ABCA7

Last updated
ABCA7
Identifiers
Aliases ABCA7 , ABCA-SSN, ABCX, AD9, ATP binding cassette subfamily A member 7
External IDs OMIM: 605414 MGI: 1351646 HomoloGene: 22783 GeneCards: ABCA7
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_019112
NM_033308

NM_013850
NM_001347081

RefSeq (protein)

NP_061985

NP_001334010
NP_038878

Location (UCSC) Chr 19: 1.04 – 1.07 Mb Chr 10: 79.83 – 79.85 Mb
PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

ATP-binding cassette sub-family A member 7 is a protein that in humans is encoded by the ABCA7 gene. [5]

Contents

Function

The protein encoded by this gene is a member of the superfamily of ATP-binding cassette (ABC) transporters. ABC proteins transport various molecules across extra- and intra-cellular membranes. ABC genes are divided into seven distinct subfamilies: ABC1, MDR/TAP, CFTR/MRP, ALD (adrenoleukodystrophy), OABP, GCN20, and White. This protein is a member of the ABC1 subfamily. Members of the ABC1 subfamily comprise the only major ABC subfamily found exclusively in multicellular eukaryotes. This full transporter has been detected predominantly in myelo-lymphatic tissues with the highest expression in peripheral leukocytes, thymus, spleen, and bone marrow. The function of this protein is not yet known; however, the expression pattern suggests a role in lipid homeostasis in cells of the immune system. Alternative splicing of this gene results in two transcript variants. [5]

Lack of ABCA7 gene exhibits phenotypes in mice, such as moderate decrease in plasma HDL and adipose tissues only in female, while release of cellular cholesterol and phospholipid is not impaired. [6] Accordingly, decrease in plasma lectin level was also reported. [7] Reduction of CD3 or CD1d may lead to dysfunction of T cells by deletion of ABCA7. [8] [9]

On the other hand, transfected and expressed ABCA7, but not endogenous ABCA7, mediates release of cell phospholipid and cholesterol to generate HDL-like particles but contain less cholesterol than those generated by ABCA1. [10] [11] ABCA7-generated HDL is smaller and appears as a single peak in a molecular sieve HPLC analysis in comparison to HDL generated by ABCA1 that shows twin peaks of small and poor in cholesterol and large and rich in cholesterol. [12] [13] ABCA7 mRNA generates full length cDNA and a spliced form of cDNA, and only the former is capable of generating HDL when transfected. [14]

ABCA7 was shown associated with cellular phagocytotic activity. [15] [16] The promoter of ABCA7 contains sterol regulatory element (SRE) so that ABCA7 is down-regulated by cell cholesterol through sterol regulatory element binding protein (SREBP) 2. [15] Therefore, ABCA7 expression and phagocytosis are up-regulated by use of HMG-reductase inhibitors (statins). [17] In addition, ABCA7 is stabilized like ABCA1 by helical apolipoproteins such as apoA-I, [18] [19] [20] and phagocytosis is accordingly increased in such a condition. [20]

In summary, ABCA7 is a substantially related protein to ABCA1 but it does not mediate cell cholesterol release by generation of HDL unless it is externally transfected and expressed in vitro. ABCA7 is shown associated with cellular phagocytotic function in vivo and in vitro, and expression of the ABCA7 gene is regulated by cell cholesterol mainly through the SRE/SREBP system in a negative feed-back fashion in contrast to positive feedback by the LXR/RXR system for ABCA1. [21] ABCA7 thus links cholesterol metabolism to host defense system.

Clinical significance

In 2011, two genome-wide association studies (GWAS) identified ABCA7 as a new susceptibility locus for late-onset Alzheimer's disease. [22] [23] The finding was also confirmed by other meta-analysis investigations later. [24] [25] Such association of ABCA7 variants was reported on more specific findings of the disease such as memory decline and incident mild cognitive impairment [26] or cortical and hippocampal atrophy. [27] [28]

Protein-disrupting variants in ABCA7 have been shown to predispose to Alzheimer's disease. [29] The Icelandic database of Decode Genetics has shown a doubled probability of developing Alzheimer's disease when inactive variants of the ABCA7 gene are present. [30]

By using the knock-out mice, ABCA7 was indicated involved in generation and processing of amyloid β (Aβ) peptides. In the brain of the amyloid precursor protein transgenic mice, deletion of ABCA7 resulted in accumulation of Aβ40 and Aβ42 in the early stage [31] apparently by accelerating Aβ production. [31] [32] More rapid endocytosis of amyloid precursor protein was observed in primary microglia from ABCA7 deficient mice. [31] Roles of ABCA7 are also implicated for microglial phagocytotic function [33] and immune responses. [34] [13] Although the direct target of ABCA7 function is unclear, the findings are so far mechanistically consistent with the increased Aβ production.

The data can be summarized as 1) loss of function of ABCA7 is associated with a risk for late onset Alzheimer's disease, 2) one of its molecular backgrounds can be enhanced production/decreased processing of Aβ peptides, and 3) ABCA7 is at least shown to increase phagocytosis including that of microglia. Since ABCA7 gene is down-regulated by cell cholesterol via the SRE/SREBP system, [15] the data accumulated are consistent with clinical implication that use of statins, HMG-CoA reductase inhibitors, reduces risk for Alzheimer's disease. [35]

See also

Notes

Related Research Articles

<span class="mw-page-title-main">ATP-binding cassette transporter</span> Gene family

The ATP-binding cassette transporters are a transport system superfamily that is one of the largest and possibly one of the oldest gene families. It is represented in all extant phyla, from prokaryotes to humans. ABC transporters belong to translocases.

<span class="mw-page-title-main">Amyloid beta</span> Group of peptides

Amyloid beta denotes peptides of 36–43 amino acids that are the main component of the amyloid plaques found in the brains of people with Alzheimer's disease. The peptides derive from the amyloid-beta precursor protein (APP), which is cleaved by beta secretase and gamma secretase to yield Aβ in a cholesterol-dependent process and substrate presentation. Aβ molecules can aggregate to form flexible soluble oligomers which may exist in several forms. It is now believed that certain misfolded oligomers can induce other Aβ molecules to also take the misfolded oligomeric form, leading to a chain reaction akin to a prion infection. The oligomers are toxic to nerve cells. The other protein implicated in Alzheimer's disease, tau protein, also forms such prion-like misfolded oligomers, and there is some evidence that misfolded Aβ can induce tau to misfold.

<span class="mw-page-title-main">ABCA12</span> Protein-coding gene in the species Homo sapiens

ATP-binding cassette sub-family A member 12 also known as ATP-binding cassette transporter 12 is a protein that in humans is encoded by the ABCA12 gene.

Tangier disease or hypoalphalipoproteinemia is an extremely rare inherited disorder characterized by a severe reduction in the amount of high density lipoprotein (HDL), often referred to as "good cholesterol", in the bloodstream. Worldwide, approximately 100 cases have even been identified.

The biochemistry of Alzheimer's disease, the most common cause of dementia, is not yet very well understood. Alzheimer's disease (AD) has been identified as a proteopathy: a protein misfolding disease due to the accumulation of abnormally folded amyloid beta (Aβ) protein in the brain. Amyloid beta is a short peptide that is an abnormal proteolytic byproduct of the transmembrane protein amyloid-beta precursor protein (APP), whose function is unclear but thought to be involved in neuronal development. The presenilins are components of proteolytic complex involved in APP processing and degradation.

<span class="mw-page-title-main">ABCA1</span> Mammalian protein found in Homo sapiens

ATP-binding cassette transporter ABCA1, also known as the cholesterol efflux regulatory protein (CERP) is a protein which in humans is encoded by the ABCA1 gene. This transporter is a major regulator of cellular cholesterol and phospholipid homeostasis.

<span class="mw-page-title-main">ABCC1</span> Protein-coding gene in the species Homo sapiens

Multidrug resistance-associated protein 1 (MRP1) is a protein that in humans is encoded by the ABCC1 gene.

<span class="mw-page-title-main">ABCA4</span> Mammalian protein found in Homo sapiens

ATP-binding cassette, sub-family A (ABC1), member 4, also known as ABCA4 or ABCR, is a protein which in humans is encoded by the ABCA4 gene.

<span class="mw-page-title-main">ABCG1</span> Mammalian protein found in Homo sapiens

ATP-binding cassette sub-family G member 1 is a protein that in humans is encoded by the ABCG1 gene. It is a homolog of the well-known Drosophila gene white.

<span class="mw-page-title-main">ABCG5</span> Protein-coding gene in the species Homo sapiens

ATP-binding cassette sub-family G member 5 is a protein that in humans is encoded by the ABCG5 gene.

<span class="mw-page-title-main">ABCG8</span> Protein-coding gene in the species Homo sapiens

ATP-binding cassette sub-family G member 8 is a protein that in humans is encoded by the ABCG8 gene.

<span class="mw-page-title-main">ABCA2</span> Protein-coding gene in the species Homo sapiens

ATP-binding cassette sub-family A member 2 is a protein that in humans is encoded by the ABCA2 gene.

<span class="mw-page-title-main">ABCA3</span> Protein-coding gene in the species Homo sapiens

ATP-binding cassette sub-family A member 3 is a protein that in humans is encoded by the ABCA3 gene.

<span class="mw-page-title-main">ABCD4</span> Protein-coding gene in the species Homo sapiens

ATP-binding cassette sub-family D member 4 is a protein that in humans is encoded by the ABCD4 gene.

<span class="mw-page-title-main">ABCG4</span> Protein-coding gene in the species Homo sapiens

ATP-binding cassette sub-family G member 4 is a protein that in humans is encoded by the ABCG4 gene.

<span class="mw-page-title-main">ABCA8</span> Protein-coding gene in the species Homo sapiens

ATP-binding cassette sub-family A member 8 is a protein that in humans is encoded by the ABCA8 gene.

<span class="mw-page-title-main">ABCA9</span> Protein-coding gene in the species Homo sapiens

ATP-binding cassette sub-family A member 9 is a protein that in humans is encoded by the ABCA9 gene.

miR-33 Non-coding RNA in the species Homo sapiens

miR-33 is a family of microRNA precursors, which are processed by the Dicer enzyme to give mature microRNAs. miR-33 is found in several animal species, including humans. In some species there is a single member of this family which gives the mature product mir-33. In humans there are two members of this family called mir-33a and mir-33b, which are located in intronic regions within two protein-coding genes for Sterol regulatory element-binding proteins respectively.

<span class="mw-page-title-main">ABCA5</span> Protein-coding gene in the species Homo sapiens

ATP-binding cassette, sub-family A (ABC1), member 5 is a protein that in humans is encoded by the ABCA5 gene.

Alzheimer's disease (AD) in the Hispanic/Latino population is becoming a topic of interest in AD research as Hispanics and Latinos are disproportionately affected by Alzheimer's Disease and underrepresented in clinical research. AD is a neurodegenerative disease, characterized by the presence of amyloid-beta plaques and neurofibrillary tangles, that causes memory loss and cognitive decline in its patients. However, pathology and symptoms have been shown to manifest differently in Hispanic/Latinos, as different neuroinflammatory markers are expressed and cognitive decline is more pronounced. Additionally, there is a large genetic component of AD, with mutations in the amyloid precursor protein (APP), Apolipoprotein E APOE), presenilin 1 (PSEN1), bridging Integrator 1 (BIN1), SORL1, and Clusterin (CLU) genes increasing one's risk to develop the condition. However, research has shown these high-risk genes have a different effect on Hispanics and Latinos then they do in other racial and ethnic groups. Additionally, this population experiences higher rates of comorbidities, that increase their risk of developing AD. Hispanics and Latinos also face socioeconomic and cultural factors, such as low income and a language barrier, that affect their ability to engage in clinical trials and receive proper care.

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Further reading

This article incorporates text from the United States National Library of Medicine, which is in the public domain.