ARL13B

Last updated
ARL13B
Identifiers
Aliases ARL13B , ARL2L1, JBTS8, ADP ribosylation factor like GTPase 13B
External IDs OMIM: 608922 MGI: 1915396 HomoloGene: 18820 GeneCards: ARL13B
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_001174150
NM_001174151
NM_144996
NM_182896
NM_001321328

Contents

NM_026577

RefSeq (protein)

NP_001167621
NP_001167622
NP_001308257
NP_659433
NP_878899

NP_080853

Location (UCSC) Chr 3: 93.98 – 94.06 Mb Chr 16: 62.79 – 62.85 Mb
PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

ADP-ribosylation factor-like protein 13B (ARL13B), also known as ADP-ribosylation factor-like protein 2-like 1, is a protein that in humans is encoded by the ARL13B gene. [5] [6]

Function

This gene encodes a member of the ADP-ribosylation factor-like family. The encoded protein is a small GTPase that contains both N-terminal and C-terminal guanine nucleotide-binding motifs. This protein is localized in the cilia [7] [8] and plays a role in cilia formation and in maintenance of cilia. [5]

Clinical significance

Mutations in the ARL13B gene are associated with the Joubert syndrome. [6]

Related Research Articles

Joubert syndrome Medical condition

Joubert syndrome is a rare autosomal recessive genetic disorder that affects the cerebellum, an area of the brain that controls balance and coordination.

ARFGAP1

ADP-ribosylation factor GTPase-activating protein 1 is an enzyme that in humans is encoded by the ARFGAP1 gene. Two transcript variants encoding different isoforms have been found for this gene.

AHI1

The Abelson helper integration site 1 (AHI1) is a protein coding gene that is known for the critical role it plays in brain development. Proper cerebellar and cortical development in the human brain depends heavily on AHI1. The AHI1 gene is prominently expressed in the embryonic hindbrain and forebrain. AHI1 specifically encodes the Jouberin protein and mutations in the expression of the gene is known to cause specific forms of Joubert syndrome. Joubert syndrome is autosomal recessive and is characterized by the brain malformations and mental retardation that AHI1 mutations have the potential to induce. AHI1 has also been associated with schizophrenia and autism due to the role it plays in brain development. An AHI1 heterozygous knockout mouse model was studied by Bernard Lerer and his group at Hadassah Medical Center in Jerusalem to elucidate the correlation between alterations in AHI1 expression and the pathogenesis of neuropsychiatric disorders. The core temperatures and corticosterone secretions of the heterozygous knockout mice after exposure to environmental and visceral stress exhibited extreme repression of autonomic nervous system and hypothalamic-pituitary-adrenal responses. The knockout mice demonstrated an increased resilience to different types of stress and these results lead to a correlation between emotional regulation and neuropsychiatric disorders.

CEP290

Centrosomal protein of 290 kDa is a protein that in humans is encoded by the CEP290 gene. CEP290 is located on the Q arm of chromosome 12.

GOLGA4

Golgin subfamily A member 4 is a protein that in humans is encoded by the GOLGA4 gene.

Uncoordinated-119 (Unc-119)

Uncoordinated-119 (Unc-119) is a protein that has been identified in C. elegans, humans, mice, zebrafish, rabbits, pig, calf, monkey, and protozoa. They have been classified in the GMP phophodiesterase, delta superfamily. Unc-119 proteins are categorized into their own family but are shown to be ancestrally related to PrBP and rhoGDI. It has been given many different names: Retinal Protein 4, HRG4, POC7 Centriolar Protein Homolog A, IMD13, POC7A, and RG4. 

ARF4

ADP-ribosylation factor 4 is a protein that in humans is encoded by the ARF4 gene.

ARL3

ADP-ribosylation factor-like protein 3 is a protein that in humans is encoded by the ARL3 gene.

ARL1

ADP-ribosylation factor-like protein 1 is a protein that in humans is encoded by the ARL1 gene.

INVS

Inversin is a protein that in humans is encoded by the INVS gene.

ARL2

ADP-ribosylation factor-like protein 2 is a protein that in humans is encoded by the ARL2 gene.

ARL6 Mammalian protein found in Homo sapiens

ADP-ribosylation factor-like protein 6 is a protein that in humans is encoded by the ARL6 gene.

DDEF2

Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 is a protein that in humans is encoded by the ASAP2 gene.

ARFRP1

ADP-ribosylation factor-related protein 1 is a protein that in humans is encoded by the ARFRP1 gene.

ARL4D

ADP-ribosylation factor-like protein 4D is a protein that in humans is encoded by the ARL4D gene.

ARL8B

ADP-ribosylation factor-like protein 8B is a protein that in humans is encoded by the ARL8B gene.

TTC8

Tetratricopeptide repeat domain 8 (TTC8) also known as Bardet–Biedl syndrome 8 is a protein that in humans is encoded by the TTC8 gene.

CC2D2A

Coiled-coil and C2 domain-containing protein 2A that in humans is encoded by the CC2D2A gene.

TMEM216

Transmembrane protein 216 is a protein in humans that is encoded by the TMEM216 gene.

ARHGAP31

The Rho GTPase activating protein 31 is encoded in humans by the ARHGAP31 gene. It is a Cdc42/Rac1 GTPase regulator.

References

  1. 1 2 3 GRCh38: Ensembl release 89: ENSG00000169379 - Ensembl, May 2017
  2. 1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000022911 - Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. 1 2 "Entrez Gene: ADP-ribosylation factor-like 13B".
  6. 1 2 Cantagrel V, Silhavy JL, Bielas SL, Swistun D, Marsh SE, Bertrand JY, Audollent S, Attié-Bitach T, Holden KR, Dobyns WB, Traver D, Al-Gazali L, Ali BR, Lindner TH, Caspary T, Otto EA, Hildebrandt F, Glass IA, Logan CV, Johnson CA, Bennett C, Brancati F, Valente EM, Woods CG, Gleeson JG (August 2008). "Mutations in the cilia gene ARL13B lead to the classical form of Joubert syndrome". Am. J. Hum. Genet. 83 (2): 170–9. doi:10.1016/j.ajhg.2008.06.023. PMC   2495072 . PMID   18674751.
  7. Delling, M.; Decaen, P. G.; Doerner, J. F.; Febvay, S.; Clapham, D. E. (2013). "Primary cilia are specialized calcium signalling organelles". Nature. 504 (7479): 311–314. Bibcode:2013Natur.504..311D. doi:10.1038/nature12833. PMC   4112737 . PMID   24336288.
  8. Decaen, P. G.; Delling, M.; Vien, T. N.; Clapham, D. E. (2013). "Direct recording and molecular identification of the calcium channel of primary cilia". Nature. 504 (7479): 315–318. Bibcode:2013Natur.504..315D. doi:10.1038/nature12832. PMC   4073646 . PMID   24336289.

Further reading

This article incorporates text from the United States National Library of Medicine, which is in the public domain.