Orthohepevirus A

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Orthohepevirus A
Hepatitis E virus.jpg
TEM micrograph of Orthohepevirus A virions
Virus classification OOjs UI icon edit-ltr.svg
(unranked): Virus
Realm: Riboviria
Kingdom: Orthornavirae
Phylum: Kitrinoviricota
Class: Alsuviricetes
Order: Hepelivirales
Family: Hepeviridae
Genus: Orthohepevirus
Species:
Orthohepevirus A
Synonyms [1]
  • Hepatitis E virus

The hepatitis E virus (HEV) is the causative agent of hepatitis E. It is of the species Orthohepevirus A. [a] [2] [1]

Contents

Globally, approximately 939 million corresponding to 1 in 8 individuals have ever experienced HEV infection. About 15–110 million individuals have recent or ongoing HEV infection. [3] The virus particle was first seen in 1983, [4] but was only molecularly cloned in 1989. [5]

Genome and proteome

Orthohepevirus A can be classified into eight different genotypes from different geographical regions: genotype 1 (Asia), genotype 2 (Africa and Mexico), genotype 3 (Europe and North America), genotype 4 (Asia); genotypes 5 and 6 have been detected in Asian wild boar and genotypes 7 and 8 in camels. [2] [6]

The viral genome is a single strand of positive-sense RNA that is about 7200 bases in length. The three open reading frames (ORF1, ORF2 and ORF3) encode for three proteins (O1, O2, O3), two of which are polyproteins, that is, they are cleaved into fragments which carry out the actual functions of the virus (see figure). The O1 protein consists of seven such fragments, namely Met (methyltransferase), Y (Y-domain), Plp (papain-like protease), V (proline-rich variable region), X (X-domain, macro-domain), Hel (helicase), and Rdrp (RNA-dependent RNA polymerase). The Pvx domain is a fusion protein consisting of the Plp, V, and X domains. The O3 protein is encoded by a single open-reading frame (ORF3). The O2 protein encodes the capsid, which is composed of three domains, namely the shell domain (S) and two protruding domains (P1, P2). [7] Numbers in the figure indicate positions in the RNA sequence.

Hepatitis E Virus genome and encoded proteins.png

Interactome

The protein-protein interactome among Orthohepevirus A proteins has been mapped by Osterman et al. (2015), who found 25 interactions among the 10 proteins studied. Almost all (24) of these interactions were considered as of "high quality". [8]

Structure

The viral particles are 27 to 34 nanometers in diameter and are not enveloped. [2] [4] Although not enveloped, it does have a isosahedral shaped capsid to ensure protection of it's RNA genome, and additionally playing a role in the virus's attachment and entry into the host. [9]

Taxonomy

It was previously classified in the family Caliciviridae . However, its genome more closely resembles rubella virus. It is now classified as a member of the genus Orthohepevirus in the family Hepeviridae . [2]

Evolution

The strains of HEV that exist today may have arisen from a shared ancestor virus 536 to 1344 years ago. [10] Another analysis has dated the origin of Hepatitis E to ~6000 years ago, with a suggestion that this was associated with domestication of pigs. [11] At some point, two clades may have diverged — an anthropotropic form and an enzootic form — which subsequently evolved into genotypes 1 and 2 and genotypes 3 and 4, respectively. [12]

Whereas genotype 2 remains less commonly detected than other genotypes, genetic evolutionary analyses suggest that genotypes 1, 3, and 4 have spread substantially during the past 100 years. [13]

See also

Notes

  1. The former species name was Hepatitis E virus. [1]

Related Research Articles

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<i>Parvoviridae</i> Family of viruses

Parvoviruses are a family of animal viruses that constitute the family Parvoviridae. They have linear, single-stranded DNA (ssDNA) genomes that typically contain two genes encoding for a replication initiator protein, called NS1, and the protein the viral capsid is made of. The coding portion of the genome is flanked by telomeres at each end that form into hairpin loops that are important during replication. Parvovirus virions are small compared to most viruses, at 23–28 nanometers in diameter, and contain the genome enclosed in an icosahedral capsid that has a rugged surface.

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<span class="mw-page-title-main">Hepatitis A</span> Acute infectious disease of the liver

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<span class="mw-page-title-main">Hepatitis E</span> Human disease caused by Orthohepevirus A

Hepatitis E is inflammation of the liver caused by infection with the hepatitis E virus (HEV); it is a type of viral hepatitis. Hepatitis E has mainly a fecal-oral transmission route that is similar to hepatitis A, although the viruses are unrelated. HEV is a positive-sense, single-stranded, nonenveloped, RNA icosahedral virus and one of five known human hepatitis viruses: A, B, C, D, and E.

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<span class="mw-page-title-main">Sedoreoviridae</span> Family of viruses

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<span class="mw-page-title-main">Rubella virus</span> Species of virus

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<i>Orthohepevirus</i> Genus of viruses

Orthohepevirus is a genus of viruses assigned to the family Hepeviridae. Orthohepevirus is a fairly isolated viral genus in which the virions are characterized by round, non-enveloped and isometric capsids with a diameter of 27–34 nm. The hepatitis E virus belongs this genus as the species Orthohepevirus A

<i>Hepeviridae</i> Family of viruses

Hepeviridae is a family of viruses. Human, pig, wild boar, sheep, cow, camel, monkey, some rodents, bats and chickens serve as natural hosts. There are two genera in the family. Diseases associated with this family include: hepatitis; high mortality rate during pregnancy; and avian hepatitis E virus is the cause of hepatitis-splenomegaly (HS) syndrome among chickens.

<i>Potyviridae</i> Family of viruses

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<span class="mw-page-title-main">Astrovirus</span> Family of viruses

Astroviruses (Astroviridae) are a type of virus that was first discovered in 1975 using electron microscopes following an outbreak of diarrhea in humans. In addition to humans, astroviruses have now been isolated from numerous mammalian animal species and from avian species such as ducks, chickens, and turkey poults. Astroviruses are 28–35 nm diameter, icosahedral viruses that have a characteristic five- or six-pointed star-like surface structure when viewed by electron microscopy. Along with the Picornaviridae and the Caliciviridae, the Astroviridae comprise a third family of nonenveloped viruses whose genome is composed of plus-sense, single-stranded RNA. Astrovirus has a non-segmented, single stranded, positive sense RNA genome within a non-enveloped icosahedral capsid. Human astroviruses have been shown in numerous studies to be an important cause of gastroenteritis in young children worldwide. In animals, Astroviruses also cause infection of the gastrointestinal tract but may also result in encephalitis, hepatitis (avian) and nephritis (avian).

<i>Murine coronavirus</i> Species of virus

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<i>Woolly monkey hepatitis B virus</i> Species of virus

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References

  1. 1 2 3 Purdy, Michael A.; et al. (June 2014). "New Classification Scheme for Hepeviridae" (PDF). International Committee on Taxonomy of Viruses (ICTV). Retrieved 1 May 2019. The species Hepatitis E virus will be renamed Orthohepevirus A, and the species Avian hepatitis E virus will be renamed Orthohepevirus B.
  2. 1 2 3 4 "Hepeviridae - Hepeviridae - Positive-sense RNA Viruses - ICTV". www.ictv.global.
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  4. 1 2 Balayan MS, Andjaparidze AG, Savinskaya SS, et al. (1983). "Evidence for a virus in non-A, non-B hepatitis transmitted via the fecal-oral route". Intervirology. 20 (1): 23–31. doi:10.1159/000149370. PMID   6409836.
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  12. Mirazo S, Mir D, Bello G, Ramos N, Musto H, Arbiza J (2016). "New insights into the hepatitis E virus genotype 3 phylodynamics and evolutionary history". Infect Genet Evol. 43: 267–73. Bibcode:2016InfGE..43..267M. doi:10.1016/j.meegid.2016.06.003. PMID   27264728.{{cite journal}}: CS1 maint: multiple names: authors list (link)
  13. Izopet J, Abravanel F, Dalton H, Nassim RK (2014) Hepatitis E Virus Infection. Clin Micro Reviews 27 (1) 116–138