Ochromonadales | |
---|---|
Light and transmission electron micrographs of Spumella sinechrysos , showing long flagellum (LF), short flagellum (SF) and leucosin vesicle (arrow). Scale bars = 2 μm. | |
Scientific classification | |
Domain: | Eukaryota |
Clade: | Diaphoretickes |
Clade: | SAR |
Clade: | Stramenopiles |
Phylum: | Gyrista |
Subphylum: | Ochrophytina |
Class: | Chrysophyceae |
Order: | Ochromonadales Pascher 1910 |
Family: | Ochromonadaceae Lemmermann 1899 [1] |
Type genus | |
Ochromonas Vysotskii 1887 [2] | |
Synonyms [3] | |
Ochromonadales is an order of single-celled algae belonging to the class Chrysophyceae, also known as golden algae. Initially it contained numerous groups of flagellates that were not closely related. During the late 20th century, advancements in molecular and ultrastructural studies allowed the transfer of many of these groups out of Ochromonadales, and the order was reduced to a single family Ochromonadaceae. They are aquatic single-celled flagellated algae, with two heterokont flagella each, some of which have secondarily lost their chloroplasts and appear colorless.
Species of this order are flagellates, composed of cells capable of swimming by using two flagella. Though ancestrally photosynthetic, some species have secondarily lost this ability, and appear colourless. These are heterotrophic, and can be phagotrophic. [8] Some are mixotrophic, capable of both photosynthesis and phagotrophy, such as Poterioomonas and Ochromonas . [9] They can be found in marine and freshwater habitats. [10]
Ochromonadales is an order of golden algae (class Chrysophyceae), a group of photosynthetic heterokonts (phylum Ochrophyta). [8] It initially contained numerous families united only by being primarily monadoid (flagellate), palmelloid or amoeboid throughout their life cycle. For this reason, it included completely unrelated organisms such as the Bicosoecaceae (now outside the phylum Ochrophyta) or the Pedinellaceae (now in class Dictyochophyceae). [11]
Its definition changed over time. In a 1957 classification of golden algae, French phycologist Pierre Bourrelly included in the order Ochromonadales all species that lack a cell wall and have a biflagellate stage during their life cycle, while those with a uniflagellate stage belonged to order Chromulinales. He included six families in the former: four flagellate families (Ochromonadaceae, Synuraceae, Coccolithophoraceae and Dinobryaceae) and two palmelloid families (Phaeocystaceae and Naegeliellaceae). [12] Eventually, Coccolithophoraceae and Phaeocystaceae were moved to the division Haptophyta instead. [13]
In 1968, Bourrelly again modified the composition of the order, placing within it all monadoid, coccoid or filamentous golden algae that generate cells with two flagella in at least one stage of their life cycle. He implemented three suborders: [14]
In the following decades, most of these families were transferred to other orders and classes with the advent of ultrastructural studies and molecular phylogenetics. Synuraceae was moved to a new chrysophycean order Synurales established in 1987. [15] Around the same time, Naegeliellaceae was merged with Chromulinaceae. [16] [17] Phaeothamniaceae and Chrysapionaceae were moved to a new class Phaeothamniophyceae established in 1998. [18] Ruttnera, the type genus of Ruttneraceae, was merged with Chrysotila which belongs to Isochrysidaceae (Haptophyta). [3]
Some authors merged Ochromonadales and Chromulinales, making the families Chrysococcaceae and Chromulinaceae new additions to the order. In addition, Paraphysomonadaceae, described in 1983, [19] was also assigned to Ochromonadales. Jahn Throndsen proposed in 1993 classifying five families within Ochromonadales: Ochromonadaecae, Chrysococcaceae, Chromulinaceae, Dinobryaceae and Paraphysomonadaceae. [20] The latter was eventually separated into its own order Paraphysomonadida. Other authors rejected the merge and maintained a separate Chromulinales, which took away Dinobryaceae, Chrysococcaceae and Chromulinaceae. In the end, only the family Ochromonadaceae remained. [21] [22]
This family, first described by German botanist Ernst Lemmermann in 1899, contains genera of free-floating, naked single-celled organisms with two flagella. Originally it only contained Ochromonas , its type genus. [1] Its circumscription was later expanded by Bourrelly to include other genera. [14] Some of these genera initially belonged to their own families, all of which became synonyms: Dendromonas , the type genus of Dendromonadaceae, described in 1878 by Friedrich Stein (as Dendromonadina); [4] Spumella , the type of Spumellaceae, described in 1880 by William Saville-Kent (as Spumellidae); [5] Uroglena , the type of Uroglenaceae, described in the same 1899 publication by Lemmermann; [6] Syncrypta , the type of Syncryptaceae, described in 1913 by Franz Poche; and Protoochromonas , the type of Protoochromonadaceae, described in 1961 by Boris Skvortzov. [7] Although Spumellaceae and Dendromonadaceae would have priority due to being described earlier, Ochromonadaceae was conserved because it had a wider usage. [3] [23]
The majority of known chrysophyte diversity falls within the orders Ochromonadales and Synurales. [24] The following genera are included within Ochromonadaceae, the sole family of Ochromonadales:
A flagellate is a cell or organism with one or more whip-like appendages called flagella. The word flagellate also describes a particular construction characteristic of many prokaryotes and eukaryotes and their means of motion. The term presently does not imply any specific relationship or classification of the organisms that possess flagella. However, several derivations of the term "flagellate" are more formally characterized.
The Stramenopiles, also called Heterokonts, are a clade of organisms distinguished by the presence of stiff tripartite external hairs. In most species, the hairs are attached to flagella, in some they are attached to other areas of the cellular surface, and in some they have been secondarily lost. Stramenopiles represent one of the three major clades in the SAR supergroup, along with Alveolata and Rhizaria.
The synurids are a small group of heterokont algae, found mostly in freshwater environments, characterized by cells covered in silica scales.
Pedinellales (ICN) or Pedinellida (ICZN) is a group of single-celled algae found in both marine environments and freshwater.
Chromista is a proposed but polyphyletic biological kingdom, refined from the Chromalveolata, consisting of single-celled and multicellular eukaryotic species that share similar features in their photosynthetic organelles (plastids). It includes all eukaryotes whose plastids contain chlorophyll c and are surrounded by four membranes. If the ancestor already possessed chloroplasts derived by endosymbiosis from red algae, all non-photosynthetic Chromista have secondarily lost the ability to photosynthesise. Its members might have arisen independently as separate evolutionary groups from the last eukaryotic common ancestor.
The Chrysophyceae, usually called chrysophytes, chrysomonads, golden-brown algae or golden algae, are a large group of algae, found mostly in freshwater. Golden algae is also commonly used to refer to a single species, Prymnesium parvum, which causes fish kills.
Chromulinales is an order of Chrysophyceae, golden-brown algae or golden algae. It was first identified and defined by Adolf Pascher (1881–1945) in 1910.
Yellow-green algae or the Xanthophyceae (xanthophytes) are an important group of heterokont algae. Most live in fresh water, but some are found in marine and soil habitats. They vary from single-celled flagellates to simple colonial and filamentous forms. Xanthophyte chloroplasts contain the photosynthetic pigments chlorophyll a, chlorophyll c, β-carotene, and the carotenoid diadinoxanthin. Unlike other Stramenopiles (heterokonts), their chloroplasts do not contain fucoxanthin, which accounts for their lighter colour. Their storage polysaccharide is chrysolaminarin. Xanthophyte cell walls are produced of cellulose and hemicellulose. They appear to be the closest relatives of the brown algae.
The cryptophyceae are a class of algae, most of which have plastids. About 230 species are known, and they are common in freshwater, and also occur in marine and brackish habitats. Each cell is around 10–50 μm in size and flattened in shape, with an anterior groove or pocket. At the edge of the pocket there are typically two slightly unequal flagella.
The raphidophytes, formally known as Raphidophycidae or Raphidophyceae, are a small group of eukaryotic algae that includes both marine and freshwater species. All raphidophytes are unicellular, with large cells, but no cell walls. Raphidophytes possess a pair of flagella, organised such that both originate from the same invagination. One flagellum points forwards, and is covered in hair-like mastigonemes, while the other points backwards across the cell surface, lying within a ventral groove. Raphidophytes contain numerous ellipsoid chloroplasts, which contain chlorophylls a, c1 and c2. They also make use of accessory pigments including β-carotene and diadinoxanthin. Unlike other heterokontophytes, raphidophytes do not possess the photoreceptive organelle typical of this group.
Ochrophytes, also known as heterokontophytes or stramenochromes, are a group of algae. They are the photosynthetic stramenopiles, a group of eukaryotes, organisms with a cell nucleus, characterized by the presence of two unequal flagella, one of which has tripartite hairs called mastigonemes. In particular, they are characterized by photosynthetic organelles or plastids enclosed by four membranes, with membrane-bound compartments called thylakoids organized in piles of three, chlorophyll a and c as their photosynthetic pigments, and additional pigments such as β-carotene and xanthophylls. Ochrophytes are one of the most diverse lineages of eukaryotes, containing ecologically important algae such as brown algae and diatoms. They are classified either as phylum Ochrophyta or Heterokontophyta, or as subphylum Ochrophytina within phylum Gyrista. Their plastids are of red algal origin.
Phaeothamniophycidae is a subclass of heterokont algae. It contains two orders, Phaeothamniales and Pleurochloridellales, and consists of species separated from Chrysophyceae.
Dictyochophyceae sensu lato is a photosynthetic lineage of heterokont algae.
Monas is a genus of Chrysophyceae, described by Otto Friedrich Müller in 1773 as a group of Infusoria. Throughout time, it represented an aggregate genus.
Mallomonas is a genus comprising unicellular algal eukaryotes and characterized by their intricate cell coverings made of silica scales and bristles. The group was first named and classified by Dr. Maximilian Perty in 1852. These organisms live in freshwater and are widely distributed around the world. Some well known species include Mallomonas caudata and Mallomonas splendens.
Synura is a genus of colonial chrysomonad algae covered in silica scales. It is the most conspicuous genus of the order Synurales.
Heteronema is a genus of phagotrophic, flagellated euglenoids that are most widely distributed in fresh water environments. This genus consists of two very distinguishable morphogroups that are phylogenetically closely related. These morphogroups are deciphered based on shape, locomotion and other ultrastructural traits. However, this genus does impose taxonomic problems due to the varying historical descriptions of Heteronema species and its similarity to the genus Paranema. The species H. exaratum, was the first heteronemid with a skidding motion to be sequenced, which led to the discovery that it was not closely related to H. scaphrum, contrary to what was previously assumed, but instead to a sister group of primary osmotrophs. This suggests that skidding heteronemids can also be distinguished phylogenetically, being more closely related to Anisoma, Dinema and Aphageae, than to other species within Heteronema.
Ochromonas is a genus of algae belonging to the family Ochromonadaceae.
Ultrastructural identity is a concept in biology. It asserts that evolutionary lineages of eukaryotes in general and protists in particular can be distinguished by complements and arrangements of cellular organelles. These ultrastructural components can be visualized by electron microscopy.
Pteridomonas is a genus of heterotrophic flagellates belonging to the phylum Ochrophyta. It was described in 1890 by Eugène Penard. Species of this genus descend from a group of photosynthetic algae but have secondarily lost their chloroplasts. They are single-celled flagellates, attached to the substrate by a stalk and distinguished by a ring of tentacles around the single flagellum. They can be found in marine, brackish or freshwater environments.