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| Photobacterium damselae subsp. piscicida | |
|---|---|
Scientific classification  | |
| Domain: | Bacteria |
| Phylum: | Pseudomonadota |
| Class: | Gammaproteobacteria |
| Order: | Vibrionales |
| Family: | Vibrionaceae |
| Genus: | Photobacterium |
| Species: | |
| Subspecies: | P. d. subsp. piscicida |
| Trinomial name | |
| Photobacterium damselae subsp. piscicida | |
Photobacterium damselaesubsp.piscicida (previously known as Pasteurella piscicida) is a gram-negative rod-shaped bacterium that causes disease in fish.
Hosts of Photobacterium damselae subsp. piscicida include:
Pasteurellosis is also described as photobacteriosis (due to the change in the taxonomic position), caused by this halophilic bacterium. It was first isolated in mortalities occurring in natural populations of white perch (Morone americana) and striped bass (M. saxatilis) in 1963 in Chesapeake Bay, USA (Snieszko et al., 1964)[ incomplete short citation ]. Since 1969, this disease has been one of the most important in Japan, affecting mainly yellowtail ( Seriola quinqueradiata ) (Kusuda & Yamaoka, 1972)[ incomplete short citation ]. From 1990 it has caused economic losses in different European countries including France (Baudin-Laurencin et al., 1991)[ incomplete short citation ], Italy (Ceschia et al., 1991)[ incomplete short citation ], Spain (Toranzo et al., 1991)[ incomplete short citation ], Greece (Bakopoulos et al., 1995)[ incomplete short citation ], Turkey (Canand et al., 1996)[ incomplete short citation ], Portugal (Baptista et al., 1996)[ incomplete short citation ] and Malta (Bakopoulos et al., 1997)[ incomplete short citation ]. Gilthead sea bream ( Sparus aurata ), seabass ( Dicentrarchus labrax ) and sole ( Solea spp.) are the most affected species in Europe Mediterranean countries, as well as hybrid striped bass (M. saxatilis x M. chrysops) in the USA. However, the natural hosts of the pathogen are a wide variety of marine fish (Romalde & Magariños, 1997)[ incomplete short citation ].
This pathology is temperature dependent and occurs usually when water temperatures rise above 18-20 °C. Below this temperature, fish can harbour the pathogen as subclinical infection and become carriers for long time periods (Romalde, 2002)[ incomplete short citation ].
Pastereullosis is also known as pseudotubercullosis because it is characterized by the presence, in the chronic form of the disease, of creamy-white granulomatous nodules or whitish tubercules in several internal organs, composed of masses of bacterial cells, epithelial cells, and fibroblasts. The nodules are most prominent in internal viscera, particularly kidney and spleen, and the infection is accompanied by widespread internal necrosis (Evelyn, 1996; Romalde, 2002; Barnes et al., 2005)[ incomplete short citation ]. Anorexia with darkening of the skin as well as focused necrosis of the gills are the only external clinical signs often observed. These lesions are generally missing in the acute form. The disease is difficult to eradicate with antibiotic treatments, and there is evidence that carriers under stressful conditions could suffer from reinfection (Le Breton, 1999).[ incomplete short citation ]
Morphologically, the bacteria is a rod shaped cell, with no motility. Gram negative, with bipolar staining. The presumptive identification of the pathogen is based on standard biochemical tests. In addition, although Ph. damselae subsp. piscicida is not included in the API-20E code index, this miniaturised system can also be useful for its identification, since all strains display the same profile (2005004). Slide agglutination testing using specific antiserum is needed for a confirmative identification of the microorganism (Romalde, 2002).[ incomplete short citation ]
The virulence of the pathogen implies the production of polysaccharide capsular layer, and extracellular products, and is also depending on iron availability (Lopez-Doriga et al., 2000[ incomplete short citation ]). The bacteria spreads via infected phagocytes, mainly macrophages. This spread can be rapid, and lethal effects may occur within a few days of challenge, affecting tissues containing large numbers of the pathogens (Evelyn, 1996).
Salmonella enterica is a rod-shaped, flagellate, facultative anaerobic, Gram-negative bacterium and a species of the genus Salmonella. It is divided into six subspecies, arizonae (IIIa), diarizonae (IIIb), houtenae (IV), salamae (II), indica (VI), and enterica (I). A number of its serovars are serious human pathogens; many of them are serovars of Salmonella enterica subsp. enterica.
Listeria monocytogenes is the species of pathogenic bacteria that causes the infection listeriosis. It is a facultative anaerobic bacterium, capable of surviving in the presence or absence of oxygen. It can grow and reproduce inside the host's cells and is one of the most virulent foodborne pathogens: 20 to 30% of foodborne listeriosis infections in high-risk individuals may be fatal. In the European Union, listeriosis follows an upward trend that began in 2008, causing 2,161 confirmed cases and 210 reported deaths in 2014, 16% more than in 2013. Listeriosis mortality rates are also higher in the EU than for other foodborne pathogens. Responsible for an estimated 1,600 illnesses and 260 deaths in the United States annually, listeriosis ranks third in total number of deaths among foodborne bacterial pathogens, with fatality rates exceeding even Salmonella spp. and Clostridium botulinum.
Lactococcus lactis is a gram-positive bacterium used extensively in the production of buttermilk and cheese, but has also become famous as the first genetically modified organism to be used alive for the treatment of human disease. L. lactis cells are cocci that group in pairs and short chains, and, depending on growth conditions, appear ovoid with a typical length of 0.5 - 1.5 μm. L. lactis does not produce spores (nonsporulating) and are not motile (nonmotile). They have a homofermentative metabolism, meaning they produce lactic acid from sugars. They've also been reported to produce exclusive L-(+)-lactic acid. However, reported D-(−)-lactic acid can be produced when cultured at low pH. The capability to produce lactic acid is one of the reasons why L. lactis is one of the most important microorganisms in the dairy industry. Based on its history in food fermentation, L. lactis has generally recognized as safe (GRAS) status, with few case reports of it being an opportunistic pathogen.
Pantoea stewartii is a species of plant pathogenic bacteria that causes Stewart's wilt of corn, as well as jackfruit-bronzing disease, bacterial leaf wilt of sugarcane, and leaf blight in rice. P. stewartii is a gram-negative bacterium in the Enterobacterales, a group that also includes Escherichia coli and several other human, animal, and plant pathogens. Most research on this bacterial pathogen to date has been done on strains infecting corn as the other diseases have been identified much more recently. Due to being relatively easy to work with in laboratory research, P. stewartii has been used to study a range of processes in bacterial physiology including quorum sensing, bacterial pigment production, endoglucanase enzymes, and siderophore-mediated iron acquisition.
Lysogeny, or the lysogenic cycle, is one of two cycles of viral reproduction. Lysogeny is characterized by integration of the bacteriophage nucleic acid into the host bacterium's genome or formation of a circular replicon in the bacterial cytoplasm. In this condition the bacterium continues to live and reproduce normally, while the bacteriophage lies in a dormant state in the host cell. The genetic material of the bacteriophage, called a prophage, can be transmitted to daughter cells at each subsequent cell division, and later events can release it, causing proliferation of new phages via the lytic cycle.
Aeromonas hydrophila is a heterotrophic, Gram-negative, rod-shaped bacterium mainly found in areas with a warm climate. This bacterium can be found in fresh or brackish water. It can survive in aerobic and anaerobic environments, and can digest materials such as gelatin and hemoglobin. A. hydrophila was isolated from humans and animals in the 1950s. It is the best known of the species of Aeromonas. It is resistant to most common antibiotics and cold temperatures and is oxidase- and indole-positive. Aeromonas hydrophila also has a symbiotic relationship as gut flora inside of certain leeches, such as Hirudo medicinalis.
Photobacterium is a genus of gram-negative, oxidase positive and catalase positive bacteria in the family Vibrionaceae. Members of the genus are bioluminescent, that is they have the ability to emit light.
Pseudomonas viridiflava is a fluorescent, Gram-negative, soil bacterium that is pathogenic to plants. It was originally isolated from the dwarf or runner bean, in Switzerland. Based on 16S rRNA analysis, P. viridiflava has been placed in the P. syringae group. Following ribotypical analysis misidentified strains of Pseudomonas syringae pv. ribicola and Pseudomonas syringae pv. primulae were incorporated into this species. This pathogen causes bacterial blight of Kiwifruit.
Clavibacter michiganensis is an aerobic non-sporulating Gram-positive plant pathogenic actinomycete of the genus Clavibacter. Clavibacter michiganensis has several subspecies. Clavibacter michiganensis subsp. michiganensis causes substantial economic losses worldwide by damaging tomatoes and potatoes.
Pectobacterium carotovorum is a bacterium of the family Pectobacteriaceae; it used to be a member of the genus Erwinia.
Photobacterium profundum is a deep sea Gammaproteobacterium, belonging to the family Vibrionaceae and genus Photobacterium. Like other members of this genus, P. profundum is a marine organism and has two circular chromosomes. P. profundum is a gram-negative rod with the ability for growth at temperatures from 0 °C to 25 °C and pressures from 0.1 MPa to 70 MPa depending on the strain. It has a requirement for salt, is able to metabolise a wide range of simple and complex carbohydrates and has two flagella systems. Cells are rod shape, 2-4μm long and 0.8-1.0μm wide, with a single unsheathed flagella. This bacterium was originally isolated in 1986 from the Sulu Sea and there are currently 4 cultured wild-type strains of P. profundum,.
Aeromonas salmonicida is a pathogenic bacterium that severely impacts salmonid populations and other species. It was first discovered in a Bavarian brown trout hatchery by Emmerich and Weibel in 1894. Aeromonas salmonicida's ability to infect a variety of hosts, multiply, and adapt, make it a prime virulent bacterium. A. salmonicida is an etiological agent for furunculosis, a disease that causes sepsis, haemorrhages, muscle lesions, inflammation of the lower intestine, spleen enlargement, and death in freshwater fish populations. It is found worldwide with the exception of South America. The major route of contamination is poor water quality; however, it can also be associated stress factors such as overcrowding, high temperatures, and trauma. Spawning and smolting fish are prime victims of furunculosis due to their immunocompromised state of being.
Streptococcus iniae is a species of Gram-positive, sphere-shaped bacterium belonging to the genus Streptococcus. Since its isolation from an Amazon freshwater dolphin in the 1970s, S. iniae has emerged as a leading fish pathogen in aquaculture operations worldwide, resulting in over US$100M in annual losses. Since its discovery, S. iniae infections have been reported in at least 27 species of cultured or wild fish from around the world. Freshwater and saltwater fish including tilapia, red drum, hybrid striped bass, and rainbow trout are among those susceptible to infection by S. iniae. Infections in fish manifest as meningoencephalitis, skin lesions, and septicemia.
Edwardsiella tarda is a member of the family Hafniaceae. The bacterium is a facultatively anaerobic, small, motile, gram negative, straight rod with flagella. Infection causes Edwardsiella septicemia in channel catfish, eels, and flounder. Edwardsiella tarda is also found in largemouth bass and freshwater species such as rainbow trout. It is a zoonosis and can infect a variety of animals including fish, amphibians, reptiles, and mammals. Edwardsiella tarda has also been the cause of periodic infections for various animals within zoos. E. tarda has a worldwide distribution and can be found in pond water, mud, and the intestine of fish and other marine animals. It is spread by carrier animal feces.
Betanodavirus, or nervous necrosis virus (NNV), is a genus of nonenveloped positive-strand RNA viruses in the family Nodaviridae. Member viruses infect fish and cause viral nervous necrosis (VNN) and viral encephalopathy and retinopathy (VER). The genus contains four species.
Vibrio tapetis is a Gram-negative, rod-shaped bacterium, the causative agent of the brown ring disease that affects cultured clams. B1090 is the type strain.
Beet vascular necrosis and rot is a soft rot disease caused by the bacterium Pectobacterium carotovorum subsp. betavasculorum, which has also been known as Pectobacterium betavasculorum and Erwinia carotovora subsp. betavasculorum. It was classified in the genus Erwinia until genetic evidence suggested that it belongs to its own group; however, the name Erwinia is still in use. As such, the disease is sometimes called Erwinia rot today. It is a very destructive disease that has been reported across the United States as well as in Egypt. Symptoms include wilting and black streaks on the leaves and petioles. It is usually not fatal to the plant, but in severe cases the beets will become hollowed and unmarketable. The bacteria is a generalist species which rots beets and other plants by secreting digestive enzymes that break down the cell wall and parenchyma tissues. The bacteria thrive in warm and wet conditions, but cannot survive long in fallow soil. However, it is able to persist for long periods of time in the rhizosphere of weeds and non-host crops. While it is difficult to eradicate, there are cultural practices that can be used to control the spread of the disease, such as avoiding injury to the plants and reducing or eliminating application of nitrogen fertilizer.
Tenacibaculum is a Gram-negative and motile bacterial genus from the family of Flavobacteriaceae.
Vibrio tubiashii is a Gram-negative, rod-shaped (0.5 um-1.5 um) marine bacterium that uses a single polar flagellum for motility. It has been implicated in several diseases of marine organisms.
Photobacterium damselae subsp. damselae is a halophilic gram-negative rod-shaped bacterium. Commonly found in marine environments, P.d. subsp. damselae can cause disease in many species marine wildlife and is an emerging threat in aquaculture. In humans Photobacterium damselae subsp. damselae can cause severe infections. The type strain of Photobacterium damselae subsp damselae is ATCC 33539T.
