aconitate decarboxylase | |||||||||
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Identifiers | |||||||||
EC no. | 4.1.1.6 | ||||||||
CAS no. | 9025-01-8 | ||||||||
Databases | |||||||||
IntEnz | IntEnz view | ||||||||
BRENDA | BRENDA entry | ||||||||
ExPASy | NiceZyme view | ||||||||
KEGG | KEGG entry | ||||||||
MetaCyc | metabolic pathway | ||||||||
PRIAM | profile | ||||||||
PDB structures | RCSB PDB PDBe PDBsum | ||||||||
Gene Ontology | AmiGO / QuickGO | ||||||||
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The enzyme aconitate decarboxylase (EC 4.1.1.6) (i.e., ACOD1, also termed cis-aconitate decarboxylase, immune-responsive gene 1, immune response gene 1, and IRK1 [1] [2] ) is a protein enzyme that in humans is encoded by the decarboxylase 1 aconitate decarboxylase 1 gene located at position 22.3 on the long arm (i.e., p-arm) of chromosome 13. [3] ACOD1 catalyzes the following reversible (i.e., runs in both directions, as indicated by ) decarboxylation chemical reaction: [4] [5] [6]
Hence, ACOD1 converts cis-aconitate into two products, itaconate and CO2 or itaconate and CO2 into one product, aconitate.
ACOD1 belongs to the family of lyases, specifically the carboxy-lyases, which cleave carbon-carbon bonds. The systematic name of this enzyme class is cis-aconitate carboxy-lyase (itaconate-forming). Other names once in common use for this enzyme class include CAD and cis-aconitate carboxy-lyase. ACOD1 participates in c5-branched dibasic acid metabolism. [7]
Ustilago maydis (a species of Ustilago fungi) converts cis-aconitate to its thermodynamically favored product, trans-aconitate, by the enzyme aconitate delta-isomerase (i.e., Adi1). The trans-aconitate product is decarboxylated to itaconate by trans-aconitate decarboxylase (i.e., Tad1). [8] This Adi followed by Tad 1 enzymatic metabolic pathway is:
Trans-aconitate decarboxylase does not metabolize cis-aconitate to itaconate. [8] (The genes for aconitate delta-isomerase and trans-aconitate decarboxylase have been reported in several types of fungi hut not in other organisms, including humand, and are classified as provisional, i.e., accepted provisional to further studies.)
Itaconic acid (also termed methylidenesuccinic acid and 2-methylidenebutanedioic acid) is a fatty acid containing five carbons (carbon notated as C), two of which are in carboxyl groups (notated as -CO2H) (its chemical formula is C5H6O4, see adjacent figure and dicarboxylic acids). At pH levels below 2, itaconic acid is electrically neutral because both of its carboxy residues are bound to hydrogen (notated as H); at pH levels above 7, it is double negatively charged because both of its carboxy residues are not bound to hydrogen, i.e., CO2 (its formula is C5H4O42-); and at pH's between 2 and 7 it exists as a mixture with none, one, or both of its carboxy residues being bound to hydrogen. In the cells and most tissue fluids of living animals, which generally have pH levels above 7, itaconic acid exists almost exclusively in its double negatively charged form; this form of itaconic acid is termed itaconate.
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