Patricia Babbitt

Last updated
Patricia Babbitt
Born
Patricia Clement Babbitt
Education University of California, San Francisco (PhD)
Awards ISCB Fellow (2018) [1]
Scientific career
Fields Bioinformatics [2]
Computational biology [2]
Institutions University of California, San Francisco
Thesis Sequence determination, expression, and site-directed mutagenesis of creatine kinase  (1988)
Doctoral advisor George L. Kenyon [3]
Irwin Kuntz [3]
Website profiles.ucsf.edu/patricia.babbitt OOjs UI icon edit-ltr-progressive.svg

Patricia Clement Babbitt is a Professor and Principal Investigator (PI) in the school of pharmacy at the University of California, San Francisco (UCSF). [2] [4] [5] [6] [7] [8]

Contents

Education

Patricia Babbitt earned a PhD in pharmaceutical chemistry in 1988 from the University of California, San Francisco [3] [4] for research supervised by George L. Kenyon and Irwin Kuntz. [3]

Career and research

Babbitt serves as the director of the UCSF bioinformatics and medical informatics graduate program.[ citation needed ] She also serves on the advisory boards for the UniProt, InterPro [9] and MetaCyc databases, the Howard Hughes Medical Institute (HHMI) scientific review board, and as a deputy editor for PLOS Computational Biology . [10] Her research interests include bioinformatics and computational biology. [2] [8] [11]

Awards and honors

Babbitt was elected a Fellow of the International Society for Computational Biology (ISCB) in 2018 for “outstanding contributions to the fields of computational biology and bioinformatics”. [1]

Related Research Articles

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Rita Casadio is a Professor of Biochemistry at the University of Bologna.

Katherine Snowden Pollard is a Professor at the Gladstone Institute of data science and biotechnology at the University of California, San Francisco (UCSF). She was awarded Fellowship of the International Society for Computational Biology in 2020 for outstanding contributions to computational biology and bioinformatics.

Zhiping Weng is the Li Weibo Professor of biomedical research and chair of the program in integrative biology and bioinformatics at the University of Massachusetts Medical School. She was awarded Fellowship of the International Society for Computational Biology (ISCB) in 2020 for outstanding contributions to computational biology and bioinformatics.

References

  1. 1 2 Anon (2018). "ISCB Fellows". iscb.org. International Society for Computational Biology. Archived from the original on 2017-03-20. Retrieved 2018-03-14.
  2. 1 2 3 4 Patricia Babbitt publications indexed by Google Scholar OOjs UI icon edit-ltr-progressive.svg
  3. 1 2 3 4 Babbit, Patricia Clement (1988). Sequence determination, expression, and site-directed mutagenesis of creatine kinase (PhD thesis). University of California, San Francisco. OCLC   19528718. ProQuest   303714424.(subscription required)
  4. 1 2 "Patricia Babbitt UCSF Profile". profiles.ucsf.edu.
  5. "Babbitt Lab Website". babbittlab.ucsf.edu. Archived from the original on 2017-12-19. Retrieved 2018-03-14.
  6. Gerlt, John A.; Babbitt, Patricia C. (2001). "Divergent Evolution of Enzymatic Function: Mechanistically Diverse Superfamilies and Functionally Distinct Suprafamilies". Annual Review of Biochemistry . 70 (1): 209–246. doi:10.1146/annurev.biochem.70.1.209. ISSN   0066-4154. PMID   11395407. Closed Access logo transparent.svg
  7. Radivojac, Predrag; Clark, Wyatt T; Oron, Tal Ronnen; Schnoes, Alexandra M; Wittkop, Tobias; Sokolov, Artem; Graim, Kiley; Funk, Christopher; Verspoor, Karin; Ben-Hur, Asa; Pandey, Gaurav; Yunes, Jeffrey M; Talwalkar, Ameet S; et al. (2013). "A large-scale evaluation of computational protein function prediction". Nature Methods . 10 (3): 221–227. doi:10.1038/nmeth.2340. ISSN   1548-7091. PMC   3584181 . PMID   23353650. Open Access logo PLoS transparent.svg
  8. 1 2 Patricia Babbitt publications from Europe PubMed Central
  9. Finn, Robert D.; Attwood, Teresa K.; Babbitt, Patricia C.; Bateman, Alex; Bork, Peer; Bridge, Alan J.; Chang, Hsin-Yu; Dosztányi, Zsuzsanna; El-Gebali, Sara; Fraser, Matthew; Gough, Julian; Haft, David; Holliday, Gemma L.; Huang, Hongzhan; Huang, Xiaosong; Letunic, Ivica; Lopez, Rodrigo; Lu, Shennan; Marchler-Bauer, Aron; Mi, Huaiyu; Mistry, Jaina; Natale, Darren A.; Necci, Marco; Nuka, Gift; Orengo, Christine A.; Park, Youngmi; Pesseat, Sebastien; Piovesan, Damiano; Potter, Simon C.; Rawlings, Neil D.; Redaschi, Nicole; Richardson, Lorna; Rivoire, Catherine; Sangrador-Vegas, Amaia; Sigrist, Christian; Sillitoe, Ian; Smithers, Ben; Squizzato, Silvano; Sutton, Granger; Thanki, Narmada; Thomas, Paul D; Tosatto, Silvio C. E.; Wu, Cathy H.; Xenarios, Ioannis; Yeh, Lai-Su; Young, Siew-Yit; Mitchell, Alex L. (2017). "InterPro in 2017—beyond protein family and domain annotations". Nucleic Acids Research. 45 (D1): D190–D199. doi:10.1093/nar/gkw1107. ISSN   0305-1048. PMC   5210578 . PMID   27899635.
  10. "CMNS Distinguished Woman Faculty Lecture". umd.edu. University of Maryland.
  11. Patricia Babbitt at DBLP Bibliography Server OOjs UI icon edit-ltr-progressive.svg