Sarcomonadea

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Sarcomonadea
Cercomonas sp.jpg
Cercomonas
Scientific classification OOjs UI icon edit-ltr.svg
Domain: Eukaryota
Clade: Diaphoretickes
Clade: SAR
Phylum: Cercozoa
Subphylum: Monadofilosa
Superclass: Ventrifilosa
Class: Sarcomonadea
Cavalier-Smith, 1993 stat. nov. 1995 emend. 2018
Subclasses and orders

The sarcomonads (from Ancient Greek σαρκώδης (sarkṓdēs) 'fleshy, i.e. amoeboid',and μονάς (monás) 'unit') or class Sarcomonadea are a group of amoeboid biciliate protists in the phylum Cercozoa. [1] They are characterized by a propensity to move through gliding on their posterior cilium or through filopodia, [2] a lack of scales or external theca, a soft cell surface without obvious cortical filamentous or membranous skeleton, two cilia without scales or hairs, tubular mitochondrial cristae, near-spherical extrusomes, and a microbody (probably a peroxisome) attached to the nucleus. [3]

Contents

History

In 1993 Cavalier-Smith described the sarcomonads as a subclass known as “Sarcomonadia”, an assemblage of unrelated cercozoans (thaumatomonads, proteomyxids, cercomonads...) and excavates (jakobids), in the now defunct class “Heteromitea”, in the old phylum “Opalozoa”. This subclass was created to lump together protozoa that have an anisokont type of zoospore (i.e. two cilia of different lengths), are non-thecate and have isodiametric extrusomes. [2] Sarcomonadia was composed of three superorders:

  1. “Jakobidea” (orders Jakobida and Cercomonadida), made up of sarcomonads with a single Golgi dictyosome;
  2. “Thaumatomonadidea” (order Thaumatomonadida), with scales made in vesicles associated with the mitochondria;
  3. Proteomyxidea (orders Pseudosporida and Leucodictyida), made up of sarcomonads with an unusual intranuclear rod of microfilaments unseen in other protists. [2]

Phylogenetic analyses published in 1997 showed close relationships between filose and reticulose amoebae and zooflagellates such as the sarcomonads, and they were grouped under the provisional phylum Rhizopoda. [4] In here, the sarcomonads were grouped as the class Sarcomonadea inside the subphylum Monadofilosa, and Sarcomonadea was emended to exclude the proteomyxids and jakobids. [5]

Later, in Cavalier-Smith's A revised six-kingdom system of life of 1998, the phylum Cercozoa was created to formally establish this group of protists previously known as Rhizopoda. This discovery put an end to the taxonomical dichotomy between amoebae and flagellates, since they are phylogenetically intermingled in Cercozoa. [6]

In 2003 the term Sarcomonadea was emended again to contain only two orders:

  1. Metopiida, comprising the single species Metopion fluens , but was later moved into a different class;
  2. Cercomonadida, the first current sarcomonad order, comprising the families Cercomonadidae and Heteromitidae. [3]

In 2009 the problematic Heteromitidae were broken apart and rearranged into the second current sarcomonad order Glissomonadida. [7]

In 2012 the paracercomonads joined Sarcomonadea, initially as cercomonads [8] and later as the third current sarcomonad order Paracercomonadida. [1] At the same time, the superclass Ventrifilosa was created to comprise Sarcomonadea, Imbricatea and Thecofilosea. [8] That same year, the protist Katabia was added to Sarcomonadea but remained incertae sedis within the group. [9]

Classification

The class Sarcomonadea is most closely related to Imbricatea and Thecofilosea. Together, they form the superclass Ventrifilosa in the phylum Cercozoa. The current classification divides the class into three orders: paracercomonads (subclass Paracercomonada), cercomonads and glissomonads (subclass Pediglissa). [1]

Class SarcomonadeaCavalier-Smith, 1993 stat. nov. 1995 emend. 2018
 Subclass Paracercomonada Cavalier-Smith, 2018
  Order Paracercomonadida Cavalier-Smith, 2018
   Family Paracercomonadidae Cavalier-Smith, 2012
 Subclass Pediglissa Cavalier-Smith, 2018
  Order Cercomonadida Poche, 1913 emend. Cavalier-Smith
   Family Cavernomonadidae Cavalier-Smith, 2012
   Family Cercomonadidae Saville Kent 1880-1881, emend. Cavalier-Smith
  Order Glissomonadida Howe et al., 2009
   Suborder Allapsina Cavalier-Smith, 2018
    Family Allapsidae Howe et al., 2009
   Suborder Sandonina Cavalier-Smith, 2018
    Family Bodomorphidae Hollande, 1952
    Family Sandonidae Howe et al., 2009
    Family Proleptomonadidae Howe et al. 2009
   Suborder Pansomonadina Vickerman, 2005 stat. nov. Cavalier-Smith, 2018
    Family Viridiraptoridae Hess & Melkonian, 2013
    Family Agitatidae Cavalier-Smith & Bass, 2009
    Family Acinetactidae Stokes, 1886
    Family Aurigamonadidae Cavalier-Smith, 2011
 Sarcomonadea incertae sedis
  Family Katabiidae Cavalier-Smith, 2012

Related Research Articles

<span class="mw-page-title-main">Cercozoa</span> Group of single-celled organisms

Cercozoa is a phylum of diverse single-celled eukaryotes. They lack shared morphological characteristics at the microscopic level, and are instead united by molecular phylogenies of rRNA and actin or polyubiquitin. They were the first major eukaryotic group to be recognized mainly through molecular phylogenies. They are the natural predators of many species of bacteria. They are closely related to the phylum Retaria, comprising amoeboids that usually have complex shells, and together form a supergroup called Rhizaria.

<span class="mw-page-title-main">Phaeodarea</span> Class of protists

Phaeodarea or Phaeodaria is a group of amoeboid cercozoan organisms. They are traditionally considered radiolarians, but in molecular trees do not appear to be close relatives of the other groups, and are instead placed among the Cercozoa. They are distinguished by the structure of their central capsule and by the presence of a phaeodium, an aggregate of waste particles within the cell.

<span class="mw-page-title-main">Cercomonad</span> Order of single-celled organisms

Cercomonads are small amoeboflagellates, widespread in aqueous habitats and common in soils.

<span class="mw-page-title-main">Tectofilosid</span> Group of protists

The tectofilosids are a group of filose amoebae with shells. These are composed of organic materials and sometimes collected debris, in contrast to the euglyphids, which produce shells from siliceous scales. The shell usually has a single opening, but in Amphitrema and a few other genera it has two on opposite ends. The cell itself occupies most of the shell. They are most often found on marsh plants such as Sphagnum.

<span class="mw-page-title-main">Monadofilosa</span> Group of protists

Monadofilosa is a grouping of Cercozoa. These organisms are single-celled amoeboid protists.

<span class="mw-page-title-main">Imbricatea</span> Class of single-celled organisms

Imbricatea is a class of Rhizaria characterised by silica scales. It is sometimes described as "Imbricatea/Silicofilosea", due to the similarity of those two groupings. Imbricatea is divided into the orders Euglyphida and Thaumatomonadida.

<span class="mw-page-title-main">Thecofilosea</span> Class of single-celled organisms

Thecofilosea is a class of unicellular testate amoebae belonging to the phylum Cercozoa. They are amoeboflagellates, organisms with flagella and pseudopodia, distinguished from other cercozoa by their scale-lacking test composed of organic material. They are closely related to the Imbricatea, a group of testate amoebae with tests composed of inorganic silica scales.

<span class="mw-page-title-main">Opalozoa</span> Subphylum of protists

Opalozoa is a subphylum of heterotrophic protists of the phylum Bigyra, and is the sister group to Sagenista. Opalozoans are non-photosynthetic heterokonts that are ancestrally phagotrophic but many times have evolved to be osmotrophic saprotrophs in the gut of vertebrate animals.

Proleptomonas is a genus of coprophilic protists, containing the single species Proleptomonas faecicola. It belongs to the phylum Cercozoa, although it was previously considered the only free-living kinetoplastid. It is the only member of family Proleptomonadidae.

<i>Katabia</i> Genus of heterotrophic protists

Katabia is a genus of soil-dwelling heterotrophic flagellate cercozoans containing the single species Katabia gromovi, and the only member of family Katabiidae.

Leucodictyids are heterotrophic amoeboid protists that comprise the order Leucodictyida in the phylum Cercozoa.

The paracercomonads are a group of cercozoan protists. Taxonomically, they comprise the family Paracercomonadidae, order Paracercomonadida and subclass Paracercomonada. Due to their morphological similarities to the cercomonads, members of this family were grouped with Cercomonas and similar taxa from the beginning. However, their similarities are due to convergent evolution.

<span class="mw-page-title-main">Ventrifilosa</span> Superclass of protists

Ventrifilosa is a highly diverse group of phagotrophic protists that glide through their flagella and emit filose pseudopods from their ventral side for feeding. Because of their mixture of amoeba and flagellate characteristics, they are amoeboflagellates. Members of this group are the Imbricatea, Sarcomonadea and Thecofilosea.

Cryptofilida is an order of small heterotrophic protists in the phylum Cercozoa. They are filose amoebae that lack cilia and gliding, and are instead characterized by movement through branching or unbranched granular filopodia that are appressed to the substrate during their feeding.

Massisteriidae is a family of granofilosean protists within the phylum Cercozoa.

<span class="mw-page-title-main">Glissomonadida</span> Order of protists

The glissomonads are a group of bacterivorous gliding flagellated protists that compose the order Glissomonadida, in the amoeboflagellate phylum Cercozoa. They comprise a vast, largely undescribed diversity of soil and freshwater organisms. They are the sister group to cercomonads; the two orders form a solid clade of gliding soil-dwelling flagellates called Pediglissa.

Pediglissa is a subclass of phagotrophic protists that inhabit soil or freshwater habitats. They were defined in 2018 according to phylogenetic analyses that showed a clade containing the orders Cercomonadida and Glissomonadida. They're the sister group of Paracercomonadida.

<span class="mw-page-title-main">Viridiraptoridae</span> Family of predatorial protists

Viridiraptoridae, previously known as clade X, is a clade of heterotrophic protists in the phylum Cercozoa. They're a family of glissomonads, a group containing a vast, mostly undescribed diversity of soil and freshwater organisms.

Saccharomycomorpha is a genus of non-flagellated protists with a rare yeast-like appearance, containing the single species Saccharomycomorpha psychra. It is the only genus of the family Saccharomycomorphidae, within the cercozoan order Glissomonadida. Before its description in 2021 it was known as clade T, recovered from environmental DNA in previous phylogenetic analyses.

<span class="mw-page-title-main">Amoeboflagellate</span> Cellular body type

An amoeboflagellate is any eukaryotic organism capable of behaving as an amoeba and as a flagellate at some point during their life cycle. Amoeboflagellates present both pseudopodia and at least one flagellum, often simultaneously.

References

  1. 1 2 3 Cavalier-Smith, Thomas; Chao, Ema E.; Lewis, Rhodri (April 2018). "Multigene phylogeny and cell evolution of chromist infrakingdom Rhizaria: contrasting cell organisation of sister phyla Cercozoa and Retaria". Protoplasma. 255 (5): 1517–1574. doi:10.1007/s00709-018-1241-1. PMC   6133090 . PMID   29666938.
  2. 1 2 3 Cavalier-Smith T (September 1993). "The Protozoan Phylum Opalozoa". Eukaryotic Microbiology. 40 (5): 609–615. doi:10.1111/j.1550-7408.1993.tb06117.x. S2CID   84129692.
  3. 1 2 Cavalier-Smith T, Chao EE (2003). "Phylogeny and Classification of Phylum Cercozoa (Protozoa)". Protist. 154 (3–4): 341–358. doi:10.1078/143446103322454112. ISSN   1434-4610. PMID   14658494.
  4. Cavalier-Smith T, Chao EE (1997). "Sarcomonad ribosomal RNA sequences, rhizopod phylogeny, and the origin of euglyphid amoebae". Archiv für Protistenkunde. 147 (3–4): 227–236. doi:10.1016/S0003-9365(97)80050-4. ISSN   0003-9365.
  5. Cavalier-Smith T (1997). "Amoeboflagellates and mitochondrial cristae in eukaryote evolution: megasystematics of the new protozoan subkingdoms eozoa and neozoa". Archiv für Protistenkunde. 147 (3–4): 237–258. doi:10.1016/S0003-9365(97)80051-6. ISSN   0003-9365.
  6. Cavalier-Smith T (August 1998). "A revised six-kingdom system of life". Biol Rev Camb Philos Soc. 73 (3): 203–266. doi:10.1017/s0006323198005167. PMID   9809012.
  7. Howe AT, Bass D, Vickerman K, Chao EE, Cavalier-Smith T (2009). "Phylogeny, Taxonomy, and Astounding Genetic Diversity of Glissomonadida ord. nov., The Dominant Gliding Zooflagellates in Soil (Protozoa: Cercozoa)". Protist. 160 (2): 159–189. doi:10.1016/j.protis.2008.11.007. ISSN   1434-4610. PMID   19324594.
  8. 1 2 Cavalier-Smith T, Karpov SA (2012). "Paracercomonas Kinetid Ultrastructure, Origins of the Body Plan of Cercomonadida, and Cytoskeleton Evolution in Cercozoa". Protist. 163 (1): 47–75. doi:10.1016/j.protis.2011.06.004. ISSN   1434-4610. PMID   21839678.
  9. Cavalier-Smith, Thomas; Oates, Brian (2012). "Ultrastructure of Allapsa vibrans and the Body Plan of Glissomonadida (Cercozoa)". Protist. 163 (2): 165–187. doi:10.1016/j.protis.2011.10.006. ISSN   1434-4610. PMID   22209009.