Synchytrium | |
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Synchytrium (prob. S. papillatum ) infection of Erodium cicutarium at Lookout Mountain, Phoenix, Maricopa Co., Arizona, USA. | |
Scientific classification | |
Domain: | Eukaryota |
Kingdom: | Fungi |
Division: | Chytridiomycota |
Class: | Chytridiomycetes |
Order: | Chytridiales |
Family: | Synchytriaceae |
Genus: | Synchytrium de Bary and Woronin, 1863 |
Species | |
Synchytrium is a large genus of plant pathogens within the phylum Chytridiomycota. Species are commonly known as false rust or wart disease. Approximately 200 species are described, [1] and all are obligate parasites of angiosperms, ferns, or mosses. [2] Early species were mistakenly classified among the higher fungi (Ascomycota or Basidiomycota) because of their superficial similarity to the rust fungi. Anton de Bary and Mikhail S. Woronin recognized the true nature of these fungi and established the genus to accommodate Synchytrium taraxaci, which grows on dandelions, and S. succisae, which grows on Succisa pratensis . Synchytrium taraxaci is the type of the genus. The genus has been divided into 6 subgenera based on differences in life cycles. [1]
Members of Synchytrium are endobiotic, holocarpic, and inoperculate. This means Synchytrium species grow inside of the host cell (endobiotic), produce structures other than a zoosporangium (holocarpic), and do not release zoospores through a lid-like structure (inoperculate). [3] Zoospores of other members of Chytridiomycota typically give rise to one zoosorangium or a polycentric thallus capable of producing many zoosporangia. In Synchytrium, the zoospore nucleus divides many times with each daughter nucleus giving rise to a zoosporangium. This produces a cluster of clonal zoosporangia, often enveloped with a membrane. This cluster is called a sorus. The zoospore can give rise to the sorus directly or it can act as a prosorus. The difference is demonstrated in the life cycle, which is discussed below. [1]
Most species share the same initial developmental stages. The released zoospores swim until they find a suitable host and will occasionally use amoeboid movement to better orient themselves to a host plant cell. After the zoospore attaches to a host cell, a narrow germ tube forms and penetrates the host cell, which is usually an epidermal cell. An exception to this is S. minutum; it uses the stomata to enter the host plant and penetrate a sub-epidermal cell. After penetration, the zoospore cytoplasm flows into the host cell. The Synchytrium nucleus travels toward the host cell nucleus and becomes enveloped in host cytoplasm. After this point, differences arise among Synchytrium species. Species fall into one of two broad categories: short cycled and long cycled. Short cycled species follow one of two lines of development: sori, sporangia, zoospore or resting spore, sori, zoospore. Long cycled species follow a general pathway of prosori/sori, sporangia, zoospore, resting spore, prosori/sori, sporangia, zoospore. The nuances in life cycles are used to delineate the subgenera. [1]
Species in this subgenus are long cycled and begin as a uninucleate thallus that functions as a prosorus. Basically, the primary nucleus of the parasite grows within the host cytoplasm. At a point, it will produce a new germ tube and exits out of the envelope. It then divides numerous times with each daughter nucleus partitioned into a developing sporangium. An envelope forms around the cluster of sporangia and the cluster becomes a sorus. The sporangia release zoospores that infect other cells. These develop into resting spores that will overwinter. Upon germination, the resting spores function as prosori. [1] Karling included the genus Micromyces within this subgenus [1] while other authors do not. [2] [3]
Species in this subgenus develop in a similar fashion as those in subgenus Microsynchytrium, except that the resting spore functions as a sporangium during germination. In these species, the zoospores can develop into either a prosori, as in Microsynchytrium, or they can fuse to form a flagellated zygote. The zygote infects a host cell and becomes a resting spore. Synchytrium endobioticum is included in this subgenus. [1]
This subgenus is referred to as Synchytrium or Eusynchytrium. Species in this group do not form prosori. The sorus forms directly from the zoospore nucleus. Several generations can be produced during the spring and summer. Resting spores are developed in the fall and winter. Upon germination, the resting spore acts as a sporangium. The type, Synchytrium taraxaci, is placed in this subgenus. [1]
These species develop in a similar fashion as Eusynchytrium except that the resting spore acts as a prosorus upon germination. [1]
This subgenus is a "dumping ground" for species with incompletely known life cycles. It would seem that the primary nucleus forms a resting spore that acts as a prosorus upon germination. However, these species will need to be more closely examined for proper placement. [1]
Species in this group are short cycled. The zoospore nucleus forms a sorus. Resting spores are either unknown or truly absent. [1]
To date, sexual reproduction is only described in four species: Synchytrium endobioticum, S. fulgens, S. macroporosum, [1] and S. psophocarpi. [4]
Synchytrium species have been reported from various habitats, from the tropics to the arctic regions. Three species, S. lacunosum, S. potentille, and S. gei, are alpine in nature and have been reported to occur abundantly up to 11,500 feet. Synchytrium potentille zoospores have even been observed swimming in melted snow. [1]
Outbreaks of Synchytrium typically occur in moist environments, such as temporary swamps, frequently inundated meadows, and ditches. The environment of the host plant always determines the frequency and intensity of infection. Infection often occurs during the seedling stage and usually produces galls on the host plant. These galls can be the result of the infected cell enlarging or a combination of enlargement of the infected cell with the enlargement and division of neighboring cells. Infections are not usually destructive with the noted exceptions of Synchytrium endobioticum, S. vaccinii, S. sesamicola, S. oxalydis, S. geranii, and S. cookii. [1]
As in other members of Chytridiomycota, dispersal through the zoospore is limited to the immediate environment of the host cell. Long range dispersal can be achieved through other stages. For example, sporangia of Synchytrium psophcarpi can be transported 15 meters (49 feet) by the wind with maximum dispersal occurring in the afternoon. Sporangia can also be transported from plant to plant through rain splashing. [4] The resting spores of Synchytrium endobioticum have been found stuck to window panes of a building downwind of infected fields, and further study revealed the wind depositing resting spores at a rate of 1 spore/cm2/day. [5] Synchytrium resting spores can be long lived. For example, the resting spore of S. endobioticum remains viable for 30 or more years. [1] Other species are not quite as long. Synchytrium macroporosum resting spores are only viable for several years. [6] Typically, resting spores are the overwintering stage. However, in species that do not produce resting spores, other structures serve as the overwintering stage. For example, two species common to North America, Synchytrium decipiens and S. macroporosum, appear to overwinter as sori on vegetative material. [1]
In terms of hosts, the genus ranges from specific to broad. For example, Synchytrium decipiens and Syncytrium mercurialis are limited to a single host species. Synchytrium taraxaci is limited to the genus Taraxacum . Synchytrium fulgens is able to infect a variety of plants in the family Oenotheraceae. On the other extreme, Synchytrium macroporosum is able to infect 1300 species across 800 genera and 165 plant families. Synchytrium aureum is able to infect 186 species across 110 genera in 33 families. In the last two species, these infections occurred under greenhouse conditions and the life cycle was not always completed. [1]
Most species of Synchytrium infect wild plants and rarely affect human affairs. However, there are exceptions. [1] The most well-known species is Synchytrium endobioticum , a parasite of Solanaceae; it is the causal agent of black wart in potatoes. Synchytrium anemones can cause harm to anemone and thalictrum flowers. Synchytrium aureum infects many agricultural and horticultural plants. Synchytrium vaccinii creates galls on cranberry, azalea, chamaedaphne, gaultheira, and ledum. [7] Synchytrium fragariae infects strawberry plants. [8] Synchytrium trichosanthidis parasitizes an Indian curcubit, and S. sesamicola is responsible for losses in Indian crops of sesame (Sesamum indicum). [1] Synchytrium psophocarpi is one of the major diseases affecting winged bean (Psophocarpus tetragonolobus), which is important high protein crop. [4] Synchytrium pogostemonis is the casual agent of budok (which translates as wart in a local Indonesian language), a disease of Patchouli (Pogostemon cablin). [9] Synchytrium solstitiale parasitizes the yellow star thistle (Centaurea solstitialis), an important weed in the United States. For this reason, S. solstitiale is being considered as a biological control of the yellow star thistle in the United States. [10] Another species being considered for biological control use is Synchytrium minutum, which occasionally parasitizes kudzu. However, S. minutum parasitizes cultivated kudzu patches more often than wild patches and has also been reported from agricultural crops. [11]
Species in this group are distinguished from one another based on morphology of the various life cycle stages, differences in cytology, both the cytological reaction and gross reaction of the host plant to infection, and the host plant. However, similar to other members of Chytridiomycota, all of these features exhibit considerable variation and often overlap between species. It is possible that many species names refer to the same organism. In some cases, there is not enough variation, and it is possible that one name refers to a species complex. An example is Synchytrium aureum; as mentioned above, it is able to infect a broad range of hosts. However, cross inoculation experiments reveal that strains demonstrate considerable host range restrictions, which implies the presence of cryptic species. [1] A recent study using molecular characters placed Synchytrium endobioticum and two other species outside of Chytridiales. They were sister to the Lobulomycetales, which suggests the genus likely represents a distinct order within Chytridiomycota. However, the study did not contain S. taraxaci, the type, and so refrained from making taxonomic changes. [12] A more recent study has included the type along with those other species. So far, the genus is monophyletic as are several of the subgenera. Two subgenera were non-monophyletic: Pycnosynchytrium and Microsynchytrium. The study also found deep divergences and fast evolution rates in the genus, which is to be expected under Red Queen dynamics. [13]
In biology, a spore is a unit of sexual or asexual reproduction that may be adapted for dispersal and for survival, often for extended periods of time, in unfavourable conditions. Spores form part of the life cycles of many plants, algae, fungi and protozoa. They were thought to have appeared as early as the mid-late Ordovician period as an adaptation of early land plants.
A sporangium ; pl.: sporangia) is an enclosure in which spores are formed. It can be composed of a single cell or can be multicellular. Virtually all plants, fungi, and many other groups form sporangia at some point in their life cycle. Sporangia can produce spores by mitosis, but in land plants and many fungi, sporangia produce genetically distinct haploid spores by meiosis.
Chytridiomycota are a division of zoosporic organisms in the kingdom Fungi, informally known as chytrids. The name is derived from the Ancient Greek χυτρίδιον (khutrídion), meaning "little pot", describing the structure containing unreleased zoospores. Chytrids are one of the earliest diverging fungal lineages, and their membership in kingdom Fungi is demonstrated with chitin cell walls, a posterior whiplash flagellum, absorptive nutrition, use of glycogen as an energy storage compound, and synthesis of lysine by the α-amino adipic acid (AAA) pathway.
Synchytrium endobioticum is a chytrid fungus that causes the potato wart disease, or black scab. It also infects some other plants of the genus Solanum, though potato is the only cultivated host.
Peronosporaceae are a family of water moulds that contains 21 genera, comprising more than 600 species. Most of them are called downy mildews.
Phytophthora palmivora is an oomycete that causes bud-rot of palms, fruit-rot or kole-roga of coconut and areca nut. These are among the most serious diseases caused by fungi and moulds in South India. It occurs almost every year in Malnad, Mysore, North & South Kanara, Malabar and other areas. Similar diseases of palms are also known to occur in Sri Lanka, Mauritius, and Sumatra. The causative organism was first identified as P. palmivora by Edwin John Butler in 1917.
This is a glossary of some of the terms used in phytopathology.
Sporogenesis is the production of spores in biology. The term is also used to refer to the process of reproduction via spores. Reproductive spores were found to be formed in eukaryotic organisms, such as plants, algae and fungi, during their normal reproductive life cycle. Dormant spores are formed, for example by certain fungi and algae, primarily in response to unfavorable growing conditions. Most eukaryotic spores are haploid and form through cell division, though some types are diploid sor dikaryons and form through cell fusion.we can also say this type of reproduction as single pollination
Powdery scab is a disease of potato tubers. It is caused by the cercozoan Spongospora subterranea f. sp. subterranea and is widespread in potato growing countries. Symptoms of powdery scab include small lesions in the early stages of the disease, progressing to raised pustules containing a powdery mass. These can eventually rupture within the tuber periderm. The powdery pustules contain resting spores that release anisokont zoospores to infect the root hairs of potatoes or tomatoes. Powdery scab is a cosmetic defect on tubers, which can result in the rejection of these potatoes. Potatoes which have been infected can be peeled to remove the infected skin and the remaining inside of the potato can be cooked and eaten.
Pythium irregulare is a soil borne oomycete plant pathogen. Oomycetes, also known as "water molds", are fungal-like protists. They are fungal-like because of their similar life cycles, but differ in that the resting stage is diploid, they have coenocytic hyphae, a larger genome, cellulose in their cell walls instead of chitin, and contain zoospores and oospores.
Albugo is a genus of plant-parasitic oomycetes. Those are not true fungi (Eumycota), although many discussions of this organism still treat it as a fungus. The taxonomy of this genus is incomplete, but several species are plant pathogens. Albugo is one of three genera currently described in the family Albuginaceae, the taxonomy of many species is still in flux.
Rhizophydiales are an important group of chytrid fungi. They are found in soil as well as marine and fresh water habitats where they function as parasites and decomposers.
Blastocladiomycota is one of the currently recognized phyla within the kingdom Fungi. Blastocladiomycota was originally the order Blastocladiales within the phylum Chytridiomycota until molecular and zoospore ultrastructural characters were used to demonstrate it was not monophyletic with Chytridiomycota. The order was first erected by Petersen for a single genus, Blastocladia, which was originally considered a member of the oomycetes. Accordingly, members of Blastocladiomycota are often referred to colloquially as "chytrids." However, some feel "chytrid" should refer only to members of Chytridiomycota. Thus, members of Blastocladiomycota are commonly called "blastoclads" by mycologists. Alternatively, members of Blastocladiomycota, Chytridiomycota, and Neocallimastigomycota lumped together as the zoosporic true fungi. Blastocladiomycota contains 5 families and approximately 12 genera. This early diverging branch of kingdom Fungi is the first to exhibit alternation of generations. As well, two (once) popular model organisms—Allomyces macrogynus and Blastocladiella emersonii—belong to this phylum.
Ceratiomyxa is a genus of plasmodial slime mould within the Eumycetozoa, first described by Pier Antonio Micheli. They are widely distributed and commonly found on decaying wood.
Entorrhizomycetes is the sole class in the phylum Entorrhizomycota, within the Fungi subkingdom Dikarya along with Basidiomycota and Ascomycota. It contains three genera and is a small group of teliosporic root parasites that form galls on plants in the Juncaceae (rush) and Cyperaceae (sedge) families. Prior to 2015 this phylum was placed under the subdivision Ustilaginomycotina. A 2015 study did a "comprehensive five-gene analyses" of Entorrhiza and concluded that the former class Entorrhizomycetes is possibly either a close sister group to the rest of Dikarya or Basidiomycota.
Rozella is a fungal genus of obligate endoparasites of a variety of hosts, including Oomycota, Chytridiomycota, and Blastocladiomycota. Rozella was circumscribed by French mycologist Marie Maxime Cornu in 1872. Considered one of the earliest diverging lineages of fungi, the widespread genus contains 27 species, with the most well studied being Rozella allomycis. Rozella is a member of a large clade of fungi referred to as the Cryptomycota/Rozellomycota. While some can be maintained in dual culture with the host, most have not been cultured, but they have been detected, using molecular techniques, in soil samples, and in freshwater and marine ecosystems. Zoospores have been observed, along with cysts, and the cells of some species are attached to diatoms.
Parvilucifera is a genus of marine alveolates that behave as endoparasites of dinoflagellates. It was described in 1999 by biologists Fredrik Norén and Øjvind Moestrup, who identified the genus among collections of Dinophysis dinoflagellates off the coast of Sweden. Initially mistaken for products of sexual reproduction, the round bodies found within these collections were eventually recognized as sporangia, spherical structures that generate zoospores of a parasitic protist. This organism was later identified as P. infectans, the type species. The examination of this organism and its close genetic relationship to Perkinsus led to the creation of the Perkinsozoa phylum within the Alveolata group.
Allomyces is a genus of fungi in the family Blastocladiaceae. It was circumscribed by British mycologist Edwin John Butler in 1911. Species in the genus have a polycentric thallus and reproduce sexually or asexually by zoospores that have a whiplash-like flagella. They are mostly isolated from soils in tropical countries, commonly in ponds, rice fields, and slow-moving rivers.
Physoderma is a genus of chytrid fungi. Described by German botanist Karl Friedrich Wilhelm Wallroth in 1833, the genus contains some species that are parasitic on vascular plants, including P. alfalfae and P. maydis, causative agents of crown wart of alfalfa and brown spot of corn, respectively. Of the chytrid genera, Physoderma is the oldest. However, species were confused with the rust fungi, the genus Synchytrium, and the genus Protomyces of Ascomycota. Members of Physoderma are obligate parasites of pteridophytes and angiosperms. There are approximately 80 species within this genus.
Black rot on orchids is caused by Pythium and Phytophthora species. Black rot targets a variety of orchids but Cattleya orchids are especially susceptible. Pythium ultimum and Phytophthora cactorum are known to cause black rot in orchids.