of multicellular, marine algae, including many notable seaweeds. Red algae are abundant in marine habitats but relatively rare in freshwaters. Approximately 5% of red algae species occur in freshwater environments, with greater concentrations found in warmer areas. Except for two coastal cave dwelling species in the asexual class Cyanidiophyceae, there are no terrestrial species, which may be due to an evolutionary bottleneck in which the last common ancestor lost about 25% of its core genes and much of its evolutionary plasticity.
Chloroplast DNA (cpDNA) is the DNA located in chloroplasts, which are photosynthetic organelles located within the cells of some eukaryotic organisms. Chloroplasts, like other types of plastid, contain a genome separate from that in the cell nucleus. The existence of chloroplast DNA was identified biochemically in 1959, and confirmed by electron microscopy in 1962. The discoveries that the chloroplast contains ribosomes and performs protein synthesis revealed that the chloroplast is genetically semi-autonomous. The first complete chloroplast genome sequences were published in 1986, Nicotiana tabacum (tobacco) by Sugiura and colleagues and Marchantia polymorpha (liverwort) by Ozeki et al. Since then, a great number of chloroplast DNAs from various species have been sequenced.
Wightia is a genus of flowering plants tentatively sister to the Phrymaceae which currently contains only two species. It grows as a tree, or a hemiepiphytic pseudo-vine, up to 15 metres (49 ft) tall. It is found in South Asia and South East Asia, from Nepal and India to Thailand, Vietnam and China's Yunnan Province, at altitudes below 2,500 m (8,200 ft). There are still morphological characters as well as nuclear genome data to support Wightia as sister to Paulownia leading it to be of proposed hybrid origin from Phrymaceae and Paulowniaceae. Due to chloroplast and mitochondrial data showing Wightia as sister to Phrymaceae it is proposed that a new family Wightiaceae be recognized.
Prunus subg. Prunus is a subgenus of Prunus. This subgenus includes plums, apricots and bush cherries. Some species conventionally included in Prunus subg. Amygdalus are clustered with plum/apricot species according to molecular phylogenetic studies. Shi et al. (2013) has incorporated subg. Amygdalus into subg. Prunus, thereby including almonds and peaches in this subgenus. The species in this subgenus have solitary flowers or 2–3 in a fascicle.
A nectar spur is a hollow extension of a part of a flower. The spur may arise from various parts of the flower: the sepals, petals, or hypanthium, and often contain tissues that secrete nectar (nectaries). Nectar spurs are present in many clades across the angiosperms, and are often cited as an example of convergent evolution.
Genome skimming is a sequencing approach that uses low-pass, shallow sequencing of a genome, to generate fragments of DNA, known as genome skims. These genome skims contain information about the high-copy fraction of the genome. The high-copy fraction of the genome consists of the ribosomal DNA, plastid genome (plastome), mitochondrial genome (mitogenome), and nuclear repeats such as microsatellites and transposable elements. It employs high-throughput, next generation sequencing technology to generate these skims. Although these skims are merely 'the tip of the genomic iceberg', phylogenomic analysis of them can still provide insights on evolutionary history and biodiversity at a lower cost and larger scale than traditional methods. Due to the small amount of DNA required for genome skimming, its methodology can be applied in other fields other than genomics. Tasks like this include determining the traceability of products in the food industry, enforcing international regulations regarding biodiversity and biological resources, and forensics.
Aquilegia barnebyi, commonly known as the oil shale columbine or Barneby's columbine, is a perennial species of flowering plant in the buttercup family, with a native range comprising northeastern Utah and northwestern Colorado in the United States. It is named after Rupert Charles Barneby, who, with Harry Dwight Dillon Ripley, first discovered it in Colorado.
Vitis pseudoreticulata, commonly known as the wild Chinese grape or eastern Chinese grape, is a Chinese liana in the grape family. It is native to eastern China, specifically the provinces of Anhui, Fujian, Guangdong, Guangxi, Henan, Hubei, Hunan, Jiangsu, Jiangxi, and Zhejiang. The plant grows at altitudes of 100–300 m (330–980 ft) and bears medium-sized purplish-black grapes. It has been observed to be resistant to damage from moisture, white rot, anthracnose, and Downy mildew.
