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References
- 1 2 3 4 5 Trapnell C, Pachter L, Salzberg SL (May 2009). "TopHat: discovering splice junctions with RNA-Seq". Bioinformatics. 25 (9): 1105–11. doi:10.1093/bioinformatics/btp120. PMC 2672628 . PMID 19289445.
- 1 2 "TopHat". ccb.jhu.edu. Retrieved 2018-04-17.
- ↑ Kim D, Pertea G, Trapnell C, Pimentel H, Kelley R, Salzberg SL (April 2013). "TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions". Genome Biology. 14 (4): R36. doi:10.1186/gb-2013-14-4-r36. PMC 4053844 . PMID 23618408.
- ↑ "Bowtie & Tophat". www.biostars.org. Retrieved 2018-04-24.
- ↑ Brueffer C, Saal LH (May 2016). "TopHat-Recondition: a post-processor for TopHat unmapped reads". BMC Bioinformatics. 17 (1): 199. doi:10.1186/s12859-016-1058-x. PMC 4855331 . PMID 27142976.
