Methanococcales

Last updated

Methanococcales
Scientific classification
Domain:
Kingdom:
Phylum:
Class:
Order:
Methanococcales

Balch and Wolfe 1981
Families

In taxonomy, the Methanococcales are an order of the Methanococci. [1]

Contents

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) [2] and National Center for Biotechnology Information (NCBI). [3]

16S rRNA based LTP_06_2022 [4] [5] [6] 53 marker proteins based GTDB 08-RS214 [7] [8] [9]
Methanocaldococcaceae

Methanocaldococcus

Methanotorris

Methanococcaceae

Methanofervidicoccus

Methanothermococcus thermolithotrophicus

Methanothermococcus okinawensis

Methanococcus aeolicus

Methanococcus

Methanocaldococcaceae

Methanocaldococcus Whitman 2002

Methanococcaceae

Methanotorris Whitman 2002

Methanofervidicoccus Sakai et al. 2019

Methanothermococcus okinawensis Takai et al. 2002

Methanococcus aeolicus Kendall et al. 2006

Methanothermococcus thermolithotrophicus (Huber et al. 1984) Whitman 2002 (type sp.)

Methanococcus Kluyver & van Niel 1936

See also

Related Research Articles

The Thermoprotei is a class of the Thermoproteota.

Methanococcus is a genus of coccoid methanogens of the family Methanococcaceae. They are all mesophiles, except the thermophilic M. thermolithotrophicus and the hyperthermophilic M. jannaschii. The latter was discovered at the base of a “white smoker” chimney at 21°N on the East Pacific Rise and it was the first archaeal genome to be completely sequenced, revealing many novel and eukaryote-like elements.

<span class="mw-page-title-main">Methanomicrobia</span> Class of archaea

In the taxonomy of microorganisms, the Methanomicrobia are a class of the Euryarchaeota.

<span class="mw-page-title-main">Acidilobales</span> Order of archaea

Acidilobales are an order of archaea in the class Thermoprotei.

<span class="mw-page-title-main">Desulfurococcales</span> Order of archaea

The Desulfurococcales is an order of the Thermoprotei, part of the kingdom Archaea. The order encompasses some genera which are all thermophilic, autotrophs which utilise chemical energy, typically by reducing sulfur compounds using hydrogen. Desulfurococcales cells are either regular or irregular coccus in shape, with forms of either discs or dishes. These cells can be single, in pairs, in short chains, or in aciniform formation.

Methanobacteriales is an order of archaeans in the class Methanobacteria. Species within this order differ from other methanogens in that they can use fewer catabolic substrates and have distinct morphological characteristics, lipid compositions, and RNA sequences. Their cell walls are composed of pseudomurein. Most species are Gram-positive with rod-shaped bodies and some can form long filaments. Most of them use formate to reduce carbon dioxide, but those of the genus Methanosphaera use hydrogen to reduce methanol to methane.

In the taxonomy of microorganisms, the Methanomicrobiales are an order of the Methanomicrobia. Methanomicrobiales are strictly carbon dioxide reducing methanogens, using hydrogen or formate as the reducing agent. As seen from the phylogenetic tree based on 'The All-Species Living Tree' Project the family Methanomicrobiaceae is highly polyphyletic within the Methanomicrobiales.

<span class="mw-page-title-main">Sulfolobales</span> Order of archaea

Sulfolobales is an order of archaeans in the class Thermoprotei.

In taxonomy, the Methanocaldococcaceae are a family of microbes within the order Methanococcales. It contains two genera, the type genus Methanocaldococcus and Methanotorris. These species are coccoid in form, neutrophilic to slightly acidophilic, and predominantly motile, and they have a very short generation period, from 25 to 45 minutes under optimal conditions. They produce energy exclusively through the reduction of carbon dioxide with hydrogen. Some species have been found in marine hydrothermal vents.

In taxonomy, the Methanococcaceae are a family of the Methanococcales. These organisms produce methane from formate or through the reduction of carbon dioxide with hydrogen. They live in marshes and other coastal areas. Members of the genus Methanothermococcus have been found in deep-sea hydrothermal vents.

In taxonomy, the Methanocorpusculaceae are a family of microbes within the order Methanomicrobiales. It contains exactly one genus, Methanocorpusculum. The species within Methanocorpusculum were first isolated from anaerobic digesters and anaerobic wastewater treatment plants. In the wild, they prefer freshwater environments. Unlike many other methanogenic archaea, they do not require high temperatures or extreme salt concentrations to live and grow.

Methanomicrobiaceae are a family of archaea in the order the Methanomicrobiales.

Haladaptatus is a genus of halophilic archaea in the family of Halobacteriaceae. The members of Haladaptatus thrive in environments with salt concentrations approaching saturation

Halalkalicoccus is a genus of the Halobacteriaceae.

Halobaculum is a genus of the Halorubraceae.

Halobiforma is a genus of halophilic archaea of the family Natrialbaceae.

Halomicrobium is a genus of the Haloarculaceae.

Halorhabdus is a genus of halophilic archaea in the Haloarculaceae. With an extremely high salinity optimum of 27% NaCl, Halorhabdus has one of the highest reported salinity optima of any living organism.

In taxonomy, Halovivax is a genus of the Natrialbaceae. Some species of Halovivax are halophiles and have been found in Iran's Aran-Bidgol hypersaline lake.

Methanocalculus is a genus of the Methanomicrobiales, and is known to include methanogens.

References

  1. See the NCBI webpage on Methanococcales. Data extracted from the "NCBI taxonomy resources". National Center for Biotechnology Information . Retrieved 2007-03-19.
  2. J.P. Euzéby. "Methanococcales". List of Prokaryotic names with Standing in Nomenclature (LPSN). Archived from the original on 2013-01-27. Retrieved 2011-11-17.
  3. Sayers; et al. "Methanococcales". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2011-06-05.
  4. "The LTP" . Retrieved 10 May 2023.
  5. "LTP_all tree in newick format" . Retrieved 10 May 2023.
  6. "LTP_06_2022 Release Notes" (PDF). Retrieved 10 May 2023.
  7. "GTDB release 08-RS214". Genome Taxonomy Database . Retrieved 10 May 2023.
  8. "ar53_r214.sp_label". Genome Taxonomy Database . Retrieved 10 May 2023.
  9. "Taxon History". Genome Taxonomy Database . Retrieved 10 May 2023.

Further reading

Scientific journals

Scientific books