| Epsilonretrovirus | |
|---|---|
Virus classification  | |
| (unranked): | Virus |
| Realm: | Riboviria |
| Kingdom: | Pararnavirae |
| Phylum: | Artverviricota |
| Class: | Revtraviricetes |
| Order: | Ortervirales |
| Family: | Retroviridae |
| Subfamily: | Orthoretrovirinae |
| Genus: | Epsilonretrovirus |
| Species [1] | |
Epsilonretrovirus is a waterborn genus of the Retroviridae family. [2] It infects fish. The species include Walleye dermal sarcoma virus , and Walleye epidermal hyperplasia virus 1 and 2 .[ citation needed ]
A DNA virus is a virus that has a genome made of deoxyribonucleic acid (DNA) that is replicated by a DNA polymerase. They can be divided between those that have two strands of DNA in their genome, called double-stranded DNA (dsDNA) viruses, and those that have one strand of DNA in their genome, called single-stranded DNA (ssDNA) viruses. dsDNA viruses primarily belong to two realms: Duplodnaviria and Varidnaviria, and ssDNA viruses are almost exclusively assigned to the realm Monodnaviria, which also includes some dsDNA viruses. Additionally, many DNA viruses are unassigned to higher taxa. Reverse transcribing viruses, which have a DNA genome that is replicated through an RNA intermediate by a reverse transcriptase, are classified into the kingdom Pararnavirae in the realm Riboviria.
The walleye, also called the yellow pike or yellow pikeperch or yellow pickerel, is a freshwater perciform fish native to most of Canada and to the Northern United States. It is a North American close relative of the European zander, also known as the pikeperch. The walleye is sometimes called the yellow walleye to distinguish it from the blue walleye, which is a color morph that was once found in the southern Ontario and Quebec regions, but is now presumed extinct. However, recent genetic analysis of a preserved (frozen) 'blue walleye' sample suggests that the blue and yellow walleye were simply phenotypes within the same species and do not merit separate taxonomic classification.
Virus classification is the process of naming viruses and placing them into a taxonomic system similar to the classification systems used for cellular organisms.
Arteriviridae is a family of enveloped, positive-strand RNA viruses in the order Nidovirales which infect vertebrates. Host organisms include equids, pigs, Possums, nonhuman primates, and rodents. The family includes, for example, equine arteritis virus in horses which causes mild-to-severe respiratory disease and reproductive failure, porcine reproductive and respiratory syndrome virus type 1 and type 2 in pigs which causes a similar disease, simian hemorrhagic fever virus which causes a highly lethal fever, lactate dehydrogenase–elevating virus which affects mice, and wobbly possum disease virus.
The International Committee on Taxonomy of Viruses (ICTV) authorizes and organizes the taxonomic classification of and the nomenclatures for viruses. The ICTV has developed a universal taxonomic scheme for viruses, and thus has the means to appropriately describe, name, and classify every virus that affects living organisms. The members of the International Committee on Taxonomy of Viruses are considered expert virologists. The ICTV was formed from and is governed by the Virology Division of the International Union of Microbiological Societies. Detailed work, such as delimiting the boundaries of species within a family, typically is performed by study groups of experts in the families.
Marnaviridae is a family of positive-stranded RNA viruses in the order Picornavirales. The first species of this family that was isolated is Heterosigma akashiwo RNA virus (HaRNAV) in the genus Marnavirus, that infects the toxic bloom-forming Raphidophyte alga, Heterosigma akashiwo. Using a sequence-based framework an additional twenty marine RNA viruses have been added to the family.
The walleye epidermal hyperplasia viruses are two species of retroviruses classified under Epsilonretrovirus, a genus in the family of Retroviridae. There are three genome sequenced and identified exogenous retroviruses of this genus which include two known types associated with walleye epidermal hyperplasia disease. Both viral types are confirmed to be the causative agents of the neoplastic condition in the freshwater fish species, the North American walleye (Sander vitreus). The specific association of retroviral infection with proliferative lesions in fish is based on the presence of retrovirus-like particles and reverse transcriptase activity from neoplastic tissue. Although both virus types have been observed in lesions of diseased fish, each cell of the infected tissue is host to a specific virus. Transmission studies have also shown that WEHV-2 has been the more proliferative agent of the condition as compared to WEHV-1.
Sandra L. Quackenbush is an American virologist working as an associate professor of retrovirology at the Colorado State University College of Veterinary Medicine and Biomedical Sciences. Quackenbush also serves as the associate head of graduate education for the Microbiology, Immunology & Pathology Department within the college. Her research interests include viral pathogenesis, with emphasis in viral-induced oncogenesis.
Hantaviridae is a family of viruses in the order Bunyavirales. It is named for the Hantan River area in South Korea where an early outbreak of one of its species was observed.
Articulavirales is an order of segmented negative-strand RNA viruses which infect invertebrates and vertebrates. It includes the family of influenza viruses which infect humans. It is the only order of viruses in the monotypic class Insthoviricetes. The order contains two families and eight genera.
Riboviria is a realm of viruses that includes all viruses that use a homologous RNA-dependent polymerase for replication. It includes RNA viruses that encode an RNA-dependent RNA polymerase, as well as reverse-transcribing viruses that encode an RNA-dependent DNA polymerase. RNA-dependent RNA polymerase (RdRp), also called RNA replicase, produces RNA from RNA. RNA-dependent DNA polymerase (RdDp), also called reverse transcriptase (RT), produces DNA from RNA. These enzymes are essential for replicating the viral genome and transcribing viral genes into messenger RNA (mRNA) for translation of viral proteins.
Papovaviricetes is a class of viruses. The class shares the name of an abolished family, Papovaviridae, which was split in 1999 into the two families Papillomaviridae and Polyomaviridae. The class was established in 2019 and takes its name from the former family.
Pimascovirales is an order of viruses. The term is a portmanteau of a portmanteau of pitho-, irido-, marseille-, and ascoviruses.
Revtraviricetes is a class of viruses that contains all viruses that encode a reverse transcriptase. The group includes all ssRNA-RT viruses and dsDNA-RT viruses. It is the sole class in the phylum Artverviricota, which is the sole phylum in the kingdom Pararnavirae. The name of the group is a portmanteau of "reverse transcriptase" and -viricetes which is the suffix for a virus class.
Kitrinoviricota is a phylum of RNA viruses that includes all positive-strand RNA viruses that infect eukaryotes and are not members of the phylum Pisuviricota or Lenarviricota. The name of the group derives from Greek κίτρινος (kítrinos), which means yellow, and -viricota, which is the suffix for a virus phylum.
Alsuviricetes is a class of positive-strand RNA viruses which infect eukaryotes. The name of the group is a syllabic abbreviation of "alpha supergroup" with the suffix -viricetes indicating a virus class.
Pisuviricota is a phylum of RNA viruses that includes all positive-strand and double-stranded RNA viruses that infect eukaryotes and are not members of the phylum Kitrinoviricota,Lenarviricota or Duplornaviricota. The name of the group is a syllabic abbreviation of “picornavirus supergroup” with the suffix -viricota, indicating a virus phylum. Phylogenetic analyses suggest that Birnaviridae and Permutotetraviridae, both currently unassigned to a phylum in Orthornavirae, also belong to this phylum and that both are sister groups. Another proposed family of the phylum is unassigned Polymycoviridae in Riboviria.
Pisoniviricetes is a class of positive-strand RNA viruses which infect eukaryotes. A characteristic of the group is a conserved 3C-like protease from the PA clan of proteases for processing the translated polyprotein. The name of the group is a portmanteau of member orders "picornavirales, sobelivirales, nidovirales" and -viricetes which is the suffix for a virus class.
Thaspiviridae is a family of spindle-shaped viruses that is not assigned to any higher taxonomic ranks. The family contains a single genus, Nitmarvirus, which contains a single species, Nitmarvirus NSV1.
The Walleye dermal sarcoma virus (WDSV) is a retrovirus that infects walleye often causing oncogenesis. WDSV is an exogenous retrovirus belonging to the subfamily Orthoretrovirinae. This virus is related to the walleye epidermal hyperplasia viruses type 1 and type 2, all belonging to the epsilonretrovirus genus based on similarities of the gene coding for the reverse transcriptase conserved in retroviruses.
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