African admixture in Europe

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African admixture in Europe refers to the presence of human genotypes attributable to periods of human population dispersals out of Africa in the genetic history of Europe.

Contents

More recent African admixture primarily Berber admixture from North Africa  is associated with historic migrations through the Mediterranean Sea and the Muslim conquests of the Early Middle Ages. This admixture can be found primarily in the Iberian Peninsula (modern day Spain and Portugal), with higher levels in the West and the South [1] [2] [3] and Southern Italy, with higher levels in Sardinia and Sicily. [4]

Neolithic

The change from hunting and gathering to agriculture during the Neolithic Revolution was a watershed in world history. The societies that first made the change to agriculture are believed to have lived in Western Asia and Asia Minor around 10,000 BCE. Agriculture was introduced into Europe and North Africa by migrating farmers from West Asia, around Anatolia. [5] According to the demic diffusion model, these Middle Eastern farmers either replaced or interbred with the local European hunter-gather populations that had been living in Europe since the early Out of Africa migrations. [6]

It has been suggested that the first Middle Eastern farmers reflected North African influences or vice versa. [7] There have been suggestions that some genetic lineages found in the Middle East arrived there during this period. [8] The first agricultural societies in the Middle East are generally thought to have emerged after, and perhaps from, the Natufian culture between 12,000 and 10,000 BCE. The latter group was widely semi-sedentary even before the introduction of agriculture. An important migration from North Africa across the Sinai also appears to have occurred before the formation of the Natufian.[ citation needed ]

Historical period

In historical times, there has been a period of north African influence in southern Europe, especially in Iberia and parts of southern Italy (namely Sicily), during various Muslim conquests. The genetic effect of this period on modern European populations is the subject of discussion (see below). In more recent history, the peoples of Europe and Africa came into contact during the exploration and colonization of Africa and as a consequence of the Atlantic slave trade. [9]

Admixture Analysis of Modern Day Populations

5 component admixture plots for European, West Asian, North African and West African populations (Hernandez et al. 2019) Overview of the genetic structure and global ancestry inference in a selection of European, Near Eastern, and African populations.png
5 component admixture plots for European, West Asian, North African and West African populations (Hernández et al. 2019)
Distribution of North African Admixture in the Iberian Peninsula (Bycroft et al. 2019) NorthAfricanAdmixtureIberianPeninsula.jpg
Distribution of North African Admixture in the Iberian Peninsula (Bycroft et al. 2019)
Haplotype-based estimates of genetic sharing between Europe and Africa (Botigue et al. 2013) Map of African admixture in European populations.png
Haplotype-based estimates of genetic sharing between Europe and Africa (Botigué et al. 2013)


Admixture Analysis of Historic Populations

Sexual Chromosomes

Generally, markers and lineages used to characterize African admixture are those that are believed to be specific to Africa. There are also DNA polymorphisms that are shared between populations native to Europe, West Asia, North Africa and the Horn of Africa, such as the Y-chromosomal haplogroup E1b1b and the mitochondrial haplogroup M1. [9]

With regard to the paternal haplogroup E1b1b and maternal haplogroup M1, derivatives of these clades have been observed in prehistoric human fossils excavated at the Ifri n'Amr or Moussa site in Morocco, which have been radiocarbon-dated to the Early Neolithic period (ca. 5,000 BC). Ancient DNA analysis of these specimens indicates that they carried paternal haplotypes related to the E1b1b1b1a (E-M81) subclade and the maternal haplogroups U6a and M1, all of which are frequent among present-day communities in the Maghreb. These ancient individuals also bore an autochthonous Maghrebi genomic component that peaks among modern Berbers, indicating that they were ancestral to populations in the area. Additionally, fossils excavated at the Kelif el Boroud site near Rabat, were found to carry the broadly-distributed paternal haplogroup T-M184 as well as the maternal haplogroups K1, T2 and X2, the latter of which were common mtDNA lineages in Neolithic Europe and Anatolia. These ancient individuals likewise bore the Berber-associated Maghrebi genomic component, as well as Early European Farmer ancestry. This altogether indicates that the Late Neolithic Kelif el Boroud inhabitants were ancestral to contemporary populations in the area, but also experienced substantial gene flow from Europe. [19]

Other lineages that are now found in Africa and Europe may have a common origin in Asia (e.g. Y haplogroups R1, and some paternal haplogroup T and U subclades). One subclade of haplogroup U, namely U6a1, is known to have expanded from northern and eastern Africa back into Europe [20] [21] even though haplogroup U6 is considered to have originated in the Middle East. Other lineages are known to have moved from Europe directly into Africa, for example mitochondrial haplogroups H1 and H3. [22] Such bidirectional migrations between Africa and Eurasia complicate the task of defining admixture.

Y-DNA

One proposed example of Holocene gene flow from North Africa to Europe, via the Middle East, is thought to be E1b1b, which is considered to have emerged about 40,000 years ago in the Horn of Africa, and branches of it would have then migrated to the Middle East by 15,000 years ago during the late Pleistocene period. [23] [8] [24]

Entering the late mesolithic Natufian culture, the E1b1b1a2 (E-V13) subclade has been associated with the spread of farming from the Middle East into Europe either during or just before the Neolithic transition. E1b1b1 lineages are found throughout Europe but are distributed along a south-to-north cline, with an E1b1b1a mode in the Balkans. [25] [26] [27] [lower-alpha 1] [lower-alpha 2]

In separate migrations, E lineages in the form of the E1b1b1b subclade appear to have entered Europe from Northwest Africa into Iberia. In a sample of European males, haplogroup E was observed at a frequency of 7.2%. [25] The timing of this movement has been given widely varying estimates. [28] In much of Europe, frequencies of E lineages are very low, usually less than 1%. For example, the frequency of such lineages are at 2% in southern Portugal, 4% in northern Portugal, 2.9% in Istanbul, and 4.3% among Turkish Cypriots. [25] E1b1a is closely related to E1b1b, the most frequent clade in Northeast Africa, Northwest Africa and Europe. E lineages that are not E1b1a or E1b1b could therefore reflect either a recent expansion associated with E1b1a or ancient population movements associated with E1b1b. For example, haplogroup E1a lineages have been detected in Portugal (5/553 = 1%), [29] among Italians in Calabria (1/80=1.3%), and among Albanians in Calabria (2/68=2.9%). [26] The distribution of haplogroup E1a lineages in Portugal was independent of the distribution of the younger and more ubiquitous E1b1a. [29] This distribution is consistent with a prehistoric migration from Africa to Iberia, possibly alongside mtDNA haplogroup U6. In Majorcans, Sub-Saharan Y-DNA lineage E-V38 was found at a total of 3.2% (2/62). [30] Sub-Saharan Y-DNA lineages E3a, E1, BC*, (xE3), and E3* are found between 1 and 5% in Portugal, Valencia, Majorca, Cantabria, Málaga, Seville, and Galicia (Spain). [30] [31] In Sardinians, Sub-Saharan Y-DNA lineages A1b1b2b and E1a1 were found at a total of 1.0% (A1b1b2b 0.5% / E1a1 0.5%). [32]

Haplogroups A and B are thought to have been the predominant haplogroups in central and southern Africa prior to the Bantu Expansion. Currently these haplogroups are less common than E lineages. In a sample of 5,000 African men, haplogroup A had a frequency of 5%. Haplogroup A has rare occurrences in Europe, but recently the haplogroup was detected in seven indigenous British males with the same Yorkshire surname. [33]

E3b1 and its haplogroups E-M81 and E-M78 in North Africa, and E-M123 in the Near East E1b1bRoute.png
E3b1 and its haplogroups E-M81 and E-M78 in North Africa, and E-M123 in the Near East

The subclade E3b1 (probably originating in northeastern Africa) has a wide distribution in North Africa, the Horn of Africa, the Middle East, and Europe. This haplogroup, in Italy, is represented by E-M78, E-M123 and E-M81 (Figure 3) [34] and reaches a frequency of 8% in northern and central Italy and slightly higher, 11%, in the south of that country. [34]
It has also been argued that the European distribution of E3b1 is compatible with the Neolithic demic diffusion of agriculture; thus, two subclades—E3b1a-M78 and E3b1c-M123—present a higher occurrence in Anatolia, the Balkans, and the Italian peninsula. Another subclade, E3b1b-M81 is associated with Berber populations and is commonly found in regions that have had historical gene flow with northern Africa, such as the Iberian Peninsula, the Canary Islands, and Sicily. [34]

North African Y-DNA E-M81 was found at a total of 41.1% among "pasiegos" from Cantabria, Spain. That is the highest frequency observed in Europe to date. [25] Estimates of Y-Chromosome ancestry vary. Using 1140 samples from throughout the Iberian peninsula, giving a proportion of 10.6% North African ancestry to the paternal composite of Iberians. [30] [35] From an analysis of the Y-chromosome with 659 samples from Southern Portugal, 680 from Northern Spain, 37 samples from Andalusia, 915 samples from mainland Italy, and 93 samples from Sicily found significantly higher levels of North African male ancestry in Portugal, Spain and Sicily (7.1%, 7.7% and 7.5% respectively) than in peninsular Italy (1.7%). [36] Considering both some E-M78 subhaplogroups and the E-M81 haplogroup, the contribution of northern African lineages to the entire male gene pool of Iberia (barring Pasiegos), continental Italy, and Sicily can be estimated as 5.6%, 3.6%, and 6.6%, respectively. [37] Y-DNA lineages E-V12 and E-V22 have been associated with a Levantine source (represented by modern Lebanese), while North African haplogroup E-M81 shows an average frequency of 1.53% in the current Sicilian and Southern Italian genetic pool, but the typical Maghrebin core haplotype 13-14-30-24-9-11-13 has been found in only two out of the five E-M81 individuals. [38] These results, along with the negligible contribution from North-African populations revealed by the admixture-like plot analysis, suggest only a marginal impact of trans-Mediterranean gene flows on the current Sicilian and Southern Italian genetic pool. [38]

Auton et al. (2009) found that South West Europe had the highest proportion in Europe of haplotypes that are shared with sub-Saharan Africa (represented by Yoruba), and significantly more relative to South East Europe. [39]

mtDNA

Haplogroup L lineages are relatively infrequent (1% or less) throughout Europe with the exception of Iberia (Spain and Portugal), where frequencies as high as 22% have been reported, and some regions of Southern Italy, where frequencies as high as 2% and 3% have been found. About 65% of the European L lineages most likely arrived in rather recent historical times (Romanization period, Arab conquest of the Iberian Peninsula and Sicily, Atlantic slave trade) and about 35% of L mtDNAs form European-specific subclades, revealing that there was gene flow from Sub-Saharan Africa toward Europe as early as 11,000 years ago. [40]

Map (in the link) showing the distribution of Sub-Saharan mtDNA (shown in red) in Europe
Map is From Cerezo et al. 2012 [40]
Universidad de Santiago de Compostela
Iberia (Spain & Portugal) having the highest amount and strongest concentration of Sub-Saharan mtDNA in Europe.

In Iberia the mean frequency of haplogroup L lineages reaches 3.83%; the frequency is higher in Portugal (5.83%) than in Spain (2.9% average), and without parallel in the rest of Europe. In both countries, frequencies vary widely between regions, but with increased frequencies observed for Madeira (insular Portugal), southern Portugal, Córdoba (southern Spain), Huelva (southern Spain), Canary Islands (insular Spain), Extremadura (western Spain) and Leon (western Spain). [41] In the Autonomous regions of Portugal (i.e. Madeira and the Azores), L haplogroups constituted about 13% of the lineages in Madeira, significantly more than in the Azores. [42] In the Canary Islands, frequencies have been reported at 6.6%. [42] Regarding Iberia, current debates are concerned with whether these lineages are associated with prehistoric migrations, the Islamic occupation of Iberia, or the slave trade. African lineages in Iberia were predominantly the result of the Atlantic slave trade. [43] Most of the L lineages in Iberia matched Northwest African L lineages rather than contemporary Sub-Saharan L lineages. [44] This pattern indicates that most of the Sub-Saharan L lineages entered Iberia in prehistoric times rather than during the slave trade. According to Sub-Saharan lineages found in Iberia matched lineages from diverse regions in Africa. [41] This pattern is more compatible with a recent arrival of these lineages after slave trading began in the 15th century. [44] Alternative scenarios that invoke much older and demographically more significant introductions have been proposed [44] or a substantial role of the Roman and/or Islamic periods on the introduction of Sub-Saharan lineages seem unlikely. Extracted DNA from human remains that were exhumed from old burial sites in Al-Andalus, Spain, The remains date to between the 12th and 13th centuries. [45] The frequency of Sub-Saharan lineages detected in the medieval samples was 14.6% and 8.3% in the present population of Priego de Cordoba. The Muslim occupation and prehistoric migrations before the Muslim occupation would have been the source of these lineages. The highest frequencies of Sub-Saharan lineages found so far in Europe were observed in the comarca of Sayago (18.2%) which is "comparable to that described for the South of Portugal". [46]

In Italy, haplogroup L lineages are present at lower frequencies than in Iberia and are detected only in certain regions: Latium, Volterra, [47] Basilicata, and Sicily. [48]

In eastern Europe, haplogroup L lineages are present at very low frequencies. Though a high diversity of African mtDNA lineages have been detected, few lineages have accumulated enough mutations in Europe to form monophyletic clusters. [9] The monophyletic clusters L1b and L3b have an estimated age no greater than 6,500 years. African L1b, L2a, L3b, L3d and M1 clades in Slavic populations have been identified at low frequencies. [49] L1b, L3b and L3d had matches with West African populations, indicating that these lineages probably entered Europe through Iberia. One lineage, L2a1a, found in Czechs and Slovaks, appeared to be much older, indicating that it may have entered Europe in prehistoric times. [49] This clade is distinct from the branch of L2a1 called L2a1l2a that is found in individuals of Ashkenazi heritage from central and eastern Europe [50] and less frequently in non-Jewish Poles. [51] L2a lineages are widespread throughout Africa; as a result, the origins of this lineage are uncertain. [52]

Haplogroup M1 is also found in Europe at low frequencies. Haplogroup M1 had a frequency of 0.3%. [21] The origins of haplogroup M1 have yet to be conclusively established.

A prehistoric episode from the Early Holocene is likely to be a contributor to some of the U6 and L lingeages present in Mediterranean Europe. [53]

Frequencies of haplogroup L lineages

CountryRegionNumber testedStudy %
EuropeContinent-wide (excl. Tuscany)10,589Achilli et al. (2007) [47] 0.79%
South Iberia Spain & Portugal 310Casas et al. (2006) [45] 7.40%
SpainCountrywide312Álvarez et al. (2007) [54] 2.90%
SpainCentral Spain50Plaza et al. (2003) [55] 4.00%
SpainNorth-West Spain216Achilli et al. (2007) [47] 3.70%
Spain Basque Country 156Achilli et al. (2007) [47] 0.64%
Spain Galicia 92Pereira et al. (2005) [41] 3.30%
Spain Zamora 214Álvarez et al. (2010) [46] 4.70%
Spain Sayago 33Álvarez et al. (2010) [46] 18.18%
Spain Cordoba 108Casas et al. (2006) [45] 8.30%
Spain Huelva 135Hernandez et al. (2014)5.70%
Spain Catalonia 101Álvarez-Iglesias et al. (2009)2.97%
Spain Balearic Islands 231Picornell et al. (2005) [56] 2.20%
Spain Canary Islands 300Brehm et al. (2003) [42] 6.60%
PortugalCountrywide594Achilli et al. (2007) [47] 6.90%
PortugalCountrywide1429Barral-Arca et al. (2016) [57] 6.16%
PortugalCountrywide549Pereira et al. (2005) [41] 5.83%
PortugalNorth100Pereira et al. (2010) [58] 5.00%
PortugalCenter82Pereira et al. (2010) [58] 9.70%
PortugalCenter82Plaza et al. (2003) [55] 6.10%
PortugalSouth195Brehm et al. (2003) [42] 11.30%
PortugalSouth303Achilli et al. (2007) [47] 10.80%
Portugal Coruche 160Pereira et al. (2010) [58] 8.70%
Portugal Pias 75Pereira et al. (2010) [58] 3.90%
Portugal Alcácer do Sal 50Pereira et al. (2010) [58] 22.00%
Portugal Azores 179Brehm et al. (2003) [42] 3.40%
Portugal Madeira 155Brehm et al. (2003) [42] 12.90%
Portugal Madeira 153Fernandes et al. (2006) [59] 12.40%
ItalyCountrywide583Brisighelli et al. (2012) [34] 1.20%
ItalyCountrywide865Boattini et al. (2013) [60] 0.00%
ItalyCountrywide240Babalini et al. (2005) [61] 0.40%
Italy Tuscany 322Achilli et al. (2007) [47] 1.86%
Italy Tuscany 49Plaza et al. (2003) [55] 2.00%
Italy Volterra 114Achilli et al. (2007) [47] 2.63%
Italy Latium 138Achilli et al. (2007) [47] 2.90%
Italy Marche 813Achilli et al. (2007) [47] 0.98%
ItalyCentral Italy83Plaza et al. (2003) [55] 1.20%
Italy Lombardy 177Achilli et al. (2007) [47] 0.00%
Italy Piedmont 169Achilli et al. (2007) [47] 0.00%
Italy Sardinia 258Pardo et al. (2012) [62] 0.40%
Italy Sardinia 73Plaza et al. (2003) [55] 2.80%
Italy Sardinia 85Sanna et al. (2011) [63] 0.00%
Italy Sardinia (Ogliastra)475Fraumene C et al. (2003) [64] 0.00%
Italy Sardinia 96Morelli et al. (1999)0.00%
Italy Campania (South Italy)313Achilli et al. (2007) [47] 0.32%
Italy Basilicata (South Italy)92Ottoni et al. (2009) [48] 2.20%
Italy Apulia & Calabria (South Italy)226Achilli et al. (2007) [47] 0.00%
Italy Southern Italy 115Sarno et al. (2014) [38] 0.00%
Italy Southern Italy 37Plaza et al. (2003) [55] 8.10%[ failed verification ]
Italy Sicily 106Cali et al. (2003)0.94%
Italy Sicily 105Achilli et al. (2007) [47] 1.90%
Italy Sicily 169Plaza et al. (2003) [55] 0.60%
Italy Sicily 198Sarno et al. (2014) [38] 1.01%
Italy Sicily 465Romano et al. (2003) [65] 0.65%
Greece Crete 202Achilli et al. (2007) [47] 0.99%
Greece Crete 283Martinez et al. (2008) [66] 0.00%
Greece Macedonia 125Richards et al. (2000) [67] 0.00%
GreeceCountrywide155Achilli et al. (2007) [47] 0.00%
Cyprus Cyprus 91Irwin et al. (2008) [68] 3.30%[ failed verification ]
United Kingdom England 335Achilli et al. (2007) [47] 0.60%
United KingdomWales92Achilli et al. (2007) [47] 0.00%
FinlandCountrywide121Achilli et al. (2007) [47] 0.82%
GermanyCountrywide335Achilli et al. (2007) [47] 0.30%
IrelandCountrywide300Achilli et al. (2007) [47] 0.00%
FranceCountrywide332Achilli et al. (2007) [47] 0.30%
BulgariaCountrywide141Achilli et al. (2007) [47] 0.71%
Bosnia and HerzegovinaCountrywide144Achilli et al. (2007) [47] 0.69%

In an analysis which also contains an admixture data but no cluster membership coefficients, shows little to no Sub-Saharan African influence in a wide array of European samples, i.e. Albanians, Austrians, Belgians, Bosnians, Bulgarians, Croatians, Cypriots, Czechs, Danes, Finns, Frenchmen, Germans, Greeks, Hungarians, Irish, Italians, Kosovars, Lithuanians, Latvians, Macedonians, Netherlanders, Norwegians, Poles, Portuguese, Romanians, Russians, Scots, Serbians, Slovaks, Slovenians, Spaniards, Swedes, Swiss (German, French and Italian), Ukrainians, subjects of the United Kingdom, and Yugoslavians. [39]

Haplogroup U6, to which a North African origin has been attributed, is largely distributed among Mozabites (28.2%) and Mauritanians (20%). [69] In other northwest Africans, the frequency of U6 ranges from 4.2% in Tunisians to 8% in Moroccan Arabs. [55] In Europe, U6 is most common in Spain and Portugal. [70] [55]

Frequencies of haplogroup U6 lineages

CountryRegionNumber testedStudy %
ItalyCountrywide583Brisighelli et al. (2012) [34] 0.8%
ItalyMainland411Plaza et al. (2003) [55] 0.0%
ItalyCountrywide865Boattini et al. (2013) [60] 0.35%
Italy Sicily 169Plaza et al. (2003) [55] 0.6%
Italy Sicily 106Maca-Meyer et al. (2003). [70] 0.94%
ItalyLazio52Babalini et al. (2005) [61] 5.8%
ItalyAbruzzo (Molise)73Babalini et al. (2005) [61] 0%
ItalyCampania48Babalini et al. (2005) [61] 0%
Italy Volterra (Tuscany)114Achilli et al. (2007) [47] 0.00%
Italy Murlo (Tuscany)86Achilli et al. (2007) [47] 1.20%
Italy Casentino (Tuscany)122Achilli et al. (2007) [47] 0.80%
Italy Sicily 105Achilli et al. (2007) [47] 0.95%
Italy Latium 138Achilli et al. (2007) [47] 0.00%
Italy Lombardy 177Achilli et al. (2007) [47] 0.00%
Italy Piedmont 169Achilli et al. (2007) [47] 0.00%
Italy Marche 813Achilli et al. (2007) [47] 0.25%
Italy Campania 313Achilli et al. (2007) [47] 1.28%
Italy Apulia-Calabria 226Achilli et al. (2007) [47] 1.33%
Italy Sardinia 370Achilli et al. (2007) [47] 0.27%
SpainCentral Spain50Plaza et al. (2003) [55] 2.0%
Spain Galicia 103Plaza et al. (2003) [55] 1.9%
Spain Galicia 135Maca-Meyer et al. (2003) [70] 2.2%
Spain Catalonia 118Maca-Meyer et al. (2003) [70] 1.6%
Spain Huelva 135Hernandez et al. (2014) [71] 8.8%
SpainMaragatos49Maca-Meyer et al. (2003) [70] 8.1%
Spain Canary Islands 300Brehm et al. (2003) [42] 14.0%
PortugalCountrywide54Plaza et al. (2003) [55] 5.6%
PortugalNorth Portugal184Maca-Meyer et al. (2003) [70] 4.3%
PortugalCentral Portugal161Brehm et al. (2003) [42] 1.9%
Portugal Madeira 155Brehm et al. (2003) [42] 3.9%
Portugal Madeira 153Fernandes et al. (2006) [59] 3.3%
Iberia Spain & Portugal 887Plaza et al. (2003) [55] 1.8%

GM immunoglobulin allotypes

Further studies have shown that the presence of haplotype GM*1,17 23' 5* in southern Europe. This haplotype is considered a genetic marker of Sub-Saharan Africa, where it shows frequencies of about 80%. [72] Whereas, in non-Mediterranean European populations, that value is about 0.3%, in Spain the average figure for this African haplotype is nearly eight times greater (though still at a low level) at 2.4%, and it shows a peak at 4.5% in Galicia. [73] Values of around 4% have also been found in Huelva and in the Aran valley in the Pyrenees. [74] Although some researchers have associated African traces in Iberia to Islamic conquest, the presence of GM*1,17 23' 5* haplotype in Iberia may in fact be due to more ancient processes as well as more recent ones through the introduction of genes from slaves sold from Africa. [73]

In Sicily the North African haplotype Gm 5*;1;17; ranges from 1.56% at Valledolmo to 5.5% at Alia. [75] The hypothesis is that the presence of this haplotype suggests past contacts with people from North Africa. The introduction of African markers could be due to the Phoenician colonization at the end of the second millennium B.C. or to the more recent Arab conquest (8th–9th centuries A.D.).

Paleoanthropology

The migration of farmers from the Middle East into Europe is believed to have significantly influenced the genetic profile of present-day Europeans. Some recent studies have focused on corroborating current genetic data with the archeological evidence from Europe, the Middle East, and Africa. [28] The Natufian culture, which existed about 12,000 years ago or more, has been the subject of various archeological investigations, as it is generally believed to be the source of the European and North African Neolithic.

According to one hypothesis, [7] the Natufian culture emerged from the mixing of two Stone Age cultures: (1) the Kebaran, a culture indigenous to the Levant, and (2) the Mushabian, a culture introduced into the Levant from North Africa. It is suggested that the Mushabian culture originated in Africa, given that archeological sites with Mushabian industries in the Nile Valley predate those in the Levant. The Mushabians would have then moved into the Sinai from the Nile Delta bringing with them their technologies. The overpopulation in Northeast Africa contributed to the development of the Natufian adaptation, which resulted in agriculture becoming a new way of sustenance. [7]

From an analysis of human remains from the Natufian culture, there is evidence of Sub-Saharan influences in the Natufian samples. [5] These influences would have been diluted by the interbreeding of the Neolithic farmers from the Near East are associated with the indigenous foragers in Europe. The Sub-Saharan influences detected in the Natufian samples with the migration of E1b1b lineages from Northeast Africa to the Levant and then into Europe. [76]

According to an ancient DNA analyses on Natufian skeletal remains from present-day northern Israel, the Natufians in fact shared no evident genetic affinity to sub-Saharan Africans. [24] It was not possible to test for affinity in the Natufians to early North African populations using present-day North Africans as a reference because present-day North Africans owe most of their ancestry to back-migration from Eurasia. [24] [77] The Natufians carried the Y-DNA (paternal) haplogroups E1b1b1b2(xE1b1b1b2a,E1b1b1b2b) (2/5; 40%), CT (2/5; 40%), and E1b1(xE1b1a1,E1b1b1b1) (1/5; 20%). [24] [78] In terms of autosomal DNA, these Natufians carried around 50% of the Basal Eurasian (BE) and 50% of Western Eurasian Unknown Hunter Gather (UHG) components. However, they were slightly distinct from the northern Anatolian populations that contributed to the peopling of Europe, who had higher Western Hunter-Gatherer (WHG) inferred ancestry. Natufians were strongly genetically differentiated [79] from Neolithic Iranian farmers from the Zagros Mountains, caring up to 62% of the Basal Eurasians and Ancient North Eurasians (ANE). This might suggest that different strains of Basal Eurasians contributed to Natufians and Zagros farmers, [80] [81] [82] as both Natufians and Zagros farmers descended from different populations of local hunter gatherers. Mating between Natufians, other Neolithic Levantines, Caucasus Hunter Gatherers (CHG), Anatolian and Iranian farmers is believed to have decreased genetic variability among later populations in the Middle East. The scientists suggest that the Levantine early farmers may have spread southward into East Africa, bringing along Western Eurasian and Basal Eurasian ancestral components separate from that which would arrive later in North Africa.

The Mushabian industry is now known to have originated in the Levant from the previous lithic industries of the region of Lake Lisan. [83] The Mushabian industry was originally thought to have originated in Africa because the microburin technique was not yet known to be much older in the eastern Levant. [84] Currently there is no known industry to connect with the African migration that occurred 14,700 years ago, [25] but it no doubt caused a population expansion in the Negev and Sinai which would not have accommodated an increase in population with the meager resources of a steppe/desert climate. [7] Since all of the known cultures in the Levant at the time of the migration originated in the Levant and an archaeological culture cannot be associated with it, there must have been assimilation into a Levantine culture at the onset, most likely the Ramonian which was present in the Sinai 14,700 years ago. [85]

See also

Notes

  1. Recently, it has been proposed that E3b originated in eastern Africa and expanded into the Near East and northern Africa at the end of the Pleistocene. E3b lineages would have then been introduced from the Near East into southern Europe by migrant farmers, during the Neolithic expansion. [25]
  2. A Mesolithic population carrying Group III lineages with the M35/M215 mutation expanded northwards from sub-Saharan to north Africa and the Levant. The Levantine population of farmers that dispersed into Europe during and after the Neolithic carried these African Group III M35/M215 lineages, together with a cluster of Group VI lineages characterized by M172 and M201 mutations. [27]

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Genetics and archaeogenetics of South Asia is the study of the genetics and archaeogenetics of the ethnic groups of South Asia. It aims at uncovering these groups' genetic histories. The geographic position of the Indian subcontinent makes its biodiversity important for the study of the early dispersal of anatomically modern humans across Asia.

<span class="mw-page-title-main">Haplogroup E-M215</span> Human Y-chromosome DNA haplogroup

E-M215 or E1b1b, formerly known as E3b, is a major human Y-chromosome DNA haplogroup. E-M215 has two basal branches, E-M35 and E-M281. E-M35 is primarily distributed in North Africa and the Horn of Africa, and occurs at moderate frequencies in the Middle East, Europe, and Southern Africa. E-M281 occurs at a low frequency in Ethiopia.

Haplogroup U is a human mitochondrial DNA haplogroup (mtDNA). The clade arose from haplogroup R, likely during the early Upper Paleolithic. Its various subclades are found widely distributed across Northern and Eastern Europe, Central, Western and South Asia, as well as North Africa, the Horn of Africa, and the Canary Islands.

<span class="mw-page-title-main">Genetic history of Europe</span>

The genetic history of Europe includes information around the formation, ethnogenesis, and other DNA-specific information about populations indigenous, or living in Europe.

<span class="mw-page-title-main">Genetic history of the Middle East</span>

The genetic history of the Middle East is the subject of research within the fields of human population genomics, archaeogenetics and Middle Eastern studies. Researchers use Y-DNA, mtDNA, and other autosomal DNA tests to identify the genetic history of ancient and modern populations of Egypt, Persia, Mesopotamia, Anatolia, Arabia, the Levant, and other areas.

Haplogroup H is a human mitochondrial DNA (mtDNA) haplogroup. The clade is believed to have originated in Southwest Asia, near present day Syria, around 20,000 to 25,000 years ago. Mitochondrial haplogroup H is today predominantly found in Europe, and is believed to have evolved before the Last Glacial Maximum (LGM). It first expanded in the northern Near East and Southern Caucasus, and later migrations from Iberia suggest that the clade reached Europe before the Last Glacial Maximum. The haplogroup has also spread to parts of Africa, Siberia and Inner Asia. Today, around 40% of all maternal lineages in Europe belong to haplogroup H.

<span class="mw-page-title-main">Mechta-Afalou</span> Prehistoric North African population

Mechta-Afalou, also known as Mechtoid or Paleo-Berber, are a population that inhabited parts of North Africa during the late Paleolithic and Mesolithic. They are associated with the Iberomaurusian archaeological culture.

<span class="mw-page-title-main">Iberomaurusian</span> Archaeological culture in North Africa

The Iberomaurusian is a backed bladelet lithic industry found near the coasts of Morocco, Algeria, and Tunisia. It is also known from a single major site in Libya, the Haua Fteah, where the industry is locally known as the Eastern Oranian. The Iberomaurusian seems to have appeared around the time of the Last Glacial Maximum (LGM), somewhere between c. 25,000 and 23,000 cal BP. It would have lasted until the early Holocene c. 11,000 cal BP.

<span class="mw-page-title-main">Macro-haplogroup L</span> Human mitochondrial lineage

In human mitochondrial genetics, L is the mitochondrial DNA macro-haplogroup that is at the root of the anatomically modern human mtDNA phylogenetic tree. As such, it represents the most ancestral mitochondrial lineage of all currently living modern humans, also dubbed "Mitochondrial Eve".

Genetic studies of Jews are part of the population genetics discipline and are used to analyze the ancestry of Jewish populations, complementing research in other fields such as history, linguistics, archaeology, and paleontology. These studies investigate the origins of various Jewish ethnic divisions. In particular, they examine whether there is a common genetic heritage among them. The medical genetics of Jews are studied for population-specific diseases.

<span class="mw-page-title-main">Genetic history of the Iberian Peninsula</span> Ancestry of Spanish and Portuguese people

The ancestry of modern Iberians is consistent with the geographical situation of the Iberian Peninsula in the South-west corner of Europe, showing characteristics that are largely typical in Southern and Western Europeans. As is the case for most of the rest of Southern Europe, the principal ancestral origin of modern Iberians are Early European Farmers who arrived during the Neolithic. The large predominance of Y-Chromosome Haplogroup R1b, common throughout Western Europe, is also testimony to a sizeable input from various waves of Western Steppe Herders that originated in the Pontic-Caspian Steppe during the Bronze Age.

The genetic history of North Africa encompasses the genetic history of the people of North Africa. The most important source of gene flow to North Africa from the Neolithic Era onwards was from Western Asia, while the Sahara desert to the south and the Mediterranean Sea to the north were also important barriers to gene flow from sub-Saharan Africa and parts of Europe in prehistory. However, North Africa is connected to Western Asia via the Isthmus of Suez and the Sinai peninsula, while at the Straits of Gibraltar, North Africa and Europe are separated by only 15 km (9 mi), similarly Malta, Sicily, Canary Islands, Lampedusa and Crete are close to the coasts of North Africa.

E-Z827, also known as E1b1b1b, is a major human Y-chromosome DNA haplogroup. It is the parent lineage to the E-Z830 and E-V257 subclades, and defines their common phylogeny. The former is predominantly found in the Middle East; the latter is most frequently observed in North Africa, with its E-M81 subclade observed among the ancient Guanche natives of the Canary Islands. E-Z827 is also found at lower frequencies in Europe, and in isolated parts of Southeast Africa.

<span class="mw-page-title-main">Genetic studies on Moroccans</span>

Moroccan genetics encompasses the genetic history of the people of Morocco, and the genetic influence of this ancestry on world populations. It has been heavily influenced by geography.

The genetic history of Egypt reflects its geographical location at the crossroads of several major biocultural areas: North Africa, the Sahara, the Middle East, the Mediterranean and sub-Saharan Africa.

<span class="mw-page-title-main">Haplogroup E-M2</span> Human Y-chromosome DNA haplogroup

Haplogroup E-M2, also known as E1b1a1-M2, is a human Y-chromosome DNA haplogroup. E-M2 is primarily distributed within Africa followed by West Asia. More specifically, E-M2 is the predominant subclade in West Africa, Central Africa, Southern Africa, and the region of the African Great Lakes; it also occurs at moderate frequencies in North Africa, and the Middle East. E-M2 has several subclades, but many of these subhaplogroups are included in either E-L485 or E-U175. E-M2 is especially common among indigenous Africans who speak Niger-Congo languages, and was spread to Southern Africa and East Africa through the Bantu expansion.

<span class="mw-page-title-main">Genetic history of Africa</span>

The genetic history of Africa summarizes the genetic makeup and population history of African populations in Africa, composed of the overall genetic history, including the regional genetic histories of North Africa, West Africa, East Africa, Central Africa, and Southern Africa, as well as the recent origin of modern humans in Africa. The Sahara served as a trans-regional passageway and place of dwelling for people in Africa during various humid phases and periods throughout the history of Africa. It also served as a biological barrier that restricted geneflow between the northern and central parts of Africa since its desertification, contributing to the diverse and distinct population structures on the continent.

<span class="mw-page-title-main">Genetic history of the African diaspora</span>

The genetic history of the African diaspora is composed of the overall genetic history of the African diaspora, within regions outside of Africa, such as North America, Central America, the Caribbean, South America, Europe, Asia, and Australia; this includes the genetic histories of African Americans, Afro-Canadians, Afro-Caribbeans, Afro-Latinos, Afro-Europeans, Afro-Asians, and African Australians.

The genetic history of West Africa encompasses the genetic history of the people of West Africa. The Sahara served as a trans-regional passageway and place of dwelling for people in Africa during various humid phases and periods throughout the history of Africa.

The genetic history of Central Africa encompasses the genetic history of the people of Central Africa. The Sahara served as a trans-regional passageway and place of dwelling for people in Africa during various humid phases and periods throughout the history of Africa.

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