Coproporphyrinogen dehydrogenase

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coproporphyrinogen dehydrogenase
Identifiers
EC no. 1.3.98.3
Databases
IntEnz IntEnz view
BRENDA BRENDA entry
ExPASy NiceZyme view
KEGG KEGG entry
MetaCyc metabolic pathway
PRIAM profile
PDB structures RCSB PDB PDBe PDBsum
Gene Ontology AmiGO / QuickGO
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NCBI proteins

In enzymology, coproporphyrinogen dehydrogenase (EC 1.3.98.3) is an enzyme that catalyzes the chemical reaction

+ 2 SAM
 
 
 
2 CO2
Coproporphyrinogen dehydrogenase
 
 
 
+ 2 methionine
+ 2 5'-deoxyadenosine
 

The two substrates of this enzyme are coproporphyrinogen III and S-adenosyl methionine (SAM). Its products are protoporphyrinogen IX, carbon dioxide, methionine, and 5'-deoxyadenosine. [1] [2] It is an example of a radical SAM enzyme. [3] [4]

This enzyme belongs to the family of oxidoreductases, specifically those acting on the CH-CH group of donor with other acceptors. The systematic name of this enzyme class is coproporphyrinogen-III:S-adenosyl-L-methionine oxidoreductase (decarboxylating). Other names in common use include oxygen-independent coproporphyrinogen-III oxidase, HemF, HemN, radical SAM enzyme, and coproporphyrinogen III oxidase. This enzyme participates in the biosynthesis of porphyrins and chlorophyll. HemN is the oxygen-independent oxidase produced in Escherichia coli . HemF is the oxygen-dependent oxidase within E. coli. Importantly, only HemN utilizes S-adenosyl methionine. Human variants of Coproporphyrinogen oxidase are cofactor-independent. [5] [6]

See also

References

  1. Enzyme 1.3.98.3 at KEGG Pathway Database.
  2. Layer G, Verfurth K, Mahlitz E, Jahn D (2002). "Oxygen-independent coproporphyrinogen-III oxidase HemN from Escherichia coli". J. Biol. Chem. 277 (37): 34136–42. doi: 10.1074/jbc.M205247200 . PMID   12114526.
  3. Layer G, Moser J, Heinz DW, Jahn D, Schubert WD (2003). "Crystal structure of coproporphyrinogen III oxidase reveals cofactor geometry of Radical SAM enzymes". EMBO J. 22 (23): 6214–24. doi:10.1093/emboj/cdg598. PMC   291839 . PMID   14633981.
  4. Layer, Gunhild; Moser, Jürgen; Heinz, Dirk W.; Jahn, Dieter; Schubert, Wolf-Dieter (2003-12-01). "Crystal structure of coproporphyrinogen III oxidase reveals cofactor geometry of Radical SAM enzymes". The EMBO Journal. 22 (23): 6214–6224. doi:10.1093/emboj/cdg598. ISSN   0261-4189. PMC   291839 . PMID   14633981.
  5. Fetzner, Susanne; Steiner, Roberto A. (2010-02-16). "Cofactor-independent oxidases and oxygenases". Applied Microbiology and Biotechnology. 86 (3): 791–804. doi:10.1007/s00253-010-2455-0. hdl: 11577/3402980 . ISSN   0175-7598. PMID   20157809.
  6. Breckau, Daniela; Mahlitz, Esther; Sauerwald, Anselm; Layer, Gunhild; Jahn, Dieter (2003-11-21). "Oxygen-dependent coproporphyrinogen III oxidase (HemF) from Escherichia coli is stimulated by manganese". The Journal of Biological Chemistry. 278 (47): 46625–46631. doi: 10.1074/jbc.M308553200 . ISSN   0021-9258. PMID   12975365.