CDH15

CDH15
Identifiers
Aliases	CDH15 , CDH14, CDH3, CDHM, MCAD, MRD3, cadherin 15
External IDs	OMIM: 114019; MGI: 106672; HomoloGene: 3622; GeneCards: CDH15; OMA:CDH15 - orthologs
Gene location (Human) Chr. Chromosome 16 (human) [1] Band 16q24.3 Start 89,171,748 bp [1] End 89,195,492 bp [1]
Gene location (Mouse) Chr. Chromosome 8 (mouse) [2] Band 8 E1|8 71.99 cM Start 123,574,705 bp [2] End 123,594,136 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in cerebellar hemisphere right hemisphere of cerebellum gastrocnemius muscle muscle of thigh Skeletal muscle tissue of rectus abdominis glutes tibialis anterior muscle deltoid muscle paraflocculus of cerebellum tibia Top expressed in myotome muscle of thigh lumbar spinal ganglion temporal muscle triceps brachii muscle vastus lateralis muscle body of femur ankle internal carotid artery sternocleidomastoid muscle More reference expression data BioGPS More reference expression data
Gene ontology Molecular function calcium ion binding protein binding metal ion binding cytoskeletal protein binding protein homodimerization activity cadherin binding Cellular component caveola integral component of membrane neuromuscular junction plasma membrane extracellular exosome membrane Golgi apparatus cytosol cell surface catenin complex Biological process cell adhesion adherens junction organization positive regulation of muscle cell differentiation homophilic cell adhesion via plasma membrane adhesion molecules cell morphogenesis cell-cell junction assembly calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules cell-cell adhesion mediated by cadherin cell-cell adhesion Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 1013 12555 Ensembl ENSG00000129910 ENSMUSG00000031962 UniProt P55291 P33146 RefSeq (mRNA) NM_004933 NM_007662 RefSeq (protein) NP_004924 NP_031688 Location (UCSC) Chr 16: 89.17 – 89.2 Mb Chr 8: 123.57 – 123.59 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Cadherin-15 is a protein that in humans is encoded by the CDH15 gene. ^{[5] [6]}

Function

This gene is a member of the cadherin superfamily of genes, encoding calcium-dependent intercellular adhesion glycoproteins. Cadherins consist of an extracellular domain containing 5 cadherin domains, a transmembrane region, and a conserved cytoplasmic domain. Transcripts from this particular cadherin are expressed in myoblasts and upregulated in myotubule-forming cells. The protein is thought to be essential for the control of morphogenetic processes, specifically myogenesis, and may provide a trigger for terminal muscle cell differentiation. ^[6]

Interactions

CDH15 has been shown to interact with ARVCF. ^[7]

References

1. GRCh38: Ensembl release 89: ENSG00000129910 – Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000031962 – Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. Kaupmann K, Becker-Follmann J, Scherer G, Jockusch H, Starzinski-Powitz A (December 1992). "The gene for the cell adhesion molecule M-cadherin maps to mouse chromosome 8 and human chromosome 16q24.1-qter and is near the E-cadherin (uvomorulin) locus in both species". Genomics. 14 (2): 488–90. doi:10.1016/S0888-7543(05)80247-2. PMID   1427864.
6. "Entrez Gene: CDH15 cadherin 15, M-cadherin (myotubule)".
7. Kaufmann U, Zuppinger C, Waibler Z, Rudiger M, Urbich C, Martin B, Jockusch BM, Eppenberger H, Starzinski-Powitz A (November 2000). "The armadillo repeat region targets ARVCF to cadherin-based cellular junctions". J. Cell Sci. 113 (22): 4121–35. doi:10.1242/jcs.113.22.4121. PMID   11058098.

Further reading

• Donalies M, Cramer M, Ringwald M, Starzinski-Powitz A (1991). "Expression of M-cadherin, a member of the cadherin multigene family, correlates with differentiation of skeletal muscle cells". Proc. Natl. Acad. Sci. U.S.A. 88 (18): 8024–8. Bibcode:1991PNAS...88.8024D. doi: 10.1073/pnas.88.18.8024 . PMC   52438 . PMID   1840697.
• Bornemann A, Schmalbruch H (1994). "Immunocytochemistry of M-cadherin in mature and regenerating rat muscle". Anat. Rec. 239 (2): 119–25. doi:10.1002/ar.1092390202. PMID   8059975. S2CID   43526913.
• Shibata T, Shimoyama Y, Gotoh M, Hirohashi S (1997). "Identification of human cadherin-14, a novel neurally specific type II cadherin, by protein interaction cloning". J. Biol. Chem. 272 (8): 5236–40. doi: 10.1074/jbc.272.8.5236 . PMID   9030594.
• Kuch C, Winnekendonk D, Butz S, Unvericht U, Kemler R, Starzinski-Powitz A (1997). "M-cadherin-mediated cell adhesion and complex formation with the catenins in myogenic mouse cells". Exp. Cell Res. 232 (2): 331–8. doi:10.1006/excr.1997.3519. PMID   9168809.
• Shimoyama Y, Shibata T, Kitajima M, Hirohashi S (1998). "Molecular cloning and characterization of a novel human classic cadherin homologous with mouse muscle cadherin". J. Biol. Chem. 273 (16): 10011–8. doi: 10.1074/jbc.273.16.10011 . PMID   9545347.
• Kremmidiotis G, Baker E, Crawford J, Eyre HJ, Nahmias J, Callen DF (1998). "Localization of human cadherin genes to chromosome regions exhibiting cancer-related loss of heterozygosity". Genomics. 49 (3): 467–71. doi:10.1006/geno.1998.5281. PMID   9615235.
• Shimoyama Y, Tsujimoto G, Kitajima M, Natori M (2001). "Identification of three human type-II classic cadherins and frequent heterophilic interactions between different subclasses of type-II classic cadherins". Biochem. J. 349 (Pt 1): 159–67. doi:10.1042/0264-6021:3490159. PMC   1221133 . PMID   10861224.
• Kaufmann U, Zuppinger C, Waibler Z, Rudiger M, Urbich C, Martin B, Jockusch BM, Eppenberger H, Starzinski-Powitz A (2001). "The armadillo repeat region targets ARVCF to cadherin-based cellular junctions". J. Cell Sci. 113 (22): 4121–35. doi:10.1242/jcs.113.22.4121. PMID   11058098.
• Meigs TE, Fields TA, McKee DD, Casey PJ (2001). "Interaction of Galpha 12 and Galpha 13 with the cytoplasmic domain of cadherin provides a mechanism for beta -catenin release". Proc. Natl. Acad. Sci. U.S.A. 98 (2): 519–24. doi: 10.1073/pnas.021350998 . PMC   14619 . PMID   11136230.
• Hollnagel A, Grund C, Franke WW, Arnold HH (2002). "The cell adhesion molecule M-cadherin is not essential for muscle development and regeneration". Mol. Cell. Biol. 22 (13): 4760–70. doi:10.1128/MCB.22.13.4760-4770.2002. PMC   133893 . PMID   12052883.
• Kang JS, Feinleib JL, Knox S, Ketteringham MA, Krauss RS (2003). "Promyogenic members of the Ig and cadherin families associate to positively regulate differentiation". Proc. Natl. Acad. Sci. U.S.A. 100 (7): 3989–94. Bibcode:2003PNAS..100.3989K. doi: 10.1073/pnas.0736565100 . PMC   153035 . PMID   12634428.

External links

• CDH15 human gene location in the UCSC Genome Browser .
• CDH15 human gene details in the UCSC Genome Browser .
• Human CDH3 genome location and CDH3 gene details page in the UCSC Genome Browser .