RP1

Last updated
RP1
Identifiers
Aliases RP1 , DCDC4A, Oretinitis pigmentosa 1 (autosomal dominant), axonemal microtubule associated, RP1 axonemal microtubule associated
External IDs OMIM: 603937 MGI: 1341105 HomoloGene: 4564 GeneCards: RP1
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_006269

NM_001195662
NM_011283
NM_001370921

RefSeq (protein)

NP_006260
NP_001362583

NP_001182591
NP_035413
NP_001357850

Location (UCSC) Chr 8: 54.51 – 54.87 Mb Chr 1: 4.07 – 4.48 Mb
PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Oxygen-regulated protein 1 also known as retinitis pigmentosa 1 protein (RP1) is a protein that in humans is encoded by the RP1 gene. [5] [6]

Contents

Function

This gene encodes a member of the doublecortin family. The protein encoded by this gene contains two doublecortin domains that bind to microtubules and regulate microtubule polymerization. The encoded protein is a protein associated with the photoreceptor cell microtubules in the retina and is necessary for the correct stacking of outer segment disc. This protein and another retinal-specific protein, RP1L1, play essential and synergistic roles in affecting photosensitivity and outer segment morphogenesis of rod photoreceptor cells. [6]

History

Initially named "ORP1" for its response to in vivo retinal oxygen levels (designated ORP1 for 'oxygen-regulated protein-1'), this gene was subsequently linked to autosomal dominant retinitis pigmentosa and was renamed RP1 for 'retinitis pigmentosa 1'.

Clinical significance

Mutations in this gene cause autosomal dominant or autosomal recessive retinitis pigmentosa. [7] [8] [9] [10] [11] Transcript variants produced by alternative promoters and alternative splicing have been discovered that overlap with the current reference sequence and have multiple exons upstream and downstream of the current reference sequence. However, as of 2010, it is currently impossible to determine the biological effectiveness and full-length nature of certain variants. [6]

See also

Related Research Articles

<span class="mw-page-title-main">Retinitis pigmentosa</span> Gradual retinal degeneration leading to progressive sight loss

Retinitis pigmentosa (RP) is a genetic disorder of the eyes that causes loss of vision. Symptoms include trouble seeing at night and decreasing peripheral vision. As peripheral vision worsens, people may experience "tunnel vision". Complete blindness is uncommon. Onset of symptoms is generally gradual and often begins in childhood.

<span class="mw-page-title-main">Retinitis pigmentosa GTPase regulator</span> Protein-coding gene in the species Homo sapiens

X-linked retinitis pigmentosa GTPase regulator is a GTPase-binding protein that in humans is encoded by the RPGR gene. The gene is located on the X-chromosome and is commonly associated with X-linked retinitis pigmentosa (XLRP). In photoreceptor cells, RPGR is localized in the connecting cilium which connects the protein-synthesizing inner segment to the photosensitive outer segment and is involved in the modulation of cargo trafficked between the two segments.

<span class="mw-page-title-main">Peripherin 2</span> Protein-coding gene in the species Homo sapiens

Peripherin-2 is a protein, that in humans is encoded by the PRPH2 gene. Peripherin-2 is found in the rod and cone cells of the retina of the eye. Defects in this protein result in one form of retinitis pigmentosa, an incurable blindness.

<span class="mw-page-title-main">PRPF31</span> Protein-coding gene in the species Homo sapiens

PRP31 pre-mRNA processing factor 31 homolog , also known as PRPF31, is a protein which in humans is encoded by the PRPF31 gene.

<i>CRX</i> (gene) Protein-coding gene in the species Homo sapiens

Cone-rod homeobox protein is a protein that in humans is encoded by the CRX gene.

<span class="mw-page-title-main">RP2 (gene)</span> Protein-coding gene in humans

Protein XRP2 is a protein that in humans is encoded by the RP2 gene.

<span class="mw-page-title-main">PDE6B</span> Protein-coding gene in the species Homo sapiens

Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta is the beta subunit of the protein complex PDE6 that is encoded by the PDE6B gene. PDE6 is crucial in transmission and amplification of visual signal. The existence of this beta subunit is essential for normal PDE6 functioning. Mutations in this subunit are responsible for retinal degeneration such as retinitis pigmentosa or congenital stationary night blindness.

<span class="mw-page-title-main">CRB1</span> Protein-coding gene in the species Homo sapiens

Crumbs homolog 1 is a protein that in humans is encoded by the CRB1 gene.

<span class="mw-page-title-main">AIPL1</span> Protein-coding gene in the species Homo sapiens

Aryl-hydrocarbon-interacting protein-like 1 is a protein that in humans is encoded by the AIPL1 gene.

<span class="mw-page-title-main">TULP1</span> Protein-coding gene in the species Homo sapiens

Tubby-related protein 1 is a protein that in humans is encoded by the TULP1 gene.

<span class="mw-page-title-main">ROM1</span> Protein-coding gene in the species Homo sapiens

Rod outer segment membrane protein 1 is a protein that in humans is encoded by the ROM1 gene.

<span class="mw-page-title-main">CNGB1</span> Protein-coding gene in the species Homo sapiens

Cyclic nucleotide gated channel beta 1, also known as CNGB1, is a human gene encoding an ion channel protein.

<span class="mw-page-title-main">PDE6A</span> Protein-coding gene in the species Homo sapiens

Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha is an enzyme that in humans is encoded by the PDE6A gene.

<span class="mw-page-title-main">FSCN2</span> Protein-coding gene in the species Homo sapiens

Fascin-2 is a protein that in humans is encoded by the FSCN2 gene.

<span class="mw-page-title-main">CYP4V2</span> Protein-coding gene in the species Homo sapiens

Cytochrome P450 4V2 is a protein that in humans is encoded by the CYP4V2 gene.

<span class="mw-page-title-main">RP9</span> Protein-coding gene in humans

Retinitis pigmentosa 9 (autosomal dominant), also known as RP9 or PAP-1, is a protein which in humans is encoded by the RP9 gene.

<span class="mw-page-title-main">MFRP</span> Protein-coding gene in the species Homo sapiens

Membrane frizzled-related protein is a protein that in humans is encoded by the MFRP gene.

<span class="mw-page-title-main">IMPDH1</span> Protein-coding gene in the species Homo sapiens

Inosine-5'-monophosphate dehydrogenase 1, also known as IMP dehydrogenase 1, is an enzyme that in humans is encoded by the IMPDH1 gene.

<span class="mw-page-title-main">Retinal degeneration (rhodopsin mutation)</span> Retinopathy

Retinal degeneration is a retinopathy which consists in the deterioration of the retina caused by the progressive death of its cells. There are several reasons for retinal degeneration, including artery or vein occlusion, diabetic retinopathy, R.L.F./R.O.P., or disease. These may present in many different ways such as impaired vision, night blindness, retinal detachment, light sensitivity, tunnel vision, and loss of peripheral vision to total loss of vision. Of the retinal degenerative diseases retinitis pigmentosa (RP) is a very important example.

Occult macular dystrophy (OMD) is a rare inherited degradation of the retina, characterized by progressive loss of function in the most sensitive part of the central retina (macula), the location of the highest concentration of light-sensitive cells (photoreceptors) but presenting no visible abnormality. "Occult" refers to the degradation in the fundus being difficult to discern. The disorder is called "dystrophy" instead of "degradation" to distinguish its genetic origin from other causes, such as age. OMD was first reported by Y. Miyake et al. in 1989.

References

  1. 1 2 3 GRCh38: Ensembl release 89: ENSG00000104237 - Ensembl, May 2017
  2. 1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000025900 - Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. Blanton SH, Heckenlively JR, Cottingham AW, Friedman J, Sadler LA, Wagner M, et al. (Mar 1992). "Linkage mapping of autosomal dominant retinitis pigmentosa (RP1) to the pericentric region of human chromosome 8". Genomics. 11 (4): 857–69. doi:10.1016/0888-7543(91)90008-3. PMID   1783394.
  6. 1 2 3 "RP1 axonemal microtubule associated". Archived from the original on 2021-01-17. Retrieved 2020-09-25.
  7. Georgiou M, Grewal PS, Narayan A, Alser M, Ali N, Fujinami K, et al. (August 2020). "Sector Retinitis Pigmentosa: Extending the Molecular Genetics Basis and Elucidating the Natural History". American Journal of Ophthalmology. 221: 299–310. doi: 10.1016/j.ajo.2020.08.004 . PMC   7772805 . PMID   32795431.
  8. Ueno S, Koyanagi Y, Kominami T, Ito Y, Kawano K, Nishiguchi KM, et al. (September 2020). "Clinical characteristics and high resolution retinal imaging of retinitis pigmentosa caused by RP1 gene variants" (PDF). Japanese Journal of Ophthalmology. 64 (5): 485–496. doi:10.1007/s10384-020-00752-1. PMID   32627106. S2CID   220351273. Archived (PDF) from the original on 2022-05-19. Retrieved 2022-06-11.
  9. Daiger SP, Sullivan LS, Bowne SJ, Kennan A, Humphries P, Birch DG, et al. (2003). "Identification of the RP1 and RP10 (IMPDH1) Genes Causing Autosomal Dominant RP". Retinal Degenerations. Advances in Experimental Medicine and Biology. Vol. 533. pp. 1–11. doi:10.1007/978-1-4615-0067-4_1. ISBN   978-1-4613-4909-9. PMC   2583078 . PMID   15180241.
  10. Daiger SP, Shankar SP, Schindler AB, Sullivan LS, Bowne SJ, King TM, et al. (2006). "Genetic factors modifying clinical expression of autosomal dominant RP". Retinal Degenerative Diseases. Advances in Experimental Medicine and Biology. Vol. 572. pp. 3–8. doi:10.1007/0-387-32442-9_1. ISBN   978-0-387-28464-4. PMC   2581449 . PMID   17249547.
  11. Wang DY, Chan WM, Tam PO, Baum L, Lam DS, Chong KK, et al. (January 2005). "Gene mutations in retinitis pigmentosa and their clinical implications". Clinica Chimica Acta; International Journal of Clinical Chemistry. 351 (1–2): 5–16. doi:10.1016/j.cccn.2004.08.004. PMID   15563868.

Further reading