HLA-B13

Last updated
major histocompatibility complex (human), class I, B13
AllelesB*1301, *1302
Structure (See HLA-B)
Symbol(s) HLA-B
EBI-HLA B*1301
EBI-HLA B*1302
Locus chr.6 6p21.31

HLA-B13 (B13) is an HLA-B serotype. The serotype identifies the more common HLA-B*13 gene products. [1] (For terminology help see: HLA-serotype tutorial)

Contents

Serotype

B13 serotype recognition of Some HLA B*13 allele-group gene products [2]
B*13B13Sample
allele % %size (N)
130197238
1302991307

Allele frequencies

HLA B*1301 frequencies
freq
ref.Population(%)
[3] Papua New Guinea Wosera28.3
Australian Aborigine Cape York Peninsula27.0
Taiwan Bunun26.7
Australian Aborigine Groote Eylandt23.3
Taiwan Thao21.7
Taiwan Tsou17.6
India Khandesh Pawra12.0
China South Han8.2
New Caledonia7.7
South Africa Natal Tamil6.1
Philippines Ivatan6.0
Papua New Guinea Eastern Highlands Goroka5.7
Singapore Riau Malay5.4
China North Han4.8
Thailand4.1
India West Coast Parsis3.0
India North Hindus2.9
Jordan Amman2.1
South Korea (3)2.1
Thailand2.1
China Inner Mongolia2.0
France South East1.9
Georgia Tbilisi Kurds1.7
Japan Central1.5
India Andhra Pradesh Golla1.4
India North Delhi1.1
[3] B*1302
India West Coast Parsis16.0
Cameroon Bakola Pygmy7.0
Czech Republic6.6
Georgia Svaneti Svans6.3
Georgia Tbilisi Georgians5.6
India Mumbai Marathas4.3
Romanian4.1
India West Bhils4.0
China North Han3.8
Sudanese3.8
South Korea pop 33.5
Georgia Tbilisi Kurds3.4
Russia Tuva pop 23.3
Israel Arab Druse3.0
Central Africa Republic Mbenzele Pygmy2.8
Israel Ashkenazi and Non Ashkenazi Jews2.8
Uganda Kampala2.8
Bulgaria2.7
Cameroon Yaounde2.7
Guinea Bissau2.3
Kenya Nandi2.3
India North Delhi2.2
Zimbabwe Harare Shona2.2
Kenya2.1
Croatia2.0
Cameroon Bamileke1.9
USA North American Natives1.9
China South Han1.8
Finland1.7
Belgium1.5
South African Natal Zulu1.5
Tunisia1.5
India Andhra Pradesh Golla1.4
Azores Santa Maria and Sao Miguel1.3
Ireland South1.2
Singapore Chinese Han1.2
Kenya Luo1.1
Mexico Chihuahua State Tarahumara1.1
Tunisia Tunis1.1
Zambia Lusaka1.1
Portugal Centre1.0
Saudi Arabia Guraiat and Hail1.0
Singapore Javanese Indonesians1.0

Related Research Articles

<span class="mw-page-title-main">HLA-B*82</span>

HLA-B*82 (B*82) is an HLA-B allele-group. There is no current useful serotyping for HLA-B*82 gene products. B*8201 was first identified by sequence analysis and appears to be derived by gene conversion between B*5602 and another HLA class I allele., later B*8202 was identified in a caucasian and was suggested to be ancestral to B*8201, as product between gene conversion of B*5602 allele and B*4501 allele. B*82 is more common in East Africa, Kenya and Sudan, the frequency of B*8201 is found in the peoples to the west, sporadically in Central and West Africa, B*8202 is found in Sudan and Saudi Arabia.

<span class="mw-page-title-main">HLA-B81</span> Human leukocyte antigen serotype

HLA-B81 (B81) is an HLA–B serotype. The serotype identifies the HLA-B*8101 and B*8102 gene products. B81 is more common in Subsaharan Africa. While there is a B81 serotype, serotyping of B81 is poor when simultaneously tested with anti-B7 or B48 antibodies.

HLA-B78 (B78) is an HLA-B serotype. The serotype identifies the more common HLA-B*78 gene products. B78 is more common in West and North Africa, but is also scattered at low frequencies in parts of Asia.

HLA-B73 (B73) is an HLA-B serotype. The serotype identifies the HLA-B*7301 gene product. Part of B*7301 is similar to the HLA-B22 family, however part resembles the domains seen in other apes. B73 is more common in Western Indian Ocean, Mediterranean and Africa.

HLA-B67 (B67) is an HLA-B serotype. The serotype identifies the more common HLA-B*67 gene products. B67 is region specific recombinant haplotype formed by the gene conversion of B*39, an allele common along the Northwest Pacific Rim, and B7, B22, or B27.

HLA-B59 (B59) is an HLA-B serotype. The serotype identifies the more common HLA-B*## gene products. B59 is a hybrid between B*55 and B*51. B59 is more common in Japan, Korea, N. China and Mongolia.

HLA-B47 (B47) is an HLA–B serotype. The serotype identifies the HLA-B*47 gene products. Comparison of B47 nucleotide sequence with other HLA-B sequences shows a segment of 228 bp identical with B44 in the alpha 1 domain and a segment of 218 bp identical with B27 in the alpha 2 domain, but only a 91 bp segment of identity with B13 in the alpha 1 domain. The complex pattern of substitutions and their degree of divergence indicate that HLA-B13 and HLA-Bw47 alleles are not related by a simple mutational event. B47 is linked to a gene that causes adrenal deficiency. B47 is generally low in frequency and with highest known frequencies in Central and Western Africa.

HLA-B42 (B42) is an HLA-B serotype. The serotype identifies the HLA-B*4201 and *4202 gene products. HLA-B*4201 is common in Central Africa.

HLA-B41 (B41) is an HLA-B serotype. The serotype identifies HLA-B*4101, *4102, *4103 gene products.

HLA-B37 (B37) is an HLA-B serotype. The serotype identifies the more common HLA-B*37 gene products.

HLA-B18 (B18) is an HLA-B serotype. The serotype identifies the more common HLA-B*18 gene products. B*1801, the most common allele is at highest frequencies in Northern Italy and the Balkans, a peak frequency distribution it shares with B*3501.

<span class="mw-page-title-main">HLA-B8</span> Human leukocyte antigen serotype

HLA-B8 (B8) is an HLA-B serotype. The serotype identifies the HLA-B*08 gene products. HLA-B8, previously known as HL-A8 was one of the first identified of the HLA antigens. It coined the "Super B8" haplotype, also called the ancestral European haplotype because of its common occurrence in Europe, particular the isles and Scandinavia. B8 is a component gene-allele of the AH8.1 haplotype in Northern and Western Europeans. Genes between B8 and DR3 on this haplotype are frequently associated with autoimmune disease.

HLA-B56 (B56) is an HLA-B serotype. B56 is a split antigen from the B22 broad antigen, sister serotypes are B54 and B55. The serotype identifies the more common HLA-B*56 gene products.

HLA-B55 (B55) is an HLA-B serotype. B55 is a split antigen from the B22 broad antigen, sister serotypes are B54 and B56. The serotype identifies the more common HLA-B*55 gene products.

HLA-B54 (B54) is an HLA-B serotype. B54 is a split antigen from the B22 broad antigen, sister serotypes are B55 and B56. The serotype identifies the more common HLA-B*55 gene products.

HLA-B50 (B50) is an HLA-B serotype. B50 is a split antigen from the B21 broad antigen, the sister serotype B49. The serotype identifies the more common HLA-B*50 gene products.

HLA-B49 (B49) is an HLA-B serotype. B49 is a split antigen from the B21 broad antigen, the sister serotype B50. The serotype identifies the more common HLA-B*50 gene products.

<span class="mw-page-title-main">HLA-B70</span> Human leukocyte antigen serotype

HLA-B70 (B70) is an HLA-B serotype. The serotype identifies certain B*15 gene-allele protein products of HLA-B. B70 is one of many split antigens of the broad antigen, B15.

<span class="mw-page-title-main">HLA-B63</span> Human leukocyte antigen serotype

HLA-B63 (B63) is an HLA-B serotype. The serotype identifies certain B*15 gene-allele protein products of HLA-B.

<span class="mw-page-title-main">HLA-B62</span> Human leukocyte antigen serotype

HLA-B62 (B62) is an HLA-B serotype. The serotype identifies certain B*15 gene-allele protein products of HLA-B.

References

  1. Marsh, S. G.; Albert, E. D.; Bodmer, W. F.; Bontrop, R. E.; Dupont, B.; Erlich, H. A.; Fernández-Viña, M.; Geraghty, D. E.; Holdsworth, R.; Hurley, C. K.; Lau, M.; Lee, K. W.; Mach, B.; Maiers, M.; Mayr, W. R.; Müller, C. R.; Parham, P.; Petersdorf, E. W.; Sasazuki, T.; Strominger, J. L.; Svejgaard, A.; Terasaki, P. I.; Tiercy, J. M.; Trowsdale, J. (2010). "Nomenclature for factors of the HLA system, 2010". Tissue Antigens. 75 (4): 291–455. doi:10.1111/j.1399-0039.2010.01466.x. PMC   2848993 . PMID   20356336.
  2. derived from IMGT/HLA
  3. 1 2 Middleton D, Menchaca L, Rood H, Komerofsky R (2003). "New allele frequency database". Tissue Antigens. 61 (5): 403–7. doi: 10.1034/j.1399-0039.2003.00062.x . PMID   12753660.