SUMF1

Last updated
SUMF1
Protein SUMF1 PDB 1y1e.png
Available structures
PDB Ortholog search: PDBe RCSB
Identifiers
Aliases SUMF1 , AAPA3037, FGE, UNQ3037, sulfatase modifying factor 1
External IDs OMIM: 607939; MGI: 1889844; HomoloGene: 16268; GeneCards: SUMF1; OMA:SUMF1 - orthologs
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_001164674
NM_001164675
NM_182760

NM_145937

RefSeq (protein)

NP_001158146
NP_001158147
NP_877437

NP_666049

Location (UCSC) Chr 3: 3.7 – 4.47 Mb Chr 6: 108.08 – 108.16 Mb
PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Sulfatase-modifying factor 1 is an enzyme that in humans is encoded by the SUMF1 gene. [5] [6] [7]

Sulfatases catalyze the hydrolysis of sulfate esters such as glycosaminoglycans, sulfolipids, and steroid sulfates. C-alpha-formylglycine (FGly), the catalytic residue in the active site of eukaryotic sulfatases, is posttranslationally generated from a cysteine by SUMF1, the human form of the aerobic Formylglycine-generating enzyme (FGE), in the endoplasmic reticulum (ER). The genetic defect of FGly formation caused by mutations in the SUMF1 gene results in inactive FGE, and subsequently multiple sulfatase deficiency (MSD; MIM 272200), a lysosomal storage disorder (Roeser et al., 2006).[supplied by OMIM] [7]

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An aldehyde tag is a short peptide tag that can be further modified to add fluorophores, glycans, PEG chains, or reactive groups for further synthesis. A short, genetically-encoded peptide with a consensus sequence LCxPxR is introduced into fusion proteins, and by subsequent treatment with the formylglycine-generating enzyme (FGE), the cysteine of the tag is converted to a reactive aldehyde group. This electrophilic group can be targeted by an array of aldehyde-specific reagents, such as aminooxy- or hydrazide-functionalized compounds.

References

  1. 1 2 3 GRCh38: Ensembl release 89: ENSG00000144455 Ensembl, May 2017
  2. 1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000030101 Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. Dierks T, Schmidt B, Borissenko LV, Peng J, Preusser A, Mariappan M, von Figura K (May 2003). "Multiple sulfatase deficiency is caused by mutations in the gene encoding the human C(alpha)-formylglycine generating enzyme" (PDF). Cell. 113 (4): 435–444. doi: 10.1016/S0092-8674(03)00347-7 . PMID   12757705. S2CID   11571659.
  6. Cosma MP, Pepe S, Annunziata I, Newbold RF, Grompe M, Parenti G, Ballabio A (May 2003). "The multiple sulfatase deficiency gene encodes an essential and limiting factor for the activity of sulfatases". Cell. 113 (4): 445–456. doi: 10.1016/S0092-8674(03)00348-9 . PMID   12757706. S2CID   15095377.
  7. 1 2 "Entrez Gene: SUMF1 sulfatase modifying factor 1".

Further reading