Serafim Batzoglou

Last updated
Serafim Batzoglou
Serafim Batzoglou 2016.jpg
Born
Alma mater MIT
Scientific career
Thesis  (2000)
Doctoral advisor Bonnie Berger
Website http://www.serafimb.org

Serafim Batzoglou is Chief Data Officer at Seer Inc. [1] Prior to that he was Chief Data Officer at insitro, VP of computational genomics at Illumina, and professor of computer science at Stanford University between 2001 and 2016. His lab focused on computational genomics with special interest in developing algorithms, machine learning methods, and systems for the analysis of large scale genomic data. [2] He has also been involved with the Human Genome Project and ENCODE.

Contents

Background

Batzoglou did his undergraduate studies at MIT and obtained his PhD in Computer Science from MIT in 2000 under the supervision of Bonnie Berger. [3]

Awards

Related Research Articles

<span class="mw-page-title-main">Daphne Koller</span> Israeli-American computer scientist

Daphne Koller is an Israeli-American computer scientist. She was a professor in the department of computer science at Stanford University and a MacArthur Foundation fellowship recipient. She is one of the founders of Coursera, an online education platform. Her general research area is artificial intelligence and its applications in the biomedical sciences. Koller was featured in a 2004 article by MIT Technology Review titled "10 Emerging Technologies That Will Change Your World" concerning the topic of Bayesian machine learning.

<span class="mw-page-title-main">Michael Waterman</span> American mathematician

Michael Spencer Waterman is a Professor of Biology, Mathematics and Computer Science at the University of Southern California (USC), where he holds an Endowed Associates Chair in Biological Sciences, Mathematics and Computer Science. He previously held positions at Los Alamos National Laboratory and Idaho State University.

<span class="mw-page-title-main">David Haussler</span> American bioinformatician

David Haussler is an American bioinformatician known for his work leading the team that assembled the first human genome sequence in the race to complete the Human Genome Project and subsequently for comparative genome analysis that deepens understanding the molecular function and evolution of the genome.

<span class="mw-page-title-main">Russ Altman</span>

Russ Biagio Altman is an American professor of bioengineering, genetics, medicine, and biomedical data science and past chairman of the bioengineering department at Stanford University.

<span class="mw-page-title-main">Eugene Myers</span>

Eugene Wimberly "Gene" Myers, Jr. is an American computer scientist and bioinformatician, who is best known for contributing to the early development of the NCBI's BLAST tool for sequence analysis.

Trey Ideker is a professor of medicine and bioengineering at UC San Diego. He is the Director of the National Resource for Network Biology, the San Diego Center for Systems Biology, and the Cancer Cell Map Initiative. He uses genome-scale measurements to construct network models of cellular processes and disease.

<span class="mw-page-title-main">Olga Troyanskaya</span> American academic

Olga G. Troyanskaya is a Professor in the Department of Computer Science and the Lewis-Sigler Institute for Integrative Genomics at Princeton University and the Deputy Director for Genomics at the Flatiron Institute's Center for Computational Biology in NYC. She studies protein function and interactions in biological pathways by analyzing genomic data using computational tools.

<span class="mw-page-title-main">Aviv Regev</span> Bioinformatician

Aviv Regev is a computational biologist and systems biologist and Executive Vice President and Head of Genentech Research and Early Development in Genentech/Roche. She is a core member at the Broad Institute of MIT and Harvard and professor at the Department of Biology of the Massachusetts Institute of Technology. Regev is a pioneer of single cell genomics and of computational and systems biology of gene regulatory circuits. She founded and leads the Human Cell Atlas project, together with Sarah Teichmann.

<span class="mw-page-title-main">Atul Butte</span> American medical researcher

Atul J. Butte is a biomedical informatics researcher and biotechnology entrepreneur. He is currently the Priscilla Chan and Mark Zuckerberg Distinguished Professor at the University of California, San Francisco. Since April 2015, Butte has serves as inaugural director of UCSF's Bakar Computational Health Sciences Institute.

<span class="mw-page-title-main">Ramesh Raskar</span>

Ramesh Raskar is a Massachusetts Institute of Technology Associate Professor and head of the MIT Media Lab's Camera Culture research group. Previously he worked as a Senior Research Scientist at Mitsubishi Electric Research Laboratories (MERL) during 2002 to 2008. He holds 132 patents in computer vision, computational health, sensors and imaging. He received the $500K Lemelson–MIT Prize in 2016. The prize money will be used for launching REDX.io, a group platform for co-innovation in Artificial Intelligence. He is well known for inventing EyeNetra, EyeCatra and EyeSelfie, Femto-photography and his TED talk for cameras to see around corners.

<span class="mw-page-title-main">Gary Stormo</span> American geneticist (born 1950)

Gary Stormo is an American geneticist and currently Joseph Erlanger Professor in the Department of Genetics and the Center for Genome Sciences and Systems Biology at Washington University School of Medicine in St Louis. He is considered one of the pioneers of bioinformatics and genomics. His research combines experimental and computational approaches in order to identify and predict regulatory sequences in DNA and RNA, and their contributions to the regulatory networks that control gene expression.

<span class="mw-page-title-main">Dana Pe'er</span>

Dana Pe'er is currently the Chair and Professor in Computational and Systems Biology Program at Sloan Kettering Institute, and regarded as one of the leading researchers in computational systems biology. She was selected as a Howard Hughes Medical Institute (HHMI) Investigator in September, 2021. Previously, she was a professor at Columbia Department of Biological Sciences. Pe'er's research focuses on understanding the organization, function and evolution of molecular networks, particularly how genetic variations alter the regulatory network and how these genetic variations can cause cancer.

<span class="mw-page-title-main">Ziv Bar-Joseph</span> Israeli computational biologist

Ziv Bar-Joseph is an Israeli computational biologist and Professor in the Computational Biology Department and the Machine Learning Department at the Carnegie Mellon School of Computer Science.

<span class="mw-page-title-main">Bonnie Berger</span> American mathematician and computer scientist

Bonnie Anne Berger is an American mathematician and computer scientist, who works as the Simons professor of mathematics and professor of electrical engineering and computer science at the Massachusetts Institute of Technology. Her research interests are in algorithms, bioinformatics and computational molecular biology.

<span class="mw-page-title-main">Jeffrey Heer</span> American computer scientist

Jeffrey Michael Heer is an American computer scientist best known for his work on information visualization and interactive data analysis. He is a professor of computer science & engineering at the University of Washington, where he directs the UW Interactive Data Lab. He co-founded Trifacta with Joe Hellerstein and Sean Kandel in 2012.

Debora S. Marks is a researcher in computational biology and an Associate Professor of Systems Biology at Harvard Medical School. Her research uses computational approaches to address a variety of biological problems.

<span class="mw-page-title-main">Thomas Lengauer</span>

Thomas Lengauer is a German computer scientist and computational biologist.

The ISCB Innovator Award is a computational biology prize awarded annually to leading scientists who are within two decades post-degree, who consistently make outstanding contributions to the field, and who continue to forge new directions. The prize was established by the International Society for Computational Biology (ISCB) in 2016 and is awarded at the Intelligent Systems for Molecular Biology (ISMB) conference. The inaugural recipient was Serafim Batzoglou.

Ashutosh Saxena is an Indian-American computer scientist, researcher, and entrepreneur known for his contributions to the field of artificial intelligence and robotics. His research interests include deep learning, robotics, and 3-dimensional computer vision. Saxena is the co-founder and CEO of Caspar.AI, which is an artificial intelligence company that automates peoples' homes and builds applications such as fall detectors for senior living. Prior to Caspar.AI, Ashutosh co-founded Cognical Katapult, which provides a no credit required alternative to traditional financing for online and omni-channel retail. Before Katapult, Saxena was an assistant professor in the Computer Science Department and faculty director of the RoboBrain Project at Cornell University.

<span class="mw-page-title-main">M. Madan Babu</span> Indian-American computational biologist

M. Madan Babu is an Indian-American computational biologist and bioinformatician. He is the endowed chair in biological data science and director of the center of excellence for data-driven discovery at St. Jude Children’s Research Hospital. Previously, he served as a programme leader at the MRC Laboratory of Molecular Biology (LMB).

References

  1. "Seer".
  2. "Serafim's Lab at Stanford University".
  3. "Serafim Batzoglou | Stanford University".
  4. "Feb 17, 2016: ISCB Congratulates 2016 Award Winners, Soren Brunak, Debora Marks, Burkhard Rost, and Serafim Batzoglou". www.iscb.org. Retrieved 2016-07-12.