Methanomicrobia

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Methanomicrobia
Methanosarcina barkeri fusaro.gif
Methanosarcina barkeri fusaro
Scientific classification OOjs UI icon edit-ltr.svg
Domain: Archaea
Kingdom: Euryarchaeota
(unranked): Stenosarchaea
Class: Methanomicrobia
Garrity, Bell & Lilburn 2003
Orders
Synonyms
  • "Methanocellia" Cavalier-Smith 2020
  • "Methanosarcinia" Rinke et al. 2020

In the taxonomy of microorganisms, the Methanomicrobia are a class of the Euryarchaeota. [1]

Contents

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) [2] and National Center for Biotechnology Information (NCBI). [1]

16S rRNA based LTP_06_2022 [3] [4] [5] 53 marker proteins based GTDB 08-RS214 [6] [7] [8]
"Methanomicrobia"

Methermicoccus

Methanosarcinales

Methanocellales

Methanomicrobiales

"Methanoliparia"

"Methanoliparales"

"Syntropharchaeia"

"Syntropharchaeales"

"Methanocellia"

Methanocellales

"Methanosarcinia"

Methanotrichales

Methanosarcinales

"Methanosarcinia_A"

Methermicoccus

"Methanomicrobia"

Methanomicrobiales

See also

Related Research Articles

<span class="mw-page-title-main">Euryarchaeota</span> Phylum of archaea

Euryarchaeota is a phylum of archaea. Euryarchaeota are highly diverse and include methanogens, which produce methane and are often found in intestines, halobacteria, which survive extreme concentrations of salt, and some extremely thermophilic aerobes and anaerobes, which generally live at temperatures between 41 and 122 °C. They are separated from the other archaeans based mainly on rRNA sequences and their unique DNA polymerase.

Chrysiogenaceae is a family of bacteria.

The Thermoprotei is a class of the Thermoproteota.

In taxonomy, the Methanopyri are a class of the Euryarchaeota.

<span class="mw-page-title-main">Thermoplasmata</span> Class of archaea

In taxonomy, the Thermoplasmata are a class of the Euryarchaeota.

<span class="mw-page-title-main">Thermoplasmataceae</span> Family of archaea

In taxonomy, the Thermoplasmataceae are a family of the Thermoplasmatales. It contains only one genus, Thermoplasma. All species within Thermoplasmataceae are thermoacidophiles, and they grow at a temperature of 60 °C and pH 2. They were isolated from hydrothermal vents, fumaroles and similar environments.

<span class="mw-page-title-main">Thermoplasmatales</span> Order of archaea

In taxonomy, the Thermoplasmatales are an order of the Thermoplasmata. All are acidophiles, growing optimally at pH below 2. Picrophilus is currently the most acidophilic of all known organisms, being capable of growing at a pH of -0.06. Many of these organisms do not contain a cell wall, although this is not true in the case of Picrophilus. Most members of the Thermotoplasmata are thermophilic.

In taxonomy, the Picrophilaceae are a family of microbes within Thermoplasmatales.

<span class="mw-page-title-main">Thermococci</span> Class of archaea

In taxonomy, the Thermococci are a class of microbes within the Euryarchaeota.

<span class="mw-page-title-main">Methanococci</span> Class of archaea

Methanococci is a class of methanogenic archaea in the phylum Euryarchaeota. They can be mesophilic, thermophilic or hyperthermophilic.

<span class="mw-page-title-main">Acidilobales</span> Order of archaea

Acidilobales are an order of archaea in the class Thermoprotei.

<span class="mw-page-title-main">Desulfurococcales</span> Order of archaea

The Desulfurococcales is an order of the Thermoprotei, part of the kingdom Archaea. The order encompasses some genera which are all thermophilic, autotrophs which utilise chemical energy, typically by reducing sulfur compounds using hydrogen. Desulfurococcales cells are either regular or irregular coccus in shape, with forms of either discs or dishes. These cells can be single, in pairs, in short chains, or in aciniform formation.

Methanobacteriales is an order of archaeans in the class Methanobacteria. Species within this order differ from other methanogens in that they can use fewer catabolic substrates and have distinct morphological characteristics, lipid compositions, and RNA sequences. Their cell walls are composed of pseudomurein. Most species are Gram-positive with rod-shaped bodies and some can form long filaments. Most of them use formate to reduce carbon dioxide, but those of the genus Methanosphaera use hydrogen to reduce methanol to methane.

In taxonomy, the Methanococcales are an order of the Methanococci.

<span class="mw-page-title-main">Methanosarcinales</span> Order of archaea

Methanosarcinales is an order of archaeans in the class Methanomicrobia.

In taxonomy, the Ferroplasmaceae are a family of the Thermoplasmatales.

<span class="mw-page-title-main">Methanosarcinaceae</span> Family of archaea

In taxonomy, the Methanosarcinaceae are a family of the Methanosarcinales.

The Pyrodictiaceae are a family of disc-shaped anaerobic microorganisms belonging to the order Desulfurococcales, in the domain Archaea. Members of this family are distinguished from the other family (Desulfurococcaceae) in the order Desulfurococcales by having an optimal growth temperature above 100 °C, rather than below 100 °C.

Methanocaldococcus formerly known as Methanococcus is a genus of coccoid methanogen archaea. They are all mesophiles, except the thermophilic M. thermolithotrophicus and the hyperthermophilic M. jannaschii. The latter was discovered at the base of a “white smoker” chimney at 21°N on the East Pacific Rise and it was the first archaean genome to be completely sequenced, revealing many novel and eukaryote-like elements.

Heliorestis is an alkaliphilic genus of bacteria from the family of Heliobacteriaceae.

References

  1. 1 2 Sayers; et al. "Methanomicrobia". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2022-06-05.
  2. J.P. Euzéby. "Methanomicrobia". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2021-11-17.
  3. "The LTP" . Retrieved 10 May 2023.
  4. "LTP_all tree in newick format" . Retrieved 10 May 2023.
  5. "LTP_06_2022 Release Notes" (PDF). Retrieved 10 May 2023.
  6. "GTDB release 08-RS214". Genome Taxonomy Database . Retrieved 10 May 2023.
  7. "ar53_r214.sp_label". Genome Taxonomy Database . Retrieved 10 May 2023.
  8. "Taxon History". Genome Taxonomy Database . Retrieved 10 May 2023.

Further reading

Scientific journals

Scientific books