SOCS5

SOCS5
Available structures PDB Ortholog search: PDBe RCSB List of PDB id codes 2N34
Identifiers
Aliases	SOCS5 , CIS6, CISH6, Cish5, SOCS-5, suppressor of cytokine signaling 5
External IDs	OMIM: 607094; MGI: 2385459; HomoloGene: 10495; GeneCards: SOCS5; OMA:SOCS5 - orthologs
Gene location (Human) Chr. Chromosome 2 (human) [1] Band 2p21 Start 46,698,952 bp [1] End 46,780,245 bp [1]
Gene location (Mouse) Chr. Chromosome 17 (mouse) [2] Band 17|17 E4 Start 87,415,107 bp [2] End 87,445,267 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in sperm buccal mucosa cell endothelial cell germinal epithelium lactiferous duct parietal pleura saphenous vein cerebellar vermis stromal cell of endometrium Epithelium of choroid plexus Top expressed in substantia nigra ventromedial nucleus anterior amygdaloid area nucleus accumbens lateral septal nucleus olfactory tubercle mammillary body globus pallidus lateral hypothalamus subiculum More reference expression data BioGPS n/a
Gene ontology Molecular function epidermal growth factor receptor binding protein kinase inhibitor activity receptor tyrosine kinase binding protein binding 1-phosphatidylinositol-3-kinase regulator activity Cellular component cytoplasm cytosol phosphatidylinositol 3-kinase complex Biological process receptor signaling pathway via JAK-STAT intracellular signal transduction epidermal growth factor receptor signaling pathway negative regulation of epidermal growth factor-activated receptor activity cell growth protein ubiquitination regulation of growth positive regulation of proteasomal ubiquitin-dependent protein catabolic process negative regulation of receptor signaling pathway via JAK-STAT negative regulation of T-helper 2 cell differentiation positive regulation of T-helper 1 cell differentiation negative regulation of signal transduction negative regulation of interleukin-6 production negative regulation of inflammatory response cellular response to low-density lipoprotein particle stimulus negative regulation of monocyte chemotactic protein-1 production vascular endothelial cell response to fluid shear stress post-translational protein modification cytokine-mediated signaling pathway regulation of phosphatidylinositol 3-kinase activity phosphatidylinositol phosphate biosynthetic process Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 9655 56468 Ensembl ENSG00000171150 ENSMUSG00000037104 UniProt O75159 O54928 RefSeq (mRNA) NM_144949 NM_014011 NM_019654 RefSeq (protein) NP_054730 NP_659198 NP_062628 Location (UCSC) Chr 2: 46.7 – 46.78 Mb Chr 17: 87.42 – 87.45 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Suppressor of cytokine signaling 5 is a protein that in humans is encoded by the SOCS5 gene. ^{[5] [6] [7]}

The protein encoded by this gene contains a SH2 domain and a SOCS BOX domain. The protein thus belongs to the suppressor of cytokine signaling (SOCS) family, also known as STAT-induced STAT inhibitor (SSI) protein family. SOCS family members are known to be cytokine-inducible negative regulators of cytokine signaling. The specific function of this protein has not yet been determined. Two alternatively spliced transcript variants encoding an identical protein have been reported. ^[7]

References

1. GRCh38: Ensembl release 89: ENSG00000171150 – Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000037104 – Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. Ishikawa K, Nagase T, Suyama M, Miyajima N, Tanaka A, Kotani H, Nomura N, Ohara O (Dec 1998). "Prediction of the coding sequences of unidentified human genes. X. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro". DNA Res. 5 (3): 169–76. doi: 10.1093/dnares/5.3.169 . PMID   9734811.
6. Wiemann S, Weil B, Wellenreuther R, Gassenhuber J, Glassl S, Ansorge W, Bocher M, Blocker H, Bauersachs S, Blum H, Lauber J, Dusterhoft A, Beyer A, Kohrer K, Strack N, Mewes HW, Ottenwalder B, Obermaier B, Tampe J, Heubner D, Wambutt R, Korn B, Klein M, Poustka A (Mar 2001). "Toward a Catalog of Human Genes and Proteins: Sequencing and Analysis of 500 Novel Complete Protein Coding Human cDNAs". Genome Res. 11 (3): 422–35. doi:10.1101/gr.GR1547R. PMC   311072 . PMID   11230166.
7. "Entrez Gene: SOCS5 suppressor of cytokine signaling 5".

Further reading

• Kile BT, Schulman BA, Alexander WS, et al. (2002). "The SOCS box: a tale of destruction and degradation". Trends Biochem. Sci. 27 (5): 235–41. doi:10.1016/S0968-0004(02)02085-6. PMID   12076535.
• Wang J, Campbell IL (2002). "Cytokine signaling in the brain: putting a SOCS in it?". J. Neurosci. Res. 67 (4): 423–7. doi: 10.1002/jnr.10145 . PMID   11835308. S2CID   33269663.
• Krebs DL, Hilton DJ (2001). "SOCS proteins: negative regulators of cytokine signaling". Stem Cells. 19 (5): 378–87. doi: 10.1634/stemcells.19-5-378 . PMID   11553846. S2CID   20847942.
• Ozaki A, Seki Y, Fukushima A, Kubo M (2005). "The control of allergic conjunctivitis by suppressor of cytokine signaling (SOCS)3 and SOCS5 in a murine model". J. Immunol. 175 (8): 5489–97. doi: 10.4049/jimmunol.175.8.5489 . PMID   16210657.
• Kario E, Marmor MD, Adamsky K, et al. (2005). "Suppressors of cytokine signaling 4 and 5 regulate epidermal growth factor receptor signaling". J. Biol. Chem. 280 (8): 7038–48. doi: 10.1074/jbc.M408575200 . PMID   15590694.
• Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC   528928 . PMID   15489334.
• Bayle J, Letard S, Frank R, et al. (2004). "Suppressor of cytokine signaling 6 associates with KIT and regulates KIT receptor signaling". J. Biol. Chem. 279 (13): 12249–59. doi: 10.1074/jbc.M313381200 . PMID   14707129.
• Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi: 10.1073/pnas.242603899 . PMC   139241 . PMID   12477932.
• Seki Y, Hayashi K, Matsumoto A, et al. (2002). "Expression of the suppressor of cytokine signaling-5 (SOCS5) negatively regulates IL-4-dependent STAT6 activation and Th2 differentiation". Proc. Natl. Acad. Sci. U.S.A. 99 (20): 13003–8. Bibcode:2002PNAS...9913003S. doi: 10.1073/pnas.202477099 . PMC   130576 . PMID   12242343.
• Magrangeas F, Apiou F, Denis S, et al. (2000). "Cloning and expression of CIS6, chromosome assignment to 3p22 and 2p21 by in situ hybridization". Cytogenet. Cell Genet. 88 (1–2): 78–81. doi:10.1159/000015490. PMID   10773671. S2CID   19983548.
• Hilton DJ, Richardson RT, Alexander WS, et al. (1998). "Twenty proteins containing a C-terminal SOCS box form five structural classes". Proc. Natl. Acad. Sci. U.S.A. 95 (1): 114–9. Bibcode:1998PNAS...95..114H. doi: 10.1073/pnas.95.1.114 . PMC   18144 . PMID   9419338.