Sulfolobus tokodaii

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Sulfolobus tokodaii
Scientific classification
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S. tokodaii
Binomial name
Sulfolobus tokodaii
Suzuki et al. 2002
Synonyms

Sulfolobus tokodaii is a thermophilic archaeon. It is acidophilic and obligately aerobic. The type strain is 7 (JCM 10545). [1] Its genome has been sequenced. [2]

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<span class="mw-page-title-main">Thermoproteota</span> Phylum of archaea

The Thermoproteota are prokaryotes that have been classified as a phylum of the Archaea domain. Initially, the Thermoproteota were thought to be sulfur-dependent extremophiles but recent studies have identified characteristic Thermoproteota environmental rRNA indicating the organisms may be the most abundant archaea in the marine environment. Originally, they were separated from the other archaea based on rRNA sequences; other physiological features, such as lack of histones, have supported this division, although some crenarchaea were found to have histones. Until recently all cultured Thermoproteota had been thermophilic or hyperthermophilic organisms, some of which have the ability to grow at up to 113 °C. These organisms stain Gram negative and are morphologically diverse, having rod, cocci, filamentous and oddly-shaped cells.

<i>Sulfolobus</i> Genus of archaea

Sulfolobus is a genus of microorganism in the family Sulfolobaceae. It belongs to the archaea domain.

<span class="mw-page-title-main">Thermoacidophile</span> Microorganisms which live in water with high temperature and high acidity

A thermoacidophile is an extremophilic microorganism that is both thermophilic and acidophilic; i.e., it can grow under conditions of high temperature and low pH. The large majority of thermoacidophiles are archaea or bacteria, though occasional eukaryotic examples have been reported. Thermoacidophiles can be found in hot springs and solfataric environments, within deep sea vents, or in other environments of geothermal activity. They also occur in polluted environments, such as in acid mine drainage.

<span class="mw-page-title-main">Sulfolobaceae</span> Family of archaea

Sulfolobaceae are a family of the Sulfolobales belonging to the domain Archaea. The family consists of several genera adapted to survive environmental niches with extreme temperature and low pH conditions.

Pyrobaculum is a genus of the Thermoproteaceae.

Aeropyrum pernix is a species of extremophile archaea in the archaeal phylum Thermoproteota. It is an obligatorily thermophilic species. The first specimens were isolated from sediments in the sea off the coast of Japan.

Icerudivirus is a genus of viruses in the family Rudiviridae. These viruses are non-enveloped, stiff-rod-shaped viruses with linear dsDNA genomes, that infect hyperthermophilic archaea of the species Sulfolobus islandicus. There are three species in the genus.

Thermoplasma acidophilum is an archaeon, the type species of its genus. T. acidophilum was originally isolated from a self-heating coal refuse pile, at pH 2 and 59 °C. Its genome has been sequenced.

Sulfolobus metallicus is a coccoid shaped thermophilic archaeon. It is a strict chemolithoautotroph gaining energy by oxidation of sulphur and sulphidic ores into sulfuric acid. Its type strain is Kra 23. It has many uses that take advantage of its ability to grow on metal media under acidic and hot environments.

Picrophilus torridus is a species of Archaea described in 1996. Picrophilus torridus was found in soil near a hot spring in Hokkaido, Japan. The pH of the soil was less than 0.5. P. torridus also has one of the smallest genomes found among organisms that are free-living and are non-parasitic and a high coding density, meaning that the majority of its genes are coding regions and provide instructions for building proteins. The current research suggests the two hostile conditions favored by P. torridus have exerted selective pressure towards having a small and compact genome, which is less likely to be damaged by the harsh environment.

Thermococcus barophilus is a piezophilic and hyperthermophilic archaeon isolated from a deep-sea hydrothermal vent. It is anaerobic and sulfur-metabolising, with type strain MPT.

Halobacterium noricense is a halophilic, rod-shaped microorganism that thrives in environments with salt levels near saturation. Despite the implication of the name, Halobacterium is actually a genus of archaea, not bacteria. H. noricense can be isolated from environments with high salinity such as the Dead Sea and the Great Salt Lake in Utah. Members of the Halobacterium genus are excellent model organisms for DNA replication and transcription due to the stability of their proteins and polymerases when exposed to high temperatures. To be classified in the genus Halobacterium, a microorganism must exhibit a membrane composition consisting of ether-linked phosphoglycerides and glycolipids.

Saccharolobus solfataricus is a species of thermophilic archaeon. It was transferred from the genus Sulfolobus to the new genus Saccharolobus with the description of Saccharolobus caldissimus in 2018.

Sulfolobus acidocaldarius is a thermoacidophilic archaeon that belongs to the phylum Thermoproteota. S. acidocaldarius was the first Sulfolobus species to be described, in 1972 by Thomas D. Brock and collaborators. This species was found to grow optimally between 75 and 80 °C, with pH optimum in the range of 2-3.

Metallosphaera sedula is a species of Metallosphaera that is originally isolated from a volcanic field in Italy. Metallosphaera sedula can be roughly translated into “metal mobilizing sphere” with the word “sedulus” meaning busy, describing its efficiency in mobilizing metals. M. sedula is a highly thermoacidophilic Archaean that is unusually tolerant of heavy metals.

Acidilobus saccharovorans is a thermoacidophilic species of anaerobic archaea. The species was originally described in 2009 after being isolated from hot springs in Kamchatka.

Metallosphaera hakonensis is a gram-negative, thermoacidophilic archaea discovered in the hot springs of Hakone National Park, Kanagawa, Japan.

Sulfurisphaera tokodaii is a thermophilic archaeon of the Thermoproteota phylum. This species lives can grow as a chemoheterotroph and a lithoautotroph

Halorubrum kocurii is a halophilic archaean belonging to the genus Halorubrum. This genus contains a total of thirty-seven different species, all of which thrive in high-salinity environments. Archaea belonging to this genus are typically found in hypersaline environments due to their halophilic nature, specifically in solar salterns. Halorubrum kocurii is a rod-shaped, Gram-negative archaeon. Different from its closest relatives, Halorubrum kocurii is non-motile and contains no flagella or cilia. This archaeon thrives at high pH levels, high salt concentrations, and moderate temperatures. It has a number of close relatives, including Halorubrum aidingense, Halorubrum lacusprofundi, and more.

References

  1. Suzuki, Toshiharu; Iwasaki, Toshio; Uzawa, Taketoshi; Hara, Kurt; Nemoto, Naoki; Kon, Takahide; Ueki, Toshiaki; Yamagishi, Akihiko; Oshima, Tairo (2002). "Sulfolobus tokodaii sp. nov. (f. Sulfolobus sp. strain 7), a new member of the genus Sulfolobus isolated from Beppu Hot Springs, Japan". Extremophiles. 6 (1): 39–44. doi:10.1007/s007920100221. ISSN   1431-0651. PMID   11878560. S2CID   20951692.
  2. Kawarabayasi Y; Hino Y; Horikawa H; Jin-no K; Takahashi M; Sekine M; et al. (2001). "Complete genome sequence of an aerobic thermoacidophilic crenarchaeon, Sulfolobus tokodaii strain7". DNA Res. 8 (4): 123–40. doi: 10.1093/dnares/8.4.123 . PMID   11572479.

Further reading