Atul Janardhan Butte [1] | |
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Born | |
Education | Brown University (BS, MS, MD) Massachusetts Institute of Technology (PhD) |
Awards | Fellow of the American College of Medical Informatics (2009) National Academy of Medicine (IOM, 2015) [2] |
Scientific career | |
Fields | Bioinformatics, health informatics, endocrinology, personalized medicine, genomics, big data, datamining |
Institutions | Stanford University UCSF |
Thesis | Exploring genomic medicine using integrative biology (2004) |
Doctoral advisor | Isaac Kohane |
Doctoral students | Joel Dudley |
Atul Janardhan Butte or Atul J. Butte is an American biomedical informatician, pediatrician, and biotechnology entrepreneur. He is currently the Priscilla Chan and Mark Zuckerberg Distinguished Professor at the University of California, San Francisco. Since April 2015, Butte has serves as inaugural director of UCSF's Bakar Computational Health Sciences Institute. [3]
Butte was born in Philadelphia to Janardhan Butte and Mangala Butte. [4] He attended Brown University, where he studied computer science as an undergraduate student. As a member of the school's Program in Liberal Medical Education he was guaranteed acceptance to Brown's Alpert Medical School, where he obtained his MD in 1995.
Butte completed a residency in pediatrics and a fellowship in pediatric endocrinology, both at Children's Hospital Boston. In 2004, he completed a Ph.D. from the Harvard–MIT Division of Health Sciences and Technology, supervised by Dr. Isaac Kohane. [5]
Butte moved to California and became an assistant professor at Stanford University in 2005. He later became the Chief of the Division of Systems Medicine at Stanford University School of Medicine and Lucile Packard Children's Hospital where he held the position of an associate professor of pediatrics and (by courtesy) computer science and immunology & rheumatology. [6] He moved to the University of California, San Francisco in 2015.
In April 2012, Butte delivered a TEDMED talk describing his lab's development of techniques using massive amount of publicly available biomedical research data to make new discoveries without running a wet-lab and actually outsourcing experiments using assaydepot.com. [7]
Butte has an h-index of over 110 and is recognized by Publons as a highly cited researcher. [8] [9] He has also founded two biotechnology companies (Personalis [10] and NuMedii [11] ) and wrote one of the first books on microarray analysis, Microarrays for an Integrative Genomics.
Butte lives with his wife, Gini Deshpande, a cancer biology and biotechnology entrepreneur, and daughter in Menlo Park, CA. [12] [13] As of 2018 [update] , Deshpande was the chief executive officer of NuMedii, an artificial intelligence technology company. [14] His brother Manish J. Butte [4] is a pediatrician at University of California, Los Angeles.
In 2013, Butte was recognized as an Open Science Champion of Change by the White House. [15] In 2015, he was elected a member of the National Academy of Medicine. [16] In 2021, Butte was elected as a Fellow of the International Society for Computational Biology. [17] In 2024, he received the Award for Excellence in Molecular Diagnostics from the Association for Molecular Pathology and the Morris F. Collen Award of Excellence from the American College of Medical Informatics. [18] [19]
The University of California, San Francisco (UCSF), is a public land-grant research university in San Francisco, California, United States. It is part of the University of California system and is dedicated entirely to health science and life science. It conducts research and teaching in medical and biological sciences.
The Program in Liberal Medical Education, or PLME, is an eight-year combined baccalaureate-M.D. medical program offered by Brown University. Members of the program are simultaneously accepted into both the undergraduate College of Brown University as well as the Warren Alpert Medical School, allowing them to receive a Bachelor's degree and an M.D. as part of a single eight-year continuum. The PLME is the only combined medical program in the Ivy League, as well as one of only approximately 120 in the nation. The program is highly selective, admitting fewer than 90 applicants nationwide and internationally each year, with an acceptance rate of 2.19% for the class of 2026. The PLME is widely considered to be one of the most competitive and prestigious combined medical programs in the country.
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Russ Biagio Altman is an American professor of bioengineering, genetics, medicine, and biomedical data science and past chairman of the bioengineering department at Stanford University.
Homer Richards Warner was an American cardiologist who was an early proponent of medical informatics who pioneered many aspects of computer applications to medicine. Author of the book, Computer-Assisted Medical Decision-Making, published in 1979, he served as CIO for the University of Utah Health Sciences Center, as president of the American College of Medical Informatics, and was actively involved with the National Institutes of Health. He was first chair of the Department of Medical Informatics at the University of Utah School of Medicine, the first American medical program to formally offer a degree in medical informatics.
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Translational bioinformatics (TBI) is a field that emerged in the 2010s to study health informatics, focused on the convergence of molecular bioinformatics, biostatistics, statistical genetics and clinical informatics. Its focus is on applying informatics methodology to the increasing amount of biomedical and genomic data to formulate knowledge and medical tools, which can be utilized by scientists, clinicians, and patients. Furthermore, it involves applying biomedical research to improve human health through the use of computer-based information system. TBI employs data mining and analyzing biomedical informatics in order to generate clinical knowledge for application. Clinical knowledge includes finding similarities in patient populations, interpreting biological information to suggest therapy treatments and predict health outcomes.
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Gary Stormo is an American geneticist and currently Joseph Erlanger Professor in the Department of Genetics and the Center for Genome Sciences and Systems Biology at Washington University School of Medicine in St Louis. He is considered one of the pioneers of bioinformatics and genomics. His research combines experimental and computational approaches in order to identify and predict regulatory sequences in DNA and RNA, and their contributions to the regulatory networks that control gene expression.
The UCSF School of Medicine is the medical school of the University of California, San Francisco and is located at the base of Mount Sutro on the Parnassus Heights campus in San Francisco, California. Founded in 1864 by Hugh Toland, it is the oldest medical school in California and in the western United States.
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Dean Forrest Sittig is an American biomedical informatician specializing in clinical informatics. He is a professor in Biomedical Informatics at the University of Texas Health Science Center at Houston and Executive Director of the Clinical Informatics Research Collaborative (CIRCLE). Sittig was elected as a fellow of the American College of Medical Informatics in 1992, the Healthcare Information and Management Systems Society in 2011, and was a founding member of the International Academy of Health Sciences Informatics in 2017. Since 2004, he has worked with Joan S. Ash, a professor at Oregon Health & Science University to interview several Pioneers in Medical Informatics, including G. Octo Barnett, MD, Morris F. Collen, MD, Donald E. Detmer, MD, Donald A. B. Lindberg, MD, Nina W. Matheson, ML, DSc, Clement J. McDonald, MD, and Homer R. Warner, MD, PhD.
Katherine Snowden Pollard is the Director of the Gladstone Institute of Data Science and Biotechnology and a professor at the University of California, San Francisco (UCSF). She is a Chan Zuckerberg Biohub Investigator. She was awarded Fellowship of the International Society for Computational Biology in 2020 and the American Institute for Medical and Biological Engineering in 2021 for outstanding contributions to computational biology and bioinformatics.
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Morris F. Collen Award of Excellence is the highest honor presented by the American College of Medical Informatics. It is awarded annually to "an individual whose personal commitment and dedication to biomedical informatics has made a lasting impression on healthcare and biomedicine". The award was established in 1993 to honor Morris F. Collen, the founder of biomedical informatics, and was also the recipient of the first year's award. Recipients of this award have made significant contributions to medical informatics research, education, or leadership, advancing healthcare through innovative uses of information technology.