Rhizobium is a genus of Gram-negative soil bacteria that fix nitrogen. Rhizobium species form an endosymbiotic nitrogen-fixing association with roots of (primarily) legumes and other flowering plants.
Verrucomicrobiota is a phylum of Gram-negative bacteria that contains only a few described species. The species identified have been isolated from fresh water, marine and soil environments and human faeces. A number of as-yet uncultivated species have been identified in association with eukaryotic hosts including extrusive explosive ectosymbionts of protists and endosymbionts of nematodes from genus Xiphinema, residing in their gametes.
Micromonospora is a genus of bacteria of the family Micromonosporaceae. The genus name was first proposed in 1923 by Danish physician Jeppe Ørskov in an attempt to classify what at the time was considered "ray fungi" based on morphology. Members of this genus are found throughout natural soil and sediment environments, as well as in association with roots of plants of various species. The genus is well known for its ability to produce a variety of medically relevant products.
The Hyphomicrobiales are an order of Gram-negative Alphaproteobacteria.
The family Flavobacteriaceae is composed of environmental bacteria. Most species are aerobic, while some are microaerobic to anaerobic; for example Capnocytophaga and Coenonia.
Microbacteriaceae is a family of bacteria of the order Actinomycetales. They are Gram-positive soil organisms.
Paracoccus is a genus of bacteria in the family Rhodobacteraceae.
In taxonomy, Sulfitobacter is a genus of the Rhodobacteraceae.
Novosphingobium is a genus of Gram-negative bacteria that includes N. taihuense, which can degrade aromatic compounds such as phenol, aniline, nitrobenzene and phenanthrene. The species N. aromativorans, which was first found in Ulsan Bay, similarly degrades aromatic molecules of two to five rings.
The Chloroflexota are a phylum of bacteria containing isolates with a diversity of phenotypes, including members that are aerobic thermophiles, which use oxygen and grow well in high temperatures; anoxygenic phototrophs, which use light for photosynthesis ; and anaerobic halorespirers, which uses halogenated organics as electron acceptors.
Microbacterium is a genus of bacteria in the family Microbacteriaceae. Microbacteria are common contaminants of laboratory reagents, which can lead to their being misrepresented in microbiome data.
Chryseobacterium is a genus of Gram-negative bacteria. Chryseobacterium species are chemoorganotrophic, rod shape gram-negative bacteria. Chryseobacterium form typical yellow-orange color colonies due to flexirubin-type pigment. The genus contains more than 100 described species from diverse habitats, including freshwater sources, soil, marine fish, and human hosts.
Nitrospirota is a phylum of bacteria. It includes multiple genera, such as Nitrospira, the largest. The first member of this phylum, Nitrospira marina, was discovered in 1985. The second member, Nitrospira moscoviensis, was discovered in 1995.
Nanohaloarchaea is a clade of diminutive archaea with small genomes and limited metabolic capabilities, belonging to the DPANN archaea. They are ubiquitous in hypersaline habitats, which they share with the extremely halophilic haloarchaea.
The "Aigarchaeota" are a proposed archaeal phylum of which the main representative is Caldiarchaeum subterraneum. It is not yet clear if this represents a new phylum or a Nitrososphaerota order, since the genome of Caldiarchaeum subterraneum encodes several Nitrososphaerota-like features. The name "Aigarchaeota" comes from the Greek αυγή, avgí, meaning "dawn" or "aurora", for the intermediate features of hyperthermophilic and mesophilic life during the evolution of its lineage.
Nocardioides is a Gram-positive, mesophilic and aerobic bacterial genus from the family of Nocardioidaceae.
Chitinophagaceae is an aerobic or facultatively anaerobic and rod-shaped family of bacteria in the phylum Bacteroidota.
