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Agar, or agar-agar, is a jelly-like substance consisting of polysaccharides obtained from the cell walls of some species of red algae, primarily from "ogonori" (Gracilaria) and "tengusa" (Gelidiaceae). As found in nature, agar is a mixture of two components, the linear polysaccharide agarose and a heterogeneous mixture of smaller molecules called agaropectin. It forms the supporting structure in the cell walls of certain species of algae and is released on boiling. These algae are known as agarophytes, belonging to the Rhodophyta phylum. The processing of food-grade agar removes the agaropectin, and the commercial product is essentially pure agarose.
Heinrich Anton de Bary was a German surgeon, botanist, microbiologist, and mycologist . He is considered a founding father of plant pathology (phytopathology) as well as the founder of modern mycology. His extensive and careful studies of the life history of fungi and contribution to the understanding of algae and higher plants established landmarks in biology.
Phytophthora infestans is an oomycete or water mold, a fungus-like microorganism that causes the serious potato and tomato disease known as late blight or potato blight. Early blight, caused by Alternaria solani, is also often called "potato blight". Late blight was a major culprit in the 1840s European, the 1845–1852 Irish, and the 1846 Highland potato famines. The organism can also infect some other members of the Solanaceae. The pathogen is favored by moist, cool environments: sporulation is optimal at 12–18 °C (54–64 °F) in water-saturated or nearly saturated environments, and zoospore production is favored at temperatures below 15 °C (59 °F). Lesion growth rates are typically optimal at a slightly warmer temperature range of 20 to 24 °C.
The Oomycetes, or Oomycota, form a distinct phylogenetic lineage of fungus-like eukaryotic microorganisms within the Stramenopiles. They are filamentous and heterotrophic, and can reproduce both sexually and asexually. Sexual reproduction of an oospore is the result of contact between hyphae of male antheridia and female oogonia; these spores can overwinter and are known as resting spores. Asexual reproduction involves the formation of chlamydospores and sporangia, producing motile zoospores. Oomycetes occupy both saprophytic and pathogenic lifestyles, and include some of the most notorious pathogens of plants, causing devastating diseases such as late blight of potato and sudden oak death. One oomycete, the mycoparasite Pythium oligandrum, is used for biocontrol, attacking plant pathogenic fungi. The oomycetes are also often referred to as water molds, although the water-preferring nature which led to that name is not true of most species, which are terrestrial pathogens.
An agar plate is a Petri dish that contains a growth medium solidified with agar, used to culture microorganisms. Sometimes selective compounds are added to influence growth, such as antibiotics.
Phytophthora is a genus of plant-damaging oomycetes, whose member species are capable of causing enormous economic losses on crops worldwide, as well as environmental damage in natural ecosystems. The cell wall of Phytophthora is made up of cellulose. The genus was first described by Heinrich Anton de Bary in 1875. Approximately 210 species have been described, although 100–500 undiscovered Phytophthora species are estimated to exist.
A lima bean, also commonly known as butter bean, sieva bean, double bean or Madagascar bean, is a legume grown for its edible seeds or beans.
Russet Burbank is a potato cultivar with dark brown skin and few eyes that is the most widely grown potato in North America. A russet type, its flesh is white, dry, and mealy, and it is good for baking, mashing, and french fries (chips). It is a common and popular potato.
Phytophthora sojae is an oomycete and a soil-borne plant pathogen that causes stem and root rot of soybean. This is a prevalent disease in most soybean growing regions, and a major cause of crop loss. In wet conditions the pathogen produces zoospores that move in water and are attracted to soybean roots. Zoospores can attach to roots, germinate, and infect the plant tissues. Diseased roots develop lesions that may spread up the stem and eventually kill the entire plant. Phytophthora sojae also produces oospores that can remain dormant in the soil over the winter, or longer, and germinate when conditions are favourable. Oospores may also be spread by animals or machinery.
Hericium erinaceus is an edible mushroom belonging to the tooth fungus group. Native to North America, Europe, and Asia, it can be identified by its long spines, occurrence on hardwoods, and tendency to grow a single clump of dangling spines. The fruit bodies can be harvested for culinary use.
Potato dextrose agar and potato dextrose broth are common microbiological growth media made from potato infusion and dextrose. Potato dextrose agar is the most widely used medium for growing fungi and bacteria.
Phytophthora megasperma is a species of water mould in the family Peronosporaceae. It is well known as a plant pathogen with many hosts. It often causes a plant disease called root rot.
Alternaria solani is a fungal pathogen that produces a disease in tomato and potato plants called early blight. The pathogen produces distinctive "bullseye" patterned leaf spots and can also cause stem lesions and fruit rot on tomato and tuber blight on potato. Despite the name "early," foliar symptoms usually occur on older leaves. If uncontrolled, early blight can cause significant yield reductions. Primary methods of controlling this disease include preventing long periods of wetness on leaf surfaces and applying fungicides. Early blight can also be caused by Alternaria tomatophila, which is more virulent on stems and leaves of tomato plants than Alternaria solani.
Phytophthora capsici is an oomycete plant pathogen that causes blight and fruit rot of peppers and other important commercial crops. It was first described by L. Leonian at the New Mexico State University Agricultural Experiment Station in Las Cruces in 1922 on a crop of chili peppers. In 1967, a study by M. M. Satour and E. E. Butler found 45 species of cultivated plants and weeds susceptible to P. capsici In Greek, Phytophthora capsici means "plant destroyer of capsicums". P. capsici has a wide range of hosts including members of the families Solanaceae and Cucurbitaceae as well as Fabaceae.
Diaporthe phaseolorum var. sojae is a plant pathogen infecting soybean and peanut.
This article summarizes different crops, what common fungal problems they have, and how fungicide should be used in order to mitigate damage and crop loss. This page also covers how specific fungal infections affect crops present in the United States.
Fluazinam is a broad-spectrum fungicide used in agriculture. It is classed as a diarylamine and more specifically an arylaminopyridine. Its chemical name is 3-chloro-N-(3-chloro-2,6-dinitro-4-trifluoromethylphenyl)-5-trifluoromethyl-2-pyridinamine. The mode of action involves the compound being an extremely potent uncoupler of oxidative phosphorylation in mitochondria and also having high reactivity with thiols. It is unique amongst uncouplers in displaying broad-spectrum activity against fungi and also very low toxicity to mammals due to it being rapidly metabolised to a compound without uncoupling activity. It was first described in 1992 and was developed by researchers at the Japanese company Ishihara Sangyo Kaisha.
Collar rot is a symptomatically described disease that is usually caused by any one of various fungal and oomycete plant pathogens. It is present where the pathogen causes a lesion localized at or about the collet between the stem and the root. The lesions develop around the stem eventually forming a "collar". Observationally, collar rot grades into "basal stem rot", and with some pathogens is the first phase of "basal stem rot" often followed by "root rot". Collar rot is most often observed in seedings grown in infected soil. The pathogens that cause collar rot may be species or genera specific. But generalist pathogens such as Agroathelia rolfsii are known to attack over 200 different species. While bacteria caused collar rot is not common, trees infected with Fire blight may develop collar rot. Non-parasitic collar rot may be caused by winter damage.
Lima bean agar (LBA) is an agar medium which is used to cultivate the spores of Phytophthora sojae. Phytophthora sojae causes soybean blight. Soybean blight can affect the output and quality of soybeans seriously. The spore of Phytophthora sojae is difficult to culture in potato dextrose agar; it is generally cultured by lima bean agar and carrot agar. Lima bean agar can cultivate, separate, reproduce and conserve many types of Phytophthora sojae spores, but it is not suitable for cultivating the pathogen of potato late blight.
Carrot medium is a kind of growth medium made from a mixture of agar and carrot powder.
References
- Sinclair, J.B.; Dhingra, O.D. (1995). Basic Plant Pathology Methods. Taylor & Francis. p. 36. ISBN 978-0-87371-638-3.
- Santamaria, L. (2007). Evaluation of Lima Bean (Phaseolus Lunatus) Germplasm for Resistance to Downy Mildew, and Epidemiological and Biological Studies of Its Causal Agent, Phytophthora Phaseoli. University of Delaware. pp. 39–40. ISBN 978-0-549-39600-0.