Asama virus

Last updated
Asama orthohantavirus
Virus classification OOjs UI icon edit-ltr.svg
(unranked): Virus
Realm: Riboviria
Kingdom: Orthornavirae
Phylum: Negarnaviricota
Class: Ellioviricetes
Order: Bunyavirales
Family: Hantaviridae
Genus: Orthohantavirus
Species:
Asama orthohantavirus

Asama orthohantavirus(ASAV), also called Asama virus, is a single-stranded, enveloped, segmented negative-sense RNA hantavirus. [1] The hantavirus was isolated in Japan from Japanese shrew mole. [1] Hantaviruses harbored by shrews are genetically closer to ASAV than to hantaviruses harbored by rodents. [1] Host-switching may be evident in the future due to the viruses closeness to soricine shrew-borne hantaviruses. [1] The detection of the ASAV was the first hantavirus found to be hosted by members of the family Talpidae , which includes shrew moles. [2] Thoughts on hantavirus evolutionary history has expanded due to the discovery of ASAV. [1]

Contents

Natural reservoir

Asama virus was isolated through RNA extracts from lung tissues of the Japanese shrew mole ( Urotrichus talpoides ), captured in Japan between February and April 2008. It is one of the first hantaviruses found in a mole.[ citation needed ]

Virology

Asama virus is genetically closer to other hantaviruses harbored by shrews than by rodents. However, the nucleocapsid protein is similar to that of rodent and shrew-borne hantaviruses. Phylogenetic analyses positions it closest to soricine shrew-borne hantaviruses. This suggests a possible host-switching event in the distant past.[ citation needed ]

Asama virus is related to soricine shrew-borne hantaviruses that are found in North America, Europe, and Asia. This relation was discovered through phylogenetic analyses. The relationship between the two hantaviruses may suggest parallel evolution associated with cross-species transmission. [3]

See also

Related Research Articles

<i>Orthohantavirus</i> Genus of viruses

Orthohantavirus is a genus of single-stranded, enveloped, negative-sense RNA viruses in the family Hantaviridae within the order Bunyavirales. Members of this genus may be called orthohantaviruses or simply hantaviruses.

<span class="mw-page-title-main">Sin Nombre virus</span> Prototypical agent of hantavirus cardiopulmonary syndrome

Sin Nombre virus (SNV) is the most common cause of hantavirus pulmonary syndrome (HPS) in North America. Sin Nombre virus is transmitted mainly by the eastern deer mouse. In its natural reservoir, SNV causes an asymptomatic, persistent infection and is spread through excretions, fighting, and grooming. Humans can become infected by inhaling aerosols that contain rodent saliva, urine, or feces, as well as through bites and scratches. In humans, infection leads to HPS, an illness characterized by an early phase of mild and moderate symptoms such as fever, headache, and fatigue, followed by sudden respiratory failure. The case fatality rate from infection is high, at 30–50%.

<i>Bunyavirales</i> Order of RNA viruses

Bunyavirales is an order of segmented negative-strand RNA viruses with mainly tripartite genomes. Member viruses infect arthropods, plants, protozoans, and vertebrates. It is the only order in the class Ellioviricetes. The name Bunyavirales derives from Bunyamwera, where the original type species Bunyamwera orthobunyavirus was first discovered. Ellioviricetes is named in honor of late virologist Richard M. Elliott for his early work on bunyaviruses.

Playa de Oro virus (OROV) is a probable species of orthohantavirus found in the rodents Oryzomys couesi and Sigmodon mascotensis in the Mexican state of Colima. The former is thought to be the main host. The sequences of parts of the virus's RNA-based genome have been determined; they differ by 7–10% in amino acid composition and 22–24% in nucleotide composition from closely related viruses.

Bayou orthohantavirus (BAYV) is a species of Orthohantavirus comprising enveloped and spherical viruses. It was first identified in 1993 in Louisiana and later confirmed by other investigators. BAYV was recognized as a distinct form of hantavirus disease, now known as hantavirus pulmonary syndrome (HPS). It now represents the second most common hantavirus in the United States behind the Sin Nombre orthohantavirus[]. In 1996, the marsh rice rat, which is seen in marshes in the southeast and mountain streams in the northeast, was identified as the natural reservoir of the virus. Due to the virus being first identified in Louisiana, this indicated the virus to be widespread throughout the Southeastern United States. This hantavirus disease is known as a severe and sometimes fatal respiratory disease, and HPS has a case-rate fatality of almost 50%.

Sangassou orthohantavirus(SANGV) is single-stranded, negative-sense RNA virus species of the genus Orthohantavirus in the Bunyavirales order. It was first isolated in an African wood mouse (Hylomyscus simus) in the forest in Guinea, West Africa in 2010. It is named for the village near where the mouse was trapped. It is the first indigenous Murinae-associated African hantavirus to be discovered.

Dobrava-Belgrade virus (DOBV) is the main cause of hemorrhagic fever with renal syndrome (HFRS) in southern Europe. In its natural reservoirs, DOBV causes a persistent, asymptomatic infection and is spread through excretions, fighting, and grooming. Humans can become infected by inhaling aerosols that contain rodent saliva, urine, or feces, as well as through bites and scratches. In humans, infection causes such as fever and headache, as well as the appearance of spots on the skin and renal symptoms such as kidney swelling, excess protein in urine, blood in urine, decreased urine production, and kidney failure. Acute respiratory distress syndrome occurs in about 10% of cases.

Soochong virus (SOOV) is a zoonotic negative sense single-stranded RNA virus. It may be a member of the genus Orthohantavirus, but it has not be definitively classified as a species and may only be a strain. It is one of four rodent-borne Hantaviruses found in the Republic of Korea. It is the etiologic agent for Hantavirus hemorrhagic fever with renal syndrome (HFRS). The other species responsible for HFRS in Korea are Seoul virus, Haantan virus, and Muju virus.

Muju virus(MUV) is a zoonotic negative-sense single-stranded RNA virus of the genus Orthohantavirus. It is a member virus of Puumala orthohantavirus. It is one of four rodent-borne Hantaviruses found in the Republic of Korea. It is the etiologic agent for Hantavirus hemorrhagic fever with renal syndrome (HFRS). The other species responsible for HFRS in Korea are Seoul orthohantavirus, Hantaan orthohantavirus, and Soochong virus.

Magboi virus (MGBV) is a novel, bat-borne Orthohantavirus discovered in a slit-faced bat trapped near the Magboi Stream in eastern Sierra Leone in 2011. It is a single-stranded, negative sense, RNA virus in the Bunyavirales order.

Monongahela virus (MGLV) is a single-stranded, negative-sense Orthohantavirus virus of zoonotic origin that causes hantavirus pulmonary syndrome.

Limestone Canyon virus (LSC) is a single-stranded, negative-sense RNA zoonotic Orthohantavirus that is genetically similar to Sin Nombre orthohantavirus which causes Hantavirus pulmonary syndrome (HPS) in humans. HPS causing hantaviruses are found only in the United States and South America.

Thottopalayam thottimvirus, formerly Thottapalayam virus, (TMPV) is single-stranded, enveloped, negative-sense RNA virus species of the genus Thottimvirus in the Bunyavirales order. It is the first hantavirus to be isolated from a shrew. It was discovered in India in 1964.

Topografov virus is an enveloped, negative-sense RNA virus of the genus Orthohantavirus in the Bunyavirales order. It is the first hantavirus to be isolated from Siberian lemmings found near the Topografov River in the Taymyr Peninsula, Siberia.

Imjin thottimvirus(MJNV) is a single-stranded, enveloped, negative-sense RNA virus of the orthohantavirus genus in the Bunyavirales order. It is a newly identified hantavirus isolated from the lung tissues of Ussuri white-toothed shrews of the species Crocidura lasiura (order Soricomorpha, family Soricidae, subfamily Crocidurinae) captured near the demilitarized zone in the Republic of Korea during 2004 and 2005.

Nova virus is a single-stranded, negative-sense, enveloped RNA virus with a trisegmented genome. It belongs to one of the most divergent lineages of the hantavirus group, which consists of zoonotic viruses belonging to the family Bunyaviridae. As of now, no human cases of infection have been reported.

Rockport virus (RKPV) is a single-stranded, enveloped, negative-sense RNA orthohantavirus.

Oxbow virus(OXBV) is a single-stranded, enveloped, negative-sense RNA orthohantavirus.

Thailand virus (THAIV) is a single-stranded, enveloped, negative-sense RNA orthohantavirus.

Serang virus(SERV) is a single-stranded, negative-sense, enveloped, novel RNA orthohantavirus.

References

  1. 1 2 3 4 5 Arai S, Ohdachi SD, Asakawa M, Kang HJ, Mocz G, Arikawa J, Okabe N, Yanagihara R.Molecular phylogeny of a newfound hantavirus in the Japanese shrew mole (Urotrichus talpoides).Proc Natl Acad Sci U S A.2008 Oct 21;105(42):16296–301.
  2. Morand, Serge; Beaudeau, François; Cabaret, Jacques (2011-09-08). New Frontiers of Molecular Epidemiology of Infectious Diseases. Springer Science & Business Media. ISBN   9789400721142.
  3. Bennett, Shannon N., Laurie Diznie, Laarni Sumibcay, Satoru Arai, Luis A. Ruedas, Jin-Won Song, and Richard Yanagihara. "Host Switch during Evolution of a Genetically Distinct Hantavirus in the American Shrew Mole (Neurotrichus Gibbsii)." Virology. By Hi Ji Kang. 1st ed. Vol. 388. N.p.: n.p., 2009. 8-14. Print.