L-arabinose isomerase | |||||||||
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![]() L-arabinose isomerase hexamer, Geobacillus kaustophilus | |||||||||
Identifiers | |||||||||
EC no. | 5.3.1.4 | ||||||||
CAS no. | 9023-80-7 | ||||||||
Databases | |||||||||
IntEnz | IntEnz view | ||||||||
BRENDA | BRENDA entry | ||||||||
ExPASy | NiceZyme view | ||||||||
KEGG | KEGG entry | ||||||||
MetaCyc | metabolic pathway | ||||||||
PRIAM | profile | ||||||||
PDB structures | RCSB PDB PDBe PDBsum | ||||||||
Gene Ontology | AmiGO / QuickGO | ||||||||
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Arabinose isomerase | |||||||||
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![]() crystal structure of l-arabinose isomerase from e.coli | |||||||||
Identifiers | |||||||||
Symbol | Arabinose_Isome | ||||||||
Pfam | PF02610 | ||||||||
InterPro | IPR003762 | ||||||||
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In enzymology, a L-arabinose isomerase (EC 5.3.1.4) is an enzyme that catalyzes the chemical reaction
Hence, this enzyme has one substrate, L-arabinose, and one product, L-ribulose.
This enzyme belongs to the family of isomerases, specifically those intramolecular oxidoreductases interconverting aldoses and ketoses. The systematic name of this enzyme class is L-arabinose aldose-ketose-isomerase. This enzyme participates in pentose and glucuronate interconversions.
This enzyme catalyses the conversion of L-arabinose to L-ribulose as the first step in the pathway of L-arabinose utilization as a carbon source. [1]
As of late 2007, two structures have been solved for this class of enzymes, with PDB accession codes 2AJT and 2HXG.
In biochemistry, isomerases are a general class of enzymes that convert a molecule from one isomer to another. Isomerases facilitate intramolecular rearrangements in which bonds are broken and formed. The general form of such a reaction is as follows:
A heptose is a monosaccharide with seven carbon atoms.
Ribulose is a ketopentose — a monosaccharide containing five carbon atoms, and including a ketone functional group. It has chemical formula C5H10O5. Two enantiomers are possible, d-ribulose and l-ribulose. d-Ribulose is the diastereomer of d-xylulose.
Phosphopentose epimerase encoded by the RPE gene is a metalloprotein that catalyzes the interconversion between D-ribulose 5-phosphate and D-xylulose 5-phosphate.
In enzymology, a L-arabinitol 2-dehydrogenase (EC 1.1.1.13) is an enzyme that catalyzes the chemical reaction
In enzymology, a 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase is an enzyme that catalyzes the chemical reaction
In enzymology, an arabinose-5-phosphate isomerase is an enzyme that catalyzes the chemical reaction
In enzymology, an arabinose isomerase is an enzyme that catalyzes the chemical reaction
In enzymology, a D-lyxose ketol-isomerase is an enzyme that catalyzes the chemical reaction
In enzymology, a glucuronate isomerase is an enzyme that catalyzes the chemical reaction
In enzymology, a hydroxypyruvate isomerase is an enzyme that catalyzes the chemical reaction
In enzymology, a L-fucose isomerase is an enzyme that catalyzes the chemical reaction
In enzymology, a L-rhamnose isomerase is an enzyme that catalyzes the chemical reaction
In enzymology, a L-ribulose-5-phosphate 4-epimerase is an enzyme that catalyzes the interconversion of ribulose 5-phosphate and xylulose 5-phosphate in the oxidative phase of the Pentose phosphate pathway.
In enzymology, a phosphoribosylanthranilate isomerase (PRAI) is an enzyme that catalyzes the third step of the synthesis of the amino acid tryptophan.
Ribose-5-phosphate isomerase (Rpi) encoded by the RPIA gene is an enzyme that catalyzes the conversion between ribose-5-phosphate (R5P) and ribulose-5-phosphate (Ru5P). It is a member of a larger class of isomerases which catalyze the interconversion of chemical isomers. It plays a vital role in biochemical metabolism in both the pentose phosphate pathway and the Calvin cycle. The systematic name of this enzyme class is D-ribose-5-phosphate aldose-ketose-isomerase.
In enzymology, a ribose isomerase is an enzyme that catalyzes the chemical reaction
In enzymology, a S-methyl-5-thioribose-1-phosphate isomerase is an enzyme that catalyzes the chemical reaction
In enzymology, a ribulokinase is an enzyme that catalyzes the chemical reaction
In enzymology, a xylose isomerase is an enzyme that catalyzes the interconversion of D-xylose and D-xylulose. This enzyme belongs to the family of isomerases, specifically those intramolecular oxidoreductases interconverting aldoses and ketoses. The isomerase has now been observed in nearly a hundred species of bacteria. Xylose-isomerases are also commonly called fructose-isomerases due to their ability to interconvert glucose and fructose. The systematic name of this enzyme class is D-xylose aldose-ketose-isomerase. Other names in common use include D-xylose isomerase, D-xylose ketoisomerase, and D-xylose ketol-isomerase.