Mir-367 microRNA precursor family

Last updated
mir-367
Identifiers
Symbolmir-367
Rfam RF00735
miRBase family MIPF0000162
Other data
RNA type microRNA
Domain(s) Eukaryota;
PDB structures PDBe

In molecular biology mir-367 microRNA is a short RNA molecule. MicroRNAs function to regulate the expression levels of other genes by several mechanisms.

Contents

miR302/367 cluster, together with Hdac2 inhibition, reprograms human and mouse fibroblasts to iPS cells, faster and more efficient than the custom viral infection (OSKM) strategy. Expression of miR367 is essential for Oct4 expression and miR302/367-mediated reprogramming. [1]

See also

Further reading

  1. Anokye-Danso F, Trivedi CM, Juhr D, Gupta M, Cui Z, Tian Y, Zhang Y, Yang W, Gruber PJ, Epstein JA, Morrisey EE (Apr 2011). "Highly efficient miRNA-mediated reprogramming of mouse and human somatic cells to pluripotency". Cell Stem Cell. 8 (4): 376–88. doi:10.1016/j.stem.2011.03.001. PMC   3090650 . PMID   21474102.
  2. Olivieri F, Lazzarini R, Recchioni R, Marcheselli F, Rippo MR, Di Nuzzo S, Albertini MC, Graciotti L, Babini L, Mariotti S, Spada G, Abbatecola AM, Antonicelli R, Franceschi C, Procopio AD (Aug 2013). "MiR-146a as marker of senescence-associated pro-inflammatory status in cells involved in vascular remodelling". Age. 35 (4): 1157–72. doi:10.1007/s11357-012-9440-8. PMC   3705128 . PMID   22692818.
  3. Kuo CH, Deng JH, Deng Q, Ying SY (Jan 2012). "A novel role of miR-302/367 in reprogramming". Biochemical and Biophysical Research Communications. 417 (1): 11–6. doi:10.1016/j.bbrc.2011.11.058. PMID   22138244.
  4. Costa FF, Bischof JM, Vanin EF, Lulla RR, Wang M, Sredni ST, Rajaram V, Bonaldo Mde F, Wang D, Goldman S, Tomita T, Soares MB (2011). Knight M (ed.). "Identification of microRNAs as potential prognostic markers in ependymoma". PLOS ONE. 6 (10): e25114. Bibcode:2011PLoSO...625114C. doi: 10.1371/journal.pone.0025114 . PMC   3203863 . PMID   22053178.
  5. Zhang L, Liu Y, Song F, Zheng H, Hu L, Lu H, Liu P, Hao X, Zhang W, Chen K (Aug 2011). "Functional SNP in the microRNA-367 binding site in the 3'UTR of the calcium channel ryanodine receptor gene 3 (RYR3) affects breast cancer risk and calcification". Proceedings of the National Academy of Sciences of the United States of America. 108 (33): 13653–8. doi: 10.1073/pnas.1103360108 . PMC   3158174 . PMID   21810988.
  6. Tsai ZY, Chou CH, Lu CY, Singh S, Yu SL, Li SS (Aug 2011). "Proteomic comparison of human embryonic stem cells with their differentiated fibroblasts: Identification of 206 genes targeted by hES cell-specific microRNAs". The Kaohsiung Journal of Medical Sciences. 27 (8): 299–306. doi: 10.1016/j.kjms.2011.03.010 . PMID   21802640.
  7. Xie T, Liang J, Guo R, Liu N, Noble PW, Jiang D (May 2011). "Comprehensive microRNA analysis in bleomycin-induced pulmonary fibrosis identifies multiple sites of molecular regulation". Physiological Genomics. 43 (9): 479–87. doi:10.1152/physiolgenomics.00222.2010. PMC   3110895 . PMID   21266501.
  8. Tsai ZY, Singh S, Yu SL, Kao LP, Chen BZ, Ho BC, Yang PC, Li SS (Jan 2010). "Identification of microRNAs regulated by activin A in human embryonic stem cells". Journal of Cellular Biochemistry. 109 (1): 93–102. doi:10.1002/jcb.22385. PMID   19885849. S2CID   11557944.
  9. Li SS, Yu SL, Kao LP, Tsai ZY, Singh S, Chen BZ, Ho BC, Liu YH, Yang PC (Apr 2009). "Target identification of microRNAs expressed highly in human embryonic stem cells". Journal of Cellular Biochemistry. 106 (6): 1020–30. doi: 10.1002/jcb.22084 . PMID   19229866.
  10. Palmieri A, Pezzetti F, Brunelli G, Martinelli M, Scapoli L, Arlotti M, Masiero E, Carinci F (2008). "Medpor regulates osteoblast's microRNAs". Bio-Medical Materials and Engineering. 18 (2): 91–7. doi:10.3233/BME-2008-0512. PMID   18408260.
  11. Yue J, Sheng Y, Orwig KE (2008). "Identification of novel homologous microRNA genes in the rhesus macaque genome". BMC Genomics. 9: 8. doi:10.1186/1471-2164-9-8. PMC   2254598 . PMID   18186931.
  12. Hayes B, Fagerlie SR, Ramakrishnan A, Baran S, Harkey M, Graf L, Bar M, Bendoraite A, Tewari M, Torok-Storb B (Feb 2008). "Derivation, characterization, and in vitro differentiation of canine embryonic stem cells". Stem Cells. 26 (2): 465–73. doi: 10.1634/stemcells.2007-0640 . PMID   18065395.

Related Research Articles

The Let-7 microRNA precursor was identified from a study of developmental timing in C. elegans, and was later shown to be part of a much larger class of non-coding RNAs termed microRNAs. miR-98 microRNA precursor from human is a let-7 family member. Let-7 miRNAs have now been predicted or experimentally confirmed in a wide range of species (MIPF0000002). miRNAs are initially transcribed in long transcripts called primary miRNAs (pri-miRNAs), which are processed in the nucleus by Drosha and Pasha to hairpin structures of about 70 nucleotide. These precursors (pre-miRNAs) are exported to the cytoplasm by exportin5, where they are subsequently processed by the enzyme Dicer to a ~22 nucleotide mature miRNA. The involvement of Dicer in miRNA processing demonstrates a relationship with the phenomenon of RNA interference.

mir-9/mir-79 microRNA precursor family

The miR-9 microRNA, is a short non-coding RNA gene involved in gene regulation. The mature ~21nt miRNAs are processed from hairpin precursor sequences by the Dicer enzyme. The dominant mature miRNA sequence is processed from the 5' arm of the mir-9 precursor, and from the 3' arm of the mir-79 precursor. The mature products are thought to have regulatory roles through complementarity to mRNA. In vertebrates, miR-9 is highly expressed in the brain, and is suggested to regulate neuronal differentiation. A number of specific targets of miR-9 have been proposed, including the transcription factor REST and its partner CoREST.

mir-181 microRNA precursor

In molecular biology miR-181 microRNA precursor is a small non-coding RNA molecule. MicroRNAs (miRNAs) are transcribed as ~70 nucleotide precursors and subsequently processed by the RNase-III type enzyme Dicer to give a ~22 nucleotide mature product. In this case the mature sequence comes from the 5' arm of the precursor. They target and modulate protein expression by inhibiting translation and / or inducing degradation of target messenger RNAs. This new class of genes has recently been shown to play a central role in malignant transformation. miRNA are downregulated in many tumors and thus appear to function as tumor suppressor genes. The mature products miR-181a, miR-181b, miR-181c or miR-181d are thought to have regulatory roles at posttranscriptional level, through complementarity to target mRNAs. miR-181 which has been predicted or experimentally confirmed in a wide number of vertebrate species as rat, zebrafish, and in the pufferfish.

mir-19 microRNA precursor family

There are 89 known sequences today in the microRNA 19 (miR-19) family but it will change quickly. They are found in a large number of vertebrate species. The miR-19 microRNA precursor is a small non-coding RNA molecule that regulates gene expression. Within the human and mouse genome there are three copies of this microRNA that are processed from multiple predicted precursor hairpins:

mir-7 microRNA precursor

This family represents the microRNA (miRNA) precursor mir-7. This miRNA has been predicted or experimentally confirmed in a wide range of species. miRNAs are transcribed as ~70 nucleotide precursors and subsequently processed by the Dicer enzyme to give a ~22 nucleotide product. In this case the mature sequence comes from the 5' arm of the precursor. The extents of the hairpin precursors are not generally known and are estimated based on hairpin prediction. The involvement of Dicer in miRNA processing suggests a relationship with the phenomenon of RNA interference.

<span class="mw-page-title-main">Induced pluripotent stem cell</span> Pluripotent stem cell generated directly from a somatic cell

Induced pluripotent stem cells are a type of pluripotent stem cell that can be generated directly from a somatic cell. The iPSC technology was pioneered by Shinya Yamanaka's lab in Kyoto, Japan, who showed in 2006 that the introduction of four specific genes, collectively known as Yamanaka factors, encoding transcription factors could convert somatic cells into pluripotent stem cells. He was awarded the 2012 Nobel Prize along with Sir John Gurdon "for the discovery that mature cells can be reprogrammed to become pluripotent."

<span class="mw-page-title-main">LIN28</span>

Lin-28 homolog A is a protein that in humans is encoded by the LIN28 gene.

miR-137

In molecular biology, miR-137 is a short non-coding RNA molecule that functions to regulate the expression levels of other genes by various mechanisms. miR-137 is located on human chromosome 1p22 and has been implicated to act as a tumor suppressor in several cancer types including colorectal cancer, squamous cell carcinoma and melanoma via cell cycle control.

mir-145 Non-coding RNA in the species Homo sapiens

In molecular biology, mir-145 microRNA is a short RNA molecule that in humans is encoded by the MIR145 gene. MicroRNAs function to regulate the expression levels of other genes by several mechanisms.

mir-184

In molecular biology, miR-184 microRNA is a short non-coding RNA molecule. MicroRNAs (miRNAs) function as posttranscriptional regulators of expression levels of other genes by several mechanisms. Several targets for miR-184 have been described, including that of mediators of neurological development, apoptosis and it has been suggested that miR-184 plays an essential role in development.

miR-138

miR-138 is a family of microRNA precursors found in animals, including humans. MicroRNAs are typically transcribed as ~70 nucleotide precursors and subsequently processed by the Dicer enzyme to give a ~22 nucleotide product. The excised region or, mature product, of the miR-138 precursor is the microRNA mir-138.

miR-134 Family of microRNA precursors

miR-134 is a family of microRNA precursors found in mammals, including humans. MicroRNAs are typically transcribed as ~70 nucleotide precursors and subsequently processed by the Dicer enzyme to give a ~22 nucleotide product. The excised region or, mature product, of the miR-134 precursor is the microRNA mir-134.

In molecular biology mir-301 microRNA is a short RNA molecule. MicroRNAs function to regulate the expression levels of other genes by several mechanisms.

In molecular biology mir-339 microRNA is a short RNA molecule. MicroRNAs function to regulate the expression levels of other genes by several mechanisms. miR-339-5p expression was associated with overall survival in breast cancer.

In molecular biology mir-345 microRNA is a short RNA molecule. MicroRNAs function to regulate the expression levels of other genes by several mechanisms.

In molecular biology mir-374 microRNA is a short RNA molecule. MicroRNAs function to regulate the expression levels of other genes by several mechanisms.

In molecular biology mir-186 microRNA is a short RNA molecule. MicroRNAs function to regulate the expression levels of other genes by several mechanisms.

In molecular biology mir-396 microRNA is a short RNA molecule. MicroRNAs function to regulate the expression levels of other genes by several mechanisms.

<span class="mw-page-title-main">MIR106A</span> Non-coding RNA in the species Homo sapiens

MicroRNA 106a is a microRNA that in humans is encoded by the MIR106A gene.